AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<---------ALFIN1 ------->GAMYB <----------ID1 --------->ABI4(2) <------------MYB.PH3(1) ---------->DOF2 ----------------->AGL1 ---------->GT1 ------->TEIL <-----------------AGL1 <------ZmHOX2a(2)--------
cttcgttaaacccggtgcacccggtttcagttccgataacggtatctagaaaacgaagaatcaagcaatctaagtaagatcaagaaaccacattgaaaag	25504800
<-------TEIL <-----------GT1 --------------->AtSPL3 <-------TEIL <------ZmHOX2a(2) --------------->AtSPL8 <---------------AtSPL8 ====================HOX2a_HOX2a -->DOF2 <---------------AtSPL3 --------------->AtSPL8 <------ZmHOX2a(1)
gaaatgaaagattagtacctcatctaagatacattggagtacatattcacagctctcagaggaatcaaactcgatcattgaggtagtagtagtagtagta	25504900
-------->P ---------->DOF2 ---------->DOF2 ----------->HVH21 <------ZmHOX2a(1)
gtaacagaaacaacatgagaatcaaacaaagaagctaggcatctgaaagctaccatctcatttgtatattcacccaaataatctggaagcttaggagcca	25505000
<-----------GT1 ---------->DOF2 ---------->DOF2 <-----------GT1 ---------
attcaaagacatcttgcaataataaaacaaaatctcagaaattgaaatttcaaagaaactgatgcaattaaaaattcaattaccatttaacatccaaagc	25505100
<------ZmHOX2a(2) <-----------HVH21 --------------->AtSPL8 ---------->DOF2 ->DOF2 ---------->DOF2 <-----------HVH21
tcagttttgaatttggcaaagtactcaataatccaaatccagttatcaaggtctaaattcccagtcacaaagcgatcacagacactgtttgaattcggag	25505200
----------->GT1 ----------->GT1 ------- ----------->HVH21 <-------TEIL ----------->GT1 <
gctccatcatcgacacgaataaaatagcagctgttgacagagacggaaaaatcagtcttcagattcgtgaagagaaccaaaaaaaatagaaataaaatcg	25505300
<-----------GT1 <----------DOF2 -------->AtSPL3 ------->TEIL ------->GAMYB ----------DOF2 --------------->AtSPL8
tactttccgagaaaaatgaaacacaagtgtacctcttttttctcaacggagagaatttgaagactgaatagctctctctcgctggagaccgccaaatttg	25505400
------>ZmHOX2a(2) <------ZmHOX2a(2) <--------ATHB1 ----------->ARR10 <------------ATHB5 ---------->DOF2 ------------>CBF ---------->DOF2 <----------DOF2 ------>ZmHOX2a(1)
cagaattcaagcaagcactggagaaatttcacttgtgttgagaaagatgagcgttttctttcccagaaagatcctaggcccaagcccaataataggccca	25505500
<-----------GT1 <<<<<<<<<MYB98 <----------DOF2 ---------->ID1
tagcgttttctgatatgttcttaagttaggcagaatagcgttttattttaccaaaattttatttggttcagttatctgcttgttctattatttttgttta	25505600
---------->DOF2 -------->HAHB4 <--
tataacaataacatatctcttattaattatgaaagaatcaagaaacgcattgatagagatataaacagagatttatgtttataaacatatattttggcat	25505700

AGI:	At1g68030.1
Description:	PHD finger protein-related. similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G14770.2); similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G14770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80644.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011)
Range:	from: 25504041	to: 25505207	Orientation: Reverse
Links:	TAIR MIPS

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