AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------->GAMYB <---------ALFIN1 --- ----------GT1 === ---->GT1 ----------->GT1 <-----------GT1 <-----------GT1 <--------
taaacaacaccctgtaaggctaagaggtaatttgcaaattgtcatttttactagcatctgtattatgttttacttgtttacaaaacacaaaaattaactt	29869500
<----------DOF2 -------->HAHB4 ----- --------------->AGL15 <---------------AGL15 -------------->AGL3 ----------->GT1 <-----------GT1 <------------ ===========================================================================================MADS_MADS ---GT1 ---------->DOF2 ------->TEIL <-----------GT1 =========================
cccatatatatacaaaagataagaaatatgttatggacttatggtgttaaatctgttgattattgaccatataataacctaattatagtaaactttttgg	29869600
<------------CBF <--------ATHB1 ------>GT1 <-------TEIL -----AG <------------CBF -------->HAHB4 =====MADS_MADS <------NtERF2 <------ZmHOX2a(1)
gtaaaatttctgattacagtcaacttaatccgttttccaagggttgaaatagaggcgtagagtaattgaaggacgttcaaataattgtaaacacatctat	29869700
---------->DOF2 ------->GAMYB --------------->AGL15 > -------->P <---------------AGL15 <-
caactccaaccaaatgtaaactaatttttttttttttaatttctaaattacttgtgaaaattataaattcttgttttagaaagcattttcagtttttttt	29869800
---------->DOF2 ----------->GT1 ------>ZmHOX2a(2) >>>>>>>>MYB98 <-----------HVH21 <------ZmHOX2a(2) ----------GT1 <-----------ARR10 ------->TEIL <
ttaacataaggtttaattttcataagcgtatcatcaccatcacgcttgaagaatgctcatgatcatcgaatcaagaagaagaagatggatccaaagttgt	29869900
-------->P ----- ----------DOF2 ----------->GT1 <-----------GT1 <----------
tgctttgcttacctcaaggagatgaactgtttaatccccttaataccatgtttattcaaatggcttgcattctcgtcttctctcaattgttttatctcct	29870000
------>NtERF2 ------>NtERF2 ----------->ARR10 <----------DOF2 ->ZmHOX2a(1) --------->PCF5 <------ZmHOX2a(1) -GT1 ----------->RAV1(2) <-------GAMYB ----------->GT1 <----------DOF2
tcttaaaccctgcggccaagctggtcccgttgcccagattcttgtaaggaaatttctttcttgcgttacaagaatcacccggttttttgtagtggaaaat	29870100
<------ZmHOX2a(1) <-----------------AGL1 ------>ZmHOX2a(1) ---------->DOF2
gtctaacaagtttttgttttgttatccatattggatattttttaggctgggattgtgttgagtcctgttttgctctcaagaatacctaaagttaaggaat	29870200
------>ZmHOX2a(2) ------>ZmHOX2a(1) <---------AGP1 ----------->RAV1(1) <----------DOF2 --------->ALFIN1 ------>ZmHOX2a(1) <-----------GT1 ------>ZmHOX2a(1)<----------DOF2 ------>ZmHOX2a(2)
tcttcctccagaaaaatgcagcagattattactccttcttctccttcgctttacggacatctttcatgttcttgatcggtcttgaagtggatctacattt	29870300
------>ZmHOX2a(1) <<<<<<<<<NAM ----------->GT1 ------>NtERF2 ========================= ---------->DOF2 ------>NtERF2 ------>ZmHOX2a(1)<-------
catgagaagaaatttcaagaaagctgcggtgataaccttgagctcattcgtggtttccggcctcctcagtttcgcttccttaatgttattcatccctttg	29870400

AGI:	At1g79400.1
Description:	ATCHX2 (CATION/H+ EXCHANGER 2); monovalent cation:proton antiporter. similar to ATCHX1 (CATION/H+ EXCHANGER 1), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT1G16380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67417.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153)
Range:	from: 29869885	to: 29872733	Orientation: Forward
Links:	TAIR MIPS

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