AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------>NtERF2 <------- ------>NtERF2 <------NtERF2 <------ZmHOX2a(1) --------------->AGL15 ------>ZmHOX2a(1)------>ZmHOX2a(1) ----------->GT1 <-----------HVH21 <-----------GT1 ----------- ---------->DOF2 -------->P ------>ZmHOX2a(1)<---------------AGL15 <--- -------->DOF2 <-------TEIL ----------->HVH21 <----------DOF2 ------>NtERF2
atgaagcaaagtaataaactcattatcagcagctgcatcaaaactaggcctaaccggtctcctcctcccagaacttttctccttataggacgccgacacc	25517800
<-----------HVH21 <-----------TGA1 --------->O2 ============================RAV ----------->HVH21 ----------->RAV1(1) --------->TGA1a --ALFIN1 ----------->RAV1(1) ------>NtERF2 <-----------TGA1 >HVH21 <------NtERF2 ------->GAMYB ----------->HVH21 <-----------RAV1(2) --------HVH21 ------>NtERF2 <-----------RAV1(2) ------>NtERF2 <-----------HVH21 ------>NtERF2
gtcaatgacggatacggcgtcggaatcgcaacaggcgttgtagcttgctccgccgacaaaaaaccaccgtcagccgaaacgtcagacatctccgactact	25517900
------>ZmHOX2a(2) <------ZmHOX2a(2) <-----------ARR10 <-----------RAV1(2) =============HOX2a_HOX2a ------>ZmHOX2a(1) ==============HOX2a_HOX2a <---------ALFIN1 <---------AGP1 ----------->RAV1(1) <------ZmHOX2a(1) ---------->DOF2 <------ZmHOX2a(2) =============================RAV <-------TEIL
ccgatctaaattccttccgattcaacaacacatcaaaattcctcaggatctatacacactcagatgcaaacaaaaaagtagcttcaaaatgcagatttct	25518000
<----------DOF2 ------>ZmHOX2a(2) <------ZmHOX2a(2) ---------->DOF2 ------>ZmHOX2a(2) <------ZmHOX2a(1) ----------->RAV1(1) <------ZmHOX2a(2)
agagaggatccaaatgcttttctctgggatttcaaatcagagtctcaacaacatatctagagagaaagagatagtttcagagagatcgttcgtttttttt	25518100
<----------DOF2 ----------->HVH21 <-----------GT1 <-----------HVH21 *TSS<----------DOF2 -
tttttttttgtagtgatggaaacaagagagagagtgagatttaaatgctgtcacagtgttgttgtttatctttctttctctagtcgtcttctctaatagc	25518200
<----------ID1 ----------->GT1 ----------->HVH21 <----------ID1 <-------GAMYB -------->ALFIN1 ----------->GT1 ----------->GT1 <-------TEIL <-
aagtgtgacaagacaagaagagggaaaaaaaacaaagattagattaggttgttaattaatcaacgttcacttgatcaagcacttaagtatgaaatataga	25518300
<-------GAMYB ----------->GT1 ----------->GT1 ----------->GT1 ----------->GT1 ----- -------P ----------->GT1 ------->TEIL --------->ALFIN1 <--------P ----------
ggttagtaattataatatagtaaatggcaatattgtatgtatataatttaggtggatggttaattattttggttagtgatgtgattagcgtagaaaagat	25518400
<------ZmHOX2a(1) ------------ ------>GT1 <----------DOF2 ----------->GT1 <-------TEIL >DOF2 ---------->DOF2 <-----------HVH21 <----------DOF2 <-----------RAV1(1) <-----------
gtgattagtcaaagagatgctttgcgcgtgagaggagggaacgtgtaatatgtctttttttttttttttttttgttgttgttaactaaatacgtgtacac	25518500
<----------DOF2 --------------->AGL15 <---------------AGL15 =============================================================== ---------->ID1 <-----------GT1 <----------DOF2 --->AtSPL8 ------>ZmHOX2a(2) <----------DOF2 <- ----AtSPL8 <------ZmHOX2a(2) ------->TEIL <-----------GT1 --
taatctaatcactgtaatctgttgagatctctttgtttttctttttgagggacaatcaattatgtatgttttctcttttaacaaatttgattgattctct	25518600
------>ZmHOX2a(1) <----------DOF2 ---------->DOF2 ==============MADS_MADS --------------AGL15 ------------->AGL15 ----------->GT1
actaataaaagtccttttaaattgttatgagaaacaaaaaaaatctatttaaattgaatgtaaatcaatataatgtttcgttttttgaatatcactgcca	25518700

AGI:	At1g68060.1
Description:	ATMAP70-1 (MICROTUBULE-ASSOCIATED PROTEINS 70-1); microtubule binding. similar to ATMAP70-2 (microtubule-associated proteins 70-2), microtubule binding [Arabidopsis thaliana] (TAIR:AT1G24764.1); similar to ATMAP70-4 (microtubule-associated proteins 70-4), microtubule binding [Arabidopsis thaliana] (TAIR:AT1G14840.1); similar to ATMAP70-3 (microtubule-associated proteins 70-3), microtubule binding [Arabidopsis thaliana] (TAIR:AT2G01750.1); similar to hypothetical protein OsJ_008022 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24539.1); similar to hypothetical protein OsI_008672 [Oryza sativa (indica cultivar-group)] (GB:EAY87439.1); similar
Range:	from: 25514604	to: 25518163	Orientation: Reverse
Links:	TAIR MIPS

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