AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------>ZmHOX2a(2)
ggatatggatatgggatcgtctaagctcagtgaatgaaaccaatgactagtgtactatattggtttgtaagaattttattggcttaaaacccatctatta	25506100
----------- ---------->DOF2 ----------->GT1
tagttgcaccaaaaaagaaaacaatgaattccactccaatgatgattctccctagctagtagagtagtagctagtctataacttatagtaataagattct	25506200
----------->TBP <---------------AtSPL8 --------------->AtSPL8 ------------>CBF <-----------GT1 >ARR10 <------------CBF <------------CBF <----------DOF2
tacttattagataattggccatcttaagtgatttgaagaacaaatttattgattacaattaaaaaaattgtactatatattcgaacttattcttttcaaa	25506300
<----------DOF2 <---- <------------CBF ------->TEIL <-----------GT1 ------->TEIL <-----------TBP --------->ALFIN1
aaatatttttctacattgtactttgatttgtgtatgtgtgatagcaaattcttgtattaatttcttgtttttatacgcatataatcgcgtgtgtgtatgt	25506400
----------->GT1 <------------CBF -------->ATHB1 <--------ATHB1 ------------>ATHB5 <---------AtLEC2 ------------>CBF ------------>CBF <-------TEIL -------RAV1(1) ----------->GT1 ---------->DOF2 <--------P ----------->TBP
gttgtatagttcaattcaagagggtttcaattattgttaaagtaaatataatatcaagcactacgtggtaagtgcatggcctatataaatgataggcgag	25506500
---------->DOF2 <----------ID1 --------->ALFIN1 ----------->GT1 ------>ZmHOX2a(1) ---------->DOF2 ---------->DOF2 --------->ALFIN1 <------------MYB.PH3(2)
acatagccaaagtatagacgcaaatcaaaaaaagtataatgggaaaagtggagattgttcgtaactcacttcctatgagtgggggagatggtccgaacag	25506600
<-----------GT1 <-----------GT1 <----------DOF2 <---------AtLEC2 <----------DOF2 <-----------GT1 --
ctactctaagaattctcatttgcaggtctattttcagagcttttattccatttttctatattttttttcttatctttatttttttttttcttccactatt	25506700
<---------AtLEC2 <----------DOF2 ---------->ID1 ---------->DOF2 ------------->AtSPL8 --------->AtLEC2 ----------->GT1 ---------
gtttgttctttttttcatggttcccaattagtgatgcaaaaaaaaaaaaaaaacttgcaggtagaaaaaaaagtgtatgattactgaataattttaaaga	25506800
----------->GT1 ---------->DOF2 <-----------GT1 ---------->DOF2 ->DOF2 ----------->GT1 <--------HAHB4 ---------->DOF2 <----
gataagagatagtaaagaagcggtatgagattacggaataattacaaaatatctgataaatgttctaaatactaaagaaagataaatggaatcatgtttt	25506900
<----------DOF2 ---------->DOF2 ----------->GT1 <-------TEIL <-------GAMYB -------GT1 ----------->GT1 ----------->GT1 <-----------GT1 ----------->GT1
tcaatatgaataaatagtagaattgaaagaaacgaaaattgtagagttataacttttcaggttcatcatattataattgagttcggttatttggatatta	25507000

AGI:	At1g68040.1
Description:	S-adenosyl-L-methionine:carboxyl methyltransferase family protein. similar to methyltransferase-related [Arabidopsis thaliana] (TAIR:AT5G38100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42374.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299)
Range:	from: 25506539	to: 25508895	Orientation: Forward
Links:	TAIR MIPS

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