AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
---------->DOF2 ---------->DOF2 ---------->TaMYB80 -------->RAV1(2) ---------->DOF2 <----------DOF2 ----------->GT1
atctggaattctagaaagccaatggatactaaaagctgaatgaacaaaatggagagactttcttgggaatagccttgagtaaaaagaacccgggactccc	5922400
<----------DOF2 <----------DOF2 --------->ALFIN1 <
gagacaaaccactttcctttaacctccggtttcagcttctcttggaaagaatgaaacaacttgaaggtggtattgaaatcgttctctggaaggtcgttca	5922500
<-----------GT1 <-------GAMYB <-----------RAV1(1) <--------P ------>NtERF2 -----------GT1 <--------P <-----------RAV1(1) ------>ZmHOX2a(2) <---------ALFIN1
aataacaatcgatttctggtgggtttttactcatttgttggtatgactccatgatcgtgtaggcgattgcggacatggccaacaccgtgttttgtccagt	5922600
============================MYC_MYB --------->TGA1a =====================bZIP_DOF =============MYC_MYB ------->GAMYB <----------DOF2 ===============MYC_MYB -------->P -------->P <---------ALFIN1 <------ZmHOX2a(1) ------->TEIL
agaacaacccaagtctgccactttgatgcaaccaggaaacccatttttcagtagcatttctcttacgttctctatgaccaaaggttgtatctcatagaaa	5922700
------------ <----------- ----------->GT1 <-----------HVH21 <-----------GT1 <-----------TGA1 <-----------HVH21 <---------------AtSPL8 <-------TEIL ------------
acacttctctataaaaccccaaaaatatcataaattgtcagaccttgatttactagtacatagttattatatcatcacattcgtcagtgtttaggtacct	5922800
----------->GT1 <----------DOF2 --->AtSPL8 ------>ZmHOX2a(1) ----AtSPL8 ------>ZmHOX2a(1) ------------>CBF --->AtSPL3 ----------->RAV1(2) ---------->DOF2 ------->TEIL
gataatgtgaattagtagcataactatggtctcctgttcctcctttcattttaagagcgtccaccaaagagtccctaacgtatatatcaatgttatttaa	5922900
------------>CBF < <-------TEIL ----------->GT1 <----------DOF2 -----
tcagataaattcaaaattagaaataaaaattcataaacacacaatggtaaggttaagcatgttaatgaccttagtattagaagctttagtatatcaacaa	5923000
------------- <------------ ------------>CBF <-----------HVH21 ------------>CBF ------ZmHOX2a(1) -------->P ---------->DOF2 <---------------AtSPL8 ----->DOF2 <-----------ARR10 ---------->DOF2 ---------->DOF2 ----------->GT1
aaggatgattacaatctaatctacccatttcagctctaaagaaagagttctaaaaaacaaggaaaaagaaattatacaagtacaaagttacaattacaag	5923100
<---------AtLEC2 <-----------GT1 <--------HAHB4 -->AGL15 -------->ATHB1 ----------->GT1 <-----------GT1 ---AGL15 ------------>CBF ------->TEIL ----------->GT1 ---
aaattaatcatcccatttacttaaaatatcgaagaattcaattatttgtttgaatgaatgtaaaatttatttatagaaaaaaacggttttacaattaatg	5923200
----- ------ <-----------GT1 <------ZmHOX2a(2) -------->ATHB1 ------->TEIL <------- -------->RAV1(1) <--------HAHB4 ------->TEIL <---------
caacatagagtcgaagatcaaaaaacattttagaagaaatcaatcattaccttgagggagacatgatgttcacaatatgtatgtatcaattttctttacc	5923300

AGI:	At2g14060.1
Description:	S-adenosyl-L-methionine:carboxyl methyltransferase family protein. similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G38020.1); similar to methyl transferase [Arabidopsis lyrata subsp. lyrata] (GB:AAP57211.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299)
Range:	from: 5921527	to: 5922849	Orientation: Reverse
Links:	TAIR MIPS

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