Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------AHL20(2)                                                                 <---------AHL20(1)                                                                --------->YAB1                      <---------ARR14(2)                        --------->AHL20(2)                     --------->GLK1(1)                         <---------YAB1                       <                     <---------GLK1(1)                      <---------YAB1                          -                     <----------TaMYB80              <---------ANAC58                               <                    --------->ARR11(3)               <---------ANAC58                            ----                    <---------ARR11(3)               <---------ANAC46                      <------ZmHOX2a(2)          --------->AHL20(2)                     <---------ANAC58<---------AHL20(2)       --------->ARR11(3) ----->TEIL         --------->ARR14(2)           <---------ANAC58--------->AHL20(2)       <---------ARR11(3) ----------AtSPL3   ---------->TaMYB80          --------->STY1(2)--------->AHL20(1)   ------>ZmHOX2a(1) --------->AtSPL8   <---------ARR14(2)       xxxxxxxxxxxxxxxx>smallRNA(s)            --------->TOE1(2) ----------AtSPL8  <------ZmHOX2a(1) <---------MYB46(3)--------->ALFIN1              --------->TOE2(3)   gtacttcccaaataatatgtaggatatccctctatacgtttgatggccctagcttgagtgtgactattatattatggacgcttacatcctaagatcatgt  22997800                 --------->TOE1(2)      <-----------GT1    --------->AHL20(2)    ----------->GT1    --------->YAB1     --------->CCA1(2)                                        <---------At4g35610   <---------YAB1--------->TOE2(2)                                        <---------ICU4 --------->YAB1  --------->TOE2(3)                                        -------->HAHB4 ---------AHL20(2)    <---------ARR11(3)                                  <--------ATHB1 -------->AHL20(2)    --------->ARR11(3)                                 --------->ICU4 ---------YAB1   <---------MYB59                                         <---------ATHB51           - --->TEIL     <-----------GT1            <---------ATHB12                <---------YAB1  ---------->DOF2   atataattatacatttttacctaagatatagtaaatctagccaaacatgcttaattctattgacaattgtatgtaataattcagcatatgagaaagaact  22997900                                              <-----------GT1                                             <---------YAB1                                           --------->YAB1               --------->ANAC46                                          <---------YAB1                <-----------GT1                                     --------->At4g35610         <---------ARR11(3)                                   --------->ZAT14               --------->ARR11(3)        --------->ARR11(3)                                   <---------ZAT14              --------->RVE1(1)          <---------AHL20(1)                       <---------MYB59 <---------YAB1           --------->CCA1(1)          <---------ARR11(3)  ------>ZmHOX2a(1)  ------->TEIL <---------MYB52(1)      --------->TOE2(3)                --------->AHL20(1) ----->ZmHOX2a(2) --------->HSFB2a(2)<---------At4g35610  --------->TOE1(3)    >>>>>>>>>EIN3   gatcctagcccaaaaaatgtctggacctaaaactcagtttgctgattataacaaaacaaaccctaaatatctatacactatacattgtcgaaatatatca  22998000                                                      <---------YAB1                                                    --------->YAB1                                                    <---------ICU4                            -------                           --------------->AGL15  --------->ARR11(3)                          -------                        --------->ARR11(3)      --------->ICU4                                -------                        <---------ARR11(3)  --------->TOE2(3)                                 -------                       <---------CCA1(2)   <---------ANAC55(2)                             <---------ARR14(2)             <---------MYB52(1)            ----------->GT1--------->ZAT6       ----------->GT1-------       <---------SPL7 --------->AHL20(1)   --------->ANAC55(2)                 <------MYB46(1)<------      --------->YAB1  <---------AHL20(1)   --------->ANAC46                    <------MYB83--------->ARR14(2)     <---------YAB1   --------->ARR11(3)   --------->ANAC58                   --------->MYB59<-------TEIL    <---------ARR11(3)<---------AHL20(2)   --------->ANAC58                   --------->MYB46(2)    --------->ARR11(3)<---------ARR11(3)   --------->ANAC55(1)     <---------ZAT6        ------->TEIL   tttgaatatcatacggtttgctaatatatcttatttgagaacaatacgtaaaaatcatgaatactactactgttgaaagttaggttaaatgaatatacgt  22998100        --------->ICU4   ----------->GT1 -->ANAC55(1)                        >>>>>>>>>MYB98 -->ANAC58                  --------->WOX13(1) -->ANAC46  <---------AHL20(2)   --------->ANAC55(2)                <---------AHL20(2)    ------->TEIL -->ANAC58  --------->AHL20(2)   --------->ANAC58                  --------->AHL20(2) ------->TEIL -->ANAC55(2)      ------->TEIL  --------->ANAC46         <-------MYC3            ------->TEIL------- ---ANAC55(2)<---------AHL20(2)  --------->ANAC58         ------->MYC3     <---------AHL20(2)--------   aatctaggtaaaaattaaatgaatttaagtcattcaagtaacatataacaaatacaaacacgttgtatattatatatgtaaatgtatgtatgtatgtggt  22998200                                                                                                 ----                                                                                         ---------->DOF2   --------->AHL20(2)                                                                   <---------AHL20(2)   <---------AHL20(2)  -------->HAHB4                                                   --------->AHL20(2)   ----------->TBP     --------->YAB1                                               <---------RVE1(1) ----------->TBP      <---------ATHB12          *TSS                                <---------CCA1(1) ---->GT1             --------->ICU4          --------->ANAC58                     --------->ARR11(3) ->ALFIN1 ------------>CBF  <---------ANAC46  --------->ANAC58                     <---------ARR11(3)   gatatatatatagccaatggcctaatgatgctgtgaacaaaaactcacaagaaaaaaaaaaaaactcacatttttgtgtttcagagatatttaaagaaaa  22998300                                                                     --------->At4g35610                                                                 --------->ANAC58                                <---------TOE2(3)            ------>NtERF2                                <---------YAB1              <---------ANAC46                             --------->ICU4                 <---------ANAC58                             <---------YAB1                 <---------ANAC58    <----------DOF2                          --------->ICU4                   <------NtERF2        <---------DAG2                   <---------ANAC58                      <---------DEAR3(1)  ========================                   <---------ANAC46                   <-----------RAV1(1)    ========================      <---------GLK1(1)   <---------YAB1      <---------ANAC58   --------->ANAC58 ------>DOF2       <---------ANAC58           <---------ANAC58<------NtERF2  <------ZmHOX2a(1)   aaagatggaaatcactaagttgcttgtggtgattatcgttggactagtgagtgccaatgttggcgcgaggcaactccaaggacttttcgaaaacacaaaa  22998400                                                           --------->ALFIN1                                                           <---------ANAC46                                                        --------->ALFIN1                                               --------->ALFIN1                                             <------MYB83<---------MYB46(3)                                             <------MYB46(1)                                             <---------ANAC46                               ---------                                            --------->MYB111(2)                           ---------->DOF2                                            <---------AtMYB61                         ---------------                                            --------->MYB111(1)                       <--------------                                            --------->ALFIN1                         ----------------                                            <---------DEAR3(1)                       <---------------                                           <---------ABI4(1)    <------ZmHOX2a(1)    <---------------                  <---------MYB46(3)  --------->ALFIN1<---------MYB46(3)             ----------------      ------>ZmHOX2a(2)              <----------CDC5 <---------DEAR3(1)           <---------SPL7     <------ZmHOX2a(2)              ------>NtERF2 <---------AtMYB61             <---------------AtSPL8    <---------ARR14(2)              --------->At4g35610 <---------DEAR3(1)      --------->ALFIN1    --------->ARR14(2)              <---------At4g35610 <---------AtMYB61       <---------------AtSPL3 ============HOX2a_HOX2a          <---------RAP2.6(2)--------->ALFIN1     <---------REM1(1)--------->DAG2 ===========HOX2a_HOX2a         <-----------RAV1(1)  <---------AtMYB61 <---------ZAT6----------------   ttgttggatccaaaattcgatggtgagccaatttgtgccgctgggggaggtggaggtggtggtggaggagctagtgttgaaggtggtaccgaaaaaggta  22998500                                                                    --------->LBD16                                                                   <---------HSFB2a(2)                                                                   --------->HSFB2a(2)                                                                  <---------LBD16                                                           ------>NtERF2                                                          --------->RAP2.3(3)                                                          --------->DEAR3(1)                                                          --------->DREB2C(2)                       -                                                         <------NtERF2                              <                                                         --------->ATERF1(1)                     ----                                                         --------->DEAR4(2)                      <---                  <-------TEIL                           --------->RAP2.3(1)                   <----- >DAG2            --------->SPL7                         --------->ORA47(2)                   <------ >AGL15         <---------SPL7                           --------->DEAR3(2)                   <------ -AGL15         <---------ARR14(2)                      <---------ATERF1(1)                   ------- ->AGL1         --------->ARR14(2)                      ------>NtERF2                      <---------AtMYB61 --AGL3       <---------------AtSPL3                  <---------ABI4(2)        <-----------RAV1(1)<-- --AGL1       <---------------AtSPL8                  --------->ATERF1(1)      <---------MYB46(3)<--- ->AGL3    --------->MYB52(1)                        <---------ATERF1(1)<------NtERF2   --------->ALFIN1 ->AG---------->DOF2                           <---------AtLEC2<-----------HVH21     <---------AtMYB61   tcgacgataatgcaaacgggtacggagatgggaatggaaatgggaatgcgcatggacgcgccgactgtcccggaggcatagttgttggaggtggaggtgg  22998600                                  ------>NtERF2                                 <---------RAP2.6(2)                           <---------ARR14(2)                           --------->GLK1(2)                         <---------DEAR3(2)                        <---------ANAC58                        <---------DEAR3(1)                        <---------RAP2.6(2)                     <---------AtMYB61                    <-------GAMYB<---------ATERF1(2)                    <---------ABI4(1)                    <------NtERF2--------->ATERF1(2)                    --------->ATERF1(1)                   <---------DEAR4(2)                   <---------MYB46(3)         <---------DEAR3(1)--------->ARR14(2)         --------->ALFIN1<---------MYB46(3)         <---------AtMYB61<-------GAMYB        <------NtERF2----------->HVH21      <---------ANAC46 <------NtERF2      <---------DEAR3(1)<---------ANAC46      --------->ALFIN1------>NtERF2<------NtERF2     <------NtERF2 <---------ORA47(2)     --------->ATERF1(1)<---------ANAC58   <---------DEAR3(1)--------->ALFIN1  --------->ATERF1(1)<---------DEAR3(1) -------->ALFIN1   <---------ATERF1(1) ---------ANAC46  <---------DEAR3(1) ----->ALFIN1     <---------DREB2C(2)        <--------P                 <---------ARR14(2) ------DEAR3(1)   --------->ALFIN1<---------ERF1                    --------->At4g35610 ----MYB46(3)    <---------ABI4(1)<---------RAP2.3(1)               <---------At4g35610      <------- ---DEAR3(1)     --------->ATERF1(1)       --------->YAB1      --------->ALFIN1   --------->YAB1 ---AtMYB61    <---------DEAR3(1)<---------RAP2.3(3)          --------->At4g35610<---------TOE2(3) -->ALFIN1  --------->ALFIN1     <---------DEAR3(1)   <---------AHL20(2)--------->ARR14(2)   <------- -------MYB46(3) <------NtERF2  --------->RAP2.6(3) <----------DOF2 <------NtERF2<---------YAB1    <- ------AtMYB61--------->ATERF1(1)<---------RAP2.3(2)--------->TOE2(3)  <---------SPL7  <---------ZAT6   tggtggaggcggaggtggaggcggtggcggttctggcggcagtaatggtagtttctttaatggcagtggcagcggtactggctatggtagtggtgatggt  22998700  Previous    Next  AGI:  At1g62240.1    Description:  contains InterPro domain Eggshell protein (InterPro:IPR002952) Range:  from: 22998248    to: 22999136    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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