AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<---------ALFIN1 < <-----------GT1 ----------->GT1 <--- ---------DOF2 <-------TEIL <----
tctttttccacccttcgatatatcttcatcggacgattcaaattctcaaatatatactcatgctctcgttggatacattaattgttataagttgggtttt	25500600
----------DOF2 --------GT1 <-------- -------GT1 ------>ZmHOX2a(1) ----------->GT1
aacttttaaaatgaacagtttttcatatttgggtgtgtatttttcagatatataaattccaactcctgttataaatttatgtaaacatcgttattaacac	25500700
---------->DOF2 ---GT1 <----------ID1 <-----------GT1 <---------ALFIN1 ----------->GT1
taagagacgcacaagctctgtctgagaaaaaaaacaaaaagctaaactattttcattataattccaatctcacacgcaaaaaccttagaaacagaaaata	25500800
----------->GT1 <-----------GT1 --------->ALFIN1 ---------->DOF2 <----------DOF2 ---------->DOF2 ---------->DOF2 <----------DOF2 ---------->DOF2 -----------
tatctgtctgaagaaaaagtgccggtaataagaaagaaagaatcacctttctctactttgtttttaatttcaaaagcattttctcatgaagacagtcaaa	25500900
*TSS <----------DOF2 <----------DOF2 <---- <----------DOF2 <---------ALFIN1 ------>ZmHOX2a(1) <----------DOF2 >GT1 ---------->ID1 <-----------GT1 <-----------GT1 ----------->GT1 ------->TEIL <----------DOF2
aaatctctttttgtcttctcaaatttaaacctcacctttaatatttctccttacttttgaagctgtaataatattcttgaatctattcctttctttctct	25501000
--------------->AGL15 <---------------AGL15 ----------------->AGL1 <----------DOF2 <----------DOF2 <----------DOF2 ----------------->AGL3 ------DOF2 ----------->HVH21 <----------DOF2 ---------->DOF2 <----------DOF2
ttctcatgtttaatcggtgaaggctttactctgtttctttcatcatgtttcaatcaaaagccttaactttttctttagctctttccattacaagagacct	25501100
<-----------RAV1(1) ------>ZmHOX2a(2) <----- ==================================== <----------DOF2 <------ZmHOX2a(2) <-------- <-------TEIL <----------DOF2 ----------->GT1 ========================
ctagcttcatactttttataaaaattctctctttttctcagtttaatctcaagaaatggtttcaagatcgtattcaaatctgttggagttagcttcagga	25501200
-ZmHOX2a(1) =HOX2a_HOX2a ===== ---RAV1(2) <----------ID1 <-------GAMYB <-----------HVH21 ----- ===RAV ------->TEIL ----------------->AGL1 ---------->DOF2
gactcaccaacgtttggacgcatgaaccgacaaatcccacgaatcatggccgttgctggaatcatgtcaaacatcgataatgactctaaagacactgatc	25501300
------>ZmHOX2a(2) <------ZmHOX2a(2) ---------->DOF2 ------>ZmHOX2a(1) ==============HOX2a_HOX2a =============HOX2a_HOX2a ==== ==========HOX2a_HOX2a ---- ->ZmHOX2a(2) <--------P <---
tgtctcctaaagatcgtatcatcattgtagccaatgaattacctatacgagctcagagaagggttgatggtaatggtagtggtagtagtagtagtagtac	25501400
<--------P ===================================MADS_MADS <------ZmHOX2a(1) ----------->AGL15 <----------DOF2 <-----------GT1 <<<<<<<<<MYB98 <-- ------------AGL15 <-----------------AGL3 ---------->DOF2 ------->TEIL <-------
ttgttgtagcaaaggttggaacttttcttgggatgagaattcacttcttctccaattgaaagatgggttaggagatgaagctattgaagttatctatgtt	25501500

AGI:	At1g68020.1
Description:	ATTPS6 (Arabidopsis thaliana trehalose phosphatase/synthase 6); transferase, transferring glycosyl groups / trehalose-phosphatase. similar to ATTPS7 (Arabidopsis thaliana trehalose-phosphatase/synthase 7), transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] (TAIR:AT1G06410.1); similar to ATTPS9 (Arabidopsis thaliana trehalose-phosphatase/synthase 9), transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] (TAIR:AT1G23870.1); similar to ATTPS5 (Arabidopsis thaliana trehalose phosphatase/synthase 5), transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidops
Range:	from: 25500953	to: 25504037	Orientation: Forward
Links:	TAIR MIPS

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