AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
-----GAMYB <----------DOF2 <-----
ggttattggttattttggttcttaagtttagtatctatttgtttattttgaaatttcagtttcgttcggtttcggttctttcggttttaaaatttagtat	5915900
<-------GAMYB ----------->GT1 ------GT1 <-------GAMYB <-----------GT1
ccattcggttattttgttttgaacaattttggatatttcagttattgttgaatattttccaatatttttcggttattttcgagtatttttactattttat	5916000
-------->P ----------->GT1 <-------
atatattttcaagtatttttaattattttgtttagaaataacaaatagttttgaaaatattattgtagtgcggatattttaggctacccgaaatatttcg	5916100
<------NtERF2 <------------CBF ------>NtERF2 ------------>CBF --------- ----GT1 <-------GAMYB <-----------GT1 <-----------RAV1(1) <-------TEIL
gttcggcaccgatttggtttcggttatttttaaaattttcgtctcgattcggttctattatttttggtgcggttccaattggatacattcgattcggttt	5916200
*TSS ----------->GT1 ------------>CBF <----- <------------CBF <-----------HVH21 ------->TEIL ------>ZmHOX2a(1) -->GT1 ----------->GT1 <------------CBF <------------CBF ----------->ARR10
atttgccgaattgctaatcatgaactgagaggtcacaaatggtaaattgcgaacctaaacaattggcgtgtattcattcatttcccgcgtaaatcctcca	5916300
--------->O2 <---------O2 ================================================bZIP_DOF --------->TGA1a <---------TGA1a <-----------HVH21 ---------- =================================bZIP_DOF <-----------HVH21 <----------DOF2 ----------->RAV1(1) -------->P <------NtERF2 ------>NtERF2 ----------->HVH21 <---------ALFIN1 ---- ----ALFIN1 ------>NtERF2 ----------->HVH21 ----------->TGA1 ---------->DOF2 <------ZmHOX2a(2)
ccttcttcttcgccggcgttaatggaatcgccgacacagacgtctgagcacatagaatccatgacggagtttctagtaaagcactaccccgatcagctcc	5916400
->ARR10 ------>ZmHOX2a(2) <-----------HVH21 -->NtERF2 ----------->RAV1(2) ----------------------->TaNAC69(2)
gcgaaatctctctctcttctgatcccaaacttcactaccctctcttcatcgagtacgcagaactcgttgacgataatccgtctctagcgcgtcaagtttt	5916500
------->TEIL ------->TEIL --------->O2 ------>ZmHOX2a(2) <---------O2 <------ZmHOX2a(2) <---------TGA1a --------->AGP1 --------->TGA1a ---------
ctcagatcccgaacactatcttcggcaattcgacgattcagccattctagctcacgtatgtactcaattttccccaaaatttgattatacgaaatggtga	5916600
----------->GT1 --------->ALFIN1 <-------TEIL -->GT1 <----------DOF2 <----------DOF2 <------ZmHOX2a(1) <-----------GT1
tttcgattagctttgggtgtagaaaattgctttggagcatatgaagaaatttgaggagaagattggaattgagaagagatttatacatgttcgtataaac	5916700
------>ZmHOX2a(1) ------>ZmHOX2a(2) <---------AGP1 ------->TEIL <-----------ARR10 --------->ALFIN1
actagtggatctcctctagaacgaagccctggtgtgtgtgtgtgtatctcttgttttcgagtttgttctgcttctcttagctgattttgattttgacaca	5916800

AGI:	At2g14050.1
Description:	MCM9; ATP binding / DNA binding / DNA-dependent ATPase. similar to ATP binding / DNA binding / DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT1G44900.1); similar to hypothetical protein OsI_021406 [Oryza sativa (indica cultivar-group)] (GB:EAZ00174.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ76064.1); similar to hypothetical protein OsJ_019771 [Oryza sativa (japonica cultivar-group)] (GB:EAZ36288.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain MCM; (InterPro:IPR001208); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains Int
Range:	from: 5916260	to: 5920899	Orientation: Forward
Links:	TAIR MIPS

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