AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------------>AtMYB77 -------->HAHB4 ------------>MYB.PH3(1) ----------- -RAV1(2) ---------->DOF2 ---------->DOF2
taagttttaattatagttagaacttctgttagtaaagataacagttactaactcggaaatccaattttatcaaaaaaattaaatagcatctaaagttaaa	5913200
----------->GT1 -- >GT1 ---------->DOF2 <--------HAHB4 <-------TEIL
cgaggtatttttcaaatttaaaactaaagatattaaacggctaaataaaaattaggtaatcattttttgagattttttctaaaaaaaaaatatacatatt	5913300
---------->DOF2 ------>ZmHOX2a(2) ----------->GT1 <----------DOF2 ---->ZmHOX2a(1) <------ZmHOX2a(2) <-----------GT1 ------->GAMYB
cctataaatatgattcgtaacagtagattgcacagatcgtaaagaacttgatttatctttttaaaataacggtagttttgtttagccaaattttaagaaa	5913400
---------->ID1 <-----------GT1 <-----------GT1 <----------DOF2 ----------->HVH21 ---------->ID1 ----------->GT1 <-----------GT1 <----------DOF2 <----------DOF2 ----------->GT1 -------
acttgattttttctctttttttttccttttttaaattgtgactttacacatgacacaaatacaactgataaaataatttatgatttataagataaatgat	5913500
------------>CBF =====================HOX2a_HOX2a <---------------AGL15 <------ZmHOX2a(1) ----------------->AGL1 ---------->DOF2 <------ZmHOX2a(2) --------------->AGL15 ->HAHB4 <------ZmHOX2a(1) ----------->GT1 ----------->GT1
tgataaaggataagattaaggatcaaggatgtattgttttgaacaacctaaaaaatacaaaatcagcgtatttatcgttaatttcccacaatagaaaaaa	5913600
------->GAMYB ----------->HVH21 -------->P ------>ZmHOX2a(2) *TSS ------->GAMYB ----------->RAV1(1) ---------->DOF2 <---------ALFIN1 <---------AGP1 ----------->HVH21
aaaatatttaggtttgttttagcaaaattttgagaaagagacaactgaagcaccaaccgacacaagttttggatctcaaattgtgtctgcgaccgcgttg	5913700
<--------P <----------DOF2 <----------DOF2 <---------ALFIN1 ------>ZmHOX2a(1) <----------DOF2 ------->TEIL
tttccaacactttgagcaaggtaagtcctactttccggttttgatttgatttgattttagatgtctttggtttagttgtattgacaaatgtatcgatttc	5913800
------>ZmHOX2a(2) <---------AGP1 ------>ZmHOX2a(2) <--------P ------->TEIL ---------->DOF2 <------ZmHOX2a(2)
gtttatgctaatttgtgttatggttggattgtttggcatcaaatttatggatctattgtactggatttggagaataaagatagaatctttgagatctctt	5913900
---------->DOF2 <------ZmHOX2a(1) --------
gccaatttatggctatacgcttaagaaaaatcgaaactttgaaaaagtttggtagagtggaatggttttaggaacttgggagatgtttatgttttgtctt	5914000
---------->DOF2 ---------->DOF2 <--------- -->ID1 ----------->HVH21 ---------->ID1 -------->P ---------->DOF2 <-
aatcaaagcttgacactggttatgtgtgatgaagtttatgttttgtcttaatcaaagcttacccttgtaattttgttagttaaagagagagagcttttat	5914100

AGI:	At2g14045.1
Description:	similar to putative c-myc binding protein [Brassica rapa] (GB:ABL97988.1); contains domain PTHR13168 (PTHR13168)
Range:	from: 5913632	to: 5915456	Orientation: Forward
Links:	TAIR MIPS

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