Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------WOX13(1)                                     --------->ATHB51      --------->At5g28300    <------ZmHOX2a(2)                                     <---------ICU4       ----------->GT1        --------->ARR14(2)                                     --------->ATHB12  --------->MYB52(1)        <---------ARR14(2)                                    --------->ICU4    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <-----------GT1           <---------YAB1--------->ANAC58 <---------ARR11(3)     <----------DOF2     ----------->GT1          --------->ANAC58 --------->ARR11(3)      --------->YAB1 ---->GLK1(1) <<<<<<<<<TBF1       --------->YAB1---------->DOF2   <---------CCA1(2)       --------->AHL20(2)   ttcaactctttttttcttcttctacagatgtaaatttcataattgacaaacaaagcaaaacggtatatatatcttgaaaaaccgatccacaaataataat  13153200                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                --------->ALFIN1                                              -------                      --------->ANAC58                                                     --------->YAB1                      --------->ANAC46      <---------ANAC58                          <----------DOF2                      --------->ANAC58      <---------ANAC46                    --------->MYB52(2)                    <---------ALFIN1        <---------ANAC58                  <--------P --------->AHL20(2)                   --------->MYB46(3)  --------->ICU4                      <---------TOE2(3)---------   ctactactaaatgagcgtccatccactccataatgtgtgtgataatgcgtttatcaactgtgtttgtggatgttatataggttagtagctttaaaataat  13153300       ------>MYB83       ------>MYB46(1)    ------------>CBF                                                         --------->DEAR3(1)  <-----------GT1                                                           --------->ANAC46 ----->AHL20(1)                                                             --------->ANAC58 ------ARR11(3)                     <---------CCA1(1)                       --------->ANAC58 ----->ARR11(3)                    <---------ARR11(3)                      ------->TEIL ------AHL20(2)                    --------->ARR11(3)                   --------->AtLEC2 ----->AHL20(2)           <---------------AGL15                <-----------GT1                      < ------AHL20(1)          <---------YAB1           --------->YAB1        --------->ANAC58         ---- -->AHL20(2)           <-----------GT1  <-----------GT1       --------->AHL20(2)                 ---- >AHL20(2)         <---------TOE2(3)<---------RVE1(1) --------->TOE2(3) --------->ANAC58        -----   atattcaccaatctcgtattttagattaccatacctagatattttctaactatcaaacttaaaattaactagacatgcacggccctaatattctctccca  13153400                                                                       <---------ANAC58                                                                   <---------ANAC58                                                                   <---------ANAC58                                                            <---------LBD16                                                           ------>ZmHOX2a(1)                                                      <---------At4g35610           <---------ATHB12                          ----------->ARR10 <---------ANAC58       ------------>CBF                              ------->TEIL --------->At4g35610     --------->GLK1(1)                            <---------TGA1a --------->HSFC1(2) --------->ANAC58                                 =======================MYC_MYB --------->ANAC55(1)                           ----------->HVH21  <---------HSFB2a(1) --------->ANAC55(2)           --------->CCA1(2)  <---------O2    <---------At4g35610 --------->ANAC58             --------->ARR14(2)  --------->O2  <--------P <---------ANAC55(2)          <---------ARR14(2)  --------->TGA1a <---------HSFC1(2)       --------->At4g35610 --------->ANAC46             --------->ARR11(1)------>NtERF2  <---------MYB52(1)       --------->At4g35610 ---------LBD16               --------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)     <---------ZAT2 ----->ANAC58                 <---------ARR11(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ZAT2 ----->ANAC58    --------->At4g35610           --------->DEAR3(1) --------->HSFB2a(1)   <---------At4g35610 ---->ANAC46     <---------ATERF1(1)         ------>ZmHOX2a(1)--------->LBD16       --------->ABI4(2)   ggcacggaattcaatgagccgcttcccttgaagatatgagcttcttcctccgacgtagctcctccggtagcttccttgtctatcggtgctagctgctaag  13153500                 ------>ZmHOX2a(2)                --------->GLK1(1)                <---------GLK1(1)                <------ZmHOX2a(2)               --------->ARR14(2)        --------->ZAT2               <---------ARR14(2)        <---------ZAT2               <-----------ARR10         <---------At4g35610               --------->ARR11(3)   <---------O2               <---------AGP1       --------->O2               <---------ARR11(3)   ======================bZIP_DOF              <---------CCA1(2)     --------->At4g35610              <---------ARR14(1)    ----------->RAV1(2)              <------NtERF2         <---------At4g35610                                             <           <---------LBD16          <---------TGA1a                                                 <        <-----------RAV1(2)         ======================bZIP_DOF       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ------>ZmHOX2a(2)             <---------ALFIN1       <---------TOE1(2)                       <---   <---------GLK1(1)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <------ZmHOX2a(2)        <-----------HVH21            <---------TOE2(2)   ---------->ID1      <---   --------->GLK1(1)       --------->LBD16     <----------DOF2    --------->ANAC58              <----  --------->ARR11(3)     <---------LBD16 --------->At4g35610      --------->ANAC46             xxxxxx  <---------ARR14(3)==========================bZIP_DOF--------->YAB1   <---------ALFIN1        <-----  <---------ARR11(3)<----------DOF2 --------->TGA1a<----------DOF2--------->ANAC58      xxxxxxxxxxxxx   gcgagatctctcaggcggatctctttttccggtgagacacctgagctgactttctttcatatgttttcaagccactctcgtcgttttccgatgtcttcgg  13153600                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             ======================RAV        ------>ZmHOX2a(2)           ------>ZmHOX2a(2)                                 ===============================RAV           ==================HOX2a_HOX2a                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           =====================HOX2a_HOX2a                  ----------->RAV1(1)             --------          --------->At4g35610                          <---------ATERF1(1)        --------->WRKY12          <---------At4g35610      <---------LBD16     ------>NtERF2  --------->MYB52(1)     <------ZmHOX2a(2)         <---------AGP1           --------->MYB52(1)  --------->RAP2.3(3)         ----------->HVH21     <---------ANAC58            <---------ALFIN1     --------->DEAR3(1)        ----------->RAV1(2)     --------->TOE2(3)           --------->DEAR3(1)   --------->DREB2C(2)----------->HVH21  <--------     <---------ANAC58            --------->AtMYB61   --------->ORA47(2)--------->ZAT2       --------- <----------DOF2                <---------MYB55(2)   --------->RAP2.3(1)<---------MYB111(1) --------- ---------ANAC58         ------>ZmHOX2a(1)          <---------ATERF1(1)--------->At4g35610  <-------- ---------ANAC58      ------>ZmHOX2a(1)             --------->LBD16 --------->MYB46(3)      --------- ------MYB52(1)      <---------ALFIN1--------->LBD16------>NtERF2 <---------ARR14(2)        <-------- -----P<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         --------->At4g35610--------->O2<xxxxxxxxxxxxxxxxx ---GAMYB<---------ARR11(3)     --------->MYB46(3)  <---------At4g35610----------->RAV1(2)  <-------- xxxxxxxxxx>smallRNA(i)----------->RAV1(2)         --------->DEAR3(1)<---------ALFIN1      <---------CCA1(2) ----MYB46(3)      <---------ATERF1(1)             --------->ANAC46<xxxxxxxxxxxxxxxxsmallRNA(i) xxx>smallRNA(i)------>NtERF2 <---------ALFIN1    <---------LBD16 --------->ARR14(2)      -----------   ttgctttccttgatctgaggcctcctcctgctccaccaccggagtcttcttctccgccgactccaccagaaccacctgacccccctgaccctcagatctg  13153700    <----------DOF2 ->CCA1(2) ---ARR10 >AGP1                                                                                      <-------- >ARR14(2)                                                                       <---------ANAC58 -AGP1                                                             --------->ANAC58    <---------At4g35610 >ARR11(3)                                                         --------->ANAC58--------->ALFIN1 -ARR14(2)  ------->TEIL                                          --------->WOX13(1)<---------At4g35610 xxxxxxsmallRNA(fl3)            ----------->HVH21           ---------->DOF2      <---------ANAC58 -ARR11(3) <---------CCA1(2)<------NtERF2                --------->AtLEC2   <----------DOF2 --------- >ARR10 <---------TOE2(3) --------->RAP2.6(2)        ------>ZmHOX2a(1)  xxxxxxxxxxxxxxxx>smallRNA(i)   cctctcctttaatgtatctcttgctcagtcgcccttgacgacgagtgtccctctccttcttgcaaagtcactcaatagctttggagtgctgcttctcgac  13153800                                                       --------->TOE2(1)                                                       --------->TOE1(1)                                                      ------>ZmHOX2a(1)                                            --------------------->WRI1                          <----                                            <---------AtLEC2                                   <-----                                            <---------ANAC58                            <---------AHL20(2)                                            <---------ANAC46                           --------->AHL20(2)                                            <---------ANAC58------>ZmHOX2a(1)    --------->ANAC58      <----------DOF2      --------->ARR11(3)      ------>ZmHOX2a(1)             --------->ANAC58 -HSFB2a(2)                <---------ARR11(3)   ---------->ID1             --------->TOE2(2)   ------ >HSFB2a(2)       <---------ANAC46  <---------ALFIN1 <---------ALFIN1      --------->TOE1(2)  <------   gagtccctctttacaaactggtttggagagatgttcccccatgtttgcttgtcctcctcgtcctctacttcttgtaacatgggaaggaattttatgttcg  13153900                                                                        --------->ETT(2)                                                                     <---------ANAC46           <---------ANAC58                                    <---------YAB1           <---------ANAC58                                    --------->GLK1(2)    --------->ALFIN1<---------HSFB2a(2)                     --------->ARR11(3)                     -- ---GAMYB<---------ARR14(2)    <-------GAMYB                <---------ARR11(3)                     == ----MYB46(3)       --------->HSFB2a(2)                    <<<<<<<<<RAP2.2                         == --->MYB52(2)     <---------ANAC46       <---------ATHB12 ----------->ARR10                --------->HSFB2a(2) -TEIL <---------MYB46(3)  <---------LBD16       <xxxxxxxxxxxxxxxxsmallRNA(i)    <-----------GT1  ---   ttgaatgtgtggttcttgttttgtagaactcggggttaactcaatcgatttcgatgggtttagatattcttgtgtctacatttttgctctcttctagcat  13154000                                                                                                    <                                                                                                   <x                                                                                                   xx                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                ------                         ---------->DOF2                                                       <-----             <---------ANAC58                                                                 <------             <---------ANAC58                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->AHL20(2) ---->ZmHOX2a(1) ------>ZmHOX2a(2)   --------->GLK1(2)                                     <---------AHL20(2) =======================HOX2a_HOX2a --------->ARR14(2)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ======================HOX2a_HOX2a  <---------GLK1(2)       --------->AHL20(2)            xxxxxxxxxxx ------>TOE2(3) <------ZmHOX2a(2)   <---------ARR14(2)  ----------->GT1         --------->ZAT14<xxxxx   ccttatcgccttgttgcgatcgcttactaaagtatgcagattctgtctcgatttagctcggtttaaatttgtctcatggcagtttagacatatttattta  13154100  Previous    Next  AGI:  At1g35617.1    Description:  unknown protein Range:  from: 13153561    to: 13153926    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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