Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            -----------                                                                                        <---------YAB1                                                                                      <---------AHL20(2)                                                                                     --------->AHL20(1)                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                     <---------AHL20(1)                                                                                 --------->AHL20(2)                            --------->AHL20(2)                                   <---------YAB1                           <---------AHL20(2)                                    <---------AHL20(2)                     ----------->GT1                       <---------AHL20(2)   <---------AHL20(1)                    <---------ZAT6                    <---------YAB1            --------->AHL20(2)                 <-----------GT1                  <---------ARR14(2)       --------->AHL20(2)              <---------------AGL15               --------->ARR14(2)       <---------AHL20(2)            <---------AHL20(2)            <------MYB83------>ZmHOX2a(1)   --------->AHL20(2)           <---------AHL20(2)             <------MYB46(1)  --------->AHL20(2)   --------->AHL20(1)  -           <---------AHL20(1)            --------->MYB59  --------->AHL20(2)   --------->YAB1       - -------GT1--------->AHL20(2)         <---------ARR14(2)  <---------AHL20(2)  XXXXXXXXXXXXXXXXXXXX>MIR867   accaaaaaaacaattaattttactggtaaataatatgacatatttggtcccaaatcctaattaaattctatgtcaatttaaatataatttattagtaaaa  22626200                --------->ARR11(3)                --------->ARR14(2)             --------->ANAC55(2)             <---------ANAC55(2)      <---------ICU4                --------->AHL20(2)      --------->AHL20(2)      --------->YAB1 >GT1 --------->YAB1   ----------->RAV1(1)  ---------->DOF2                       --------->ANAC58 -------->YAB1  <---------ARR14(2)  <---------AHL20(2)                            --------->ANAC58<-- ---------->GT1<---------CCA1(2) <---------ICU4     ----------->GT1             ---------->DOF2  ----   aatggtaataatatcacatatctggcaacaattcataatttaaaacaaaagaagaagtaaatctactattttgtcaagtttggaaagcaaatgtaagatt  22626300                                --------->ATHB51                                --------->ATHB12                                <---------AHL20(2)                            --------->AHL20(2)                            <---------AHL20(2)                        --------->AHL20(2)                                  <---------AHL20(2)                        <---------AHL20(2)                                <---------AHL20(2)                       <---------YAB1                                    <---------AHL20(1)              <---------TOE1(3) --------->AHL20(2)                       --------->AHL20(1)              <---------TOE2(3) <---------ICU4                         <---------AHL20(1)             ---------->DOF2<---------AHL20(1)                         --------->AHL20(1)        --------->AHL20(2)  --------->AHL20(1)                <---------AHL20(2) <----------ID1     <---------YAB1                --------->AHL20(2)  --------->AHL20(2) -------TOE2(3)   ----------->GT1        ------------>CBF    --------->AHL20(2)                 ----- ------>DOF2<---------AHL20(2) --------->ICU4  <---------ANAC55(2)--------->AHL20(2)          -------   aaagaaacaaatatttaaagttgttattaattaattatttgataacaatacataaaatatagattaaatcaaatatatatttttggagaaaaacatttac  22626400                             <----------DOF2                             <---------------AGL15                          -------->P                             --------------->AGL15                          --------->ANAC58                            <-----------------AGL3                          --------->ANAC58                          <-----------GT1                                 --------->MYB46(3)                       <---------AHL20(2)                    --------->ARR14(2)                    <---------ARR11(3)                       <---------ARR14(2)                    --------->ARR11(3)                       <---------ARR11(3)                    <---------AHL20(1)                       --------->ARR11(3)                  <---------AHL20(1)                       --------->AHL20(1)                  --------->AHL20(1)                       --------->ARR11(3)   <---------MYB59<---------ARR11(3)             <----------DOF2   ------->TEIL           <----------   --------->TOE2(3)--------->AHL20(1)    --------->AHL20(2)<---------CCA1(2)          ------------>CBF ------>TBP       --------->ARR11(3)      ------------>CBF <---------ARR11(3)   --------->LBD16 -->AHL20(2)     --------->YAB1     <---------TOE2(3)      <---------AHL20(1) ------->GAMYB   atataccttacatagccaaaaatatttttttctttattaagaaattcaatacttttcaaaatatatctgcatctaaacaacccagaaacaacaattgact  22626500                                          ----------->RAV1(1)                                         <----------ID1                                       --------->ANAC46                                       --------->ANAC58                                    <---------                                     ---------->DOF2                                    <-----------GT1                 <---------ALFIN1<------------CBF                                   <---------ICU4 ----------->TBP------->GAMYB  --------->REM1(1)                                    --------->ATHB51 <---------AHL20(2)           ------------>CBF                                   --------->YAB1  ---- --------->AHL20(2)----------->RAV1(2) --------->ANAC58              <-------TEIL--------->TOE1(3) --CBF         <---------ALFIN1<---------YAB1    <-------TEIL   >>>>>>>>>>GT-3b  --------->TOE2(3)   aatataaataagtttcaacacacctgttttgctacaattgaaagcaacaaattcatactttgtaagaaaaatacatagccaaaccataattttcttttcc  22626600                                                                                                 <---                                                                                                 <---                                                                                            <------MYB46(1)                                                                                            <------MYB83                                                                                            <--------                                                                                           <---------MYB46(3)                                             --------->HSFC1(2)                            --------->MYB111(1)                                             <---------HSFC1(2)                            --------->MYB111(2)                                          --------->At4g35610                              --------->MYB55(2)                                --------->YAB1                                             <---------AtMYB61                   --------->GLK1(1)      <---------At4g35610                              --------->ALFIN1     --------->TOE2(3)         <------ZmHOX2a(2)                ------->TEIL <---------GLK1(2)   <--- -DOF2            <------ZmHOX2a(1)   <-----------HVH21    <---------At4g35610      <---------At4g35610 ----->LBD16      ====================HOX2a_HOX2a          --------->At4g35610      --------->At4g35610   gaagtaatctaaactagagaggaatccatcgcgatcaaaatgtcagaagcgtctaataagcagatgaaactcatcaaaagattgtctgatgagttggtgg  22626700                                                                      ------->MYC3                                                                      <-------MYC3                 <-  ------->TEIL                                                  <----------ID1               >>>>>>>> ------ANAC58                         <---------ALFIN1     --------->CCA1(2)           ------>NtERF2 ------ANAC58                    <-----------GT1          --------->ARR11(3)         ----------->HVH21 -MYB46(3)                     <----------DOF2            <---------ARR11(3)--------->At4g35610    <- ------ANAC46                  <---------DAG2     <---------------------WRI1<---------At4g35610    --   agtgcatcttgtcatttcttccagtccaatctactttacaacaccgtgttttgtcgaagagatatagggacacatggaagctatctcgcgacctcgattt  22626800                                          --------->YAB1      --------->ARR11(3)                --------->ANAC58                            --------->ETT(2)      <---------ARR11(3)                --------->ANAC58                            <---------ETT(2)      --------->AHL20(1)             <---------SPL7                                <------ZmHOX2a(2)      <---------AHL20(1)           --------------->AtSPL3                        --------->GLK1(1) --------LBD16               --------->YAB1                               <------ZmHOX2a(1) >>GATA-1    <-----------HVH21     <---------------AtSPL3         <---------At4g35610      <---------MYB52(1) --------At4g35610          <---------ATHB12                      --------->At4g35610     <---------MYB52(1) ------->At4g35610        --------->WOX13(1)               <---------YAB1 ================HOX2a_HOX2a   cagcggaatattttctgtcagacgtagtcaatcagaggctgtacgcataatcgaagacgtttttattcagcaccaaggaccagagatcgaccggtttgtt  22626900                                                 --------->O2                                                 <---------O2                                                 --------->ANAC55(2)                                                 <---------ANAC58                                                 <---------ANAC46                                                 <---------TGA1a                                                 <---------ANAC58                                                 <---------ANAC55(2)                                              --------->ARR14(2)                              <---------ARR11(3) <---------ANAC55(1)                        <------ZmHOX2a(1)   ----------->ARR10                   --------->ALFIN1     <---------MYB46(3)                   <------NtERF2     <---------ANAC58                          <-----------RAV1(1)                 <---------ANAC58    <---------ANAC46                      <---------ANAC58                 <---------ANAC46    <---------ANAC58                      <---------ANAC58                 <---------ANAC58 =========================bZIP_DOF      <---------ARR11(3)             --------->DEAR3(2)   <----------DOF2===============================bZIP_DOF     --------            --------->MYB52(1)--------->ARR11(3)<-------TEIL             --------->ARR11(3)  --------         --------->AtMYB61  ----------->ARR10 <---------ARR14(2)     ---------->DOF2  <---------GLK1(1)     <---------ETT(2) <---------ANAC46<---------LBD16             --------->TOE2(3)   --------->GLK1(1)   ttgtctctcgaccataccggcgtggaggataagatactttcgtgggtcgatacgtgtcttcgtaaaaacatcaaagagcttgtgttggatttctcaagct  22627000                     <---------ATHB12                    --------->ANAC58                    --------->ANAC58                    --------->ANAC46                                                              ---                ------>ZmHOX2a(2)                                                               -----               <------ZmHOX2a(2)                                                         --------->YAB1              <---------ARR11(3)                                         <---------ARR14(2)     <----              --------->ARR14(2)                                       ----------->ARR10--------->KAN4(1)              <---------ARR14(2)                                    <---------ANAC46    <---------KAN4(1)              --------->ARR11(3)                                    <---------REM1(1)  <---------KAN4(2) ->ANAC58    --------->GLK1(1)                            <---------At4g35610       <---------MYB59 ->ANAC58    <---------GLK1(1)                            --------->At4g35610     --------->MYB52(1)-   ccaagaaggttatggagatcccactcaatttctcatccagcgagacacttactgttttgaagctgcaatggtgtagatttgaaataccgaataatcttcc  22627100  Previous    Next  AGI:  At1g61330.1    Description:  F-box family protein. Identical to Putative FBD-associated F-box protein At1g61330 [Arabidopsis Thaliana] (GB:O64787); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78502.1); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 22626640    to: 22628192    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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