Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------AHL20(1)                             --------->AHL20(2)                             <---------AHL20(2)                             --------->AHL20(1)                            --------->AHL20(2)                            <---------AHL20(2)                        --------->AHL20(2)                        <---------AHL20(2)                        <---------YAB1                       --------->AHL20(2)             --------->AHL20(1)             <---------AHL20(2)             --------->AHL20(2)       <---------AHL20(2)             --------->ARR11(3)  --------->AHL20(1)             <---------ARR11(3)  <---------AHL20(1)                                                <x             <---------AHL20(1)  --------->AHL20(2)             <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->AHL20(2)   <---------AHL20(2)    ---------->DOF2                         ------     ----------->GT1   --------->AHL20(1)            <---------AHL20(2)         xxxxxxxxxxxxxxxxxxxxx -------------AGL15    <---------AHL20(1) --------->TOE2(3) <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------------>AGL15   --------->YAB1<---------YAB1  --------->AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   caaaatttagtaaaatatattcaaatataattaaatttattaaaacttaacaaatttaaaagcttttttgtttggagaccatctatctacaaacaaatac  12854700                                                                           ------->TEIL                                                                   <---------ETT(1)                                                                   ----------->HVH21                                                                  --------->DEAR3(2)                                                                  --------->MYB46(3)                                                                ------->TEIL       <xxxxxxxxxxxxxxxxx                                      <-----------GT1     <xxxxxxxxxxxxxxxxsmallRNA(s)          -----                                 <----------DOF2        xxxxxxxxxxxxxxxx>smallRNA(i)   --------->AHL20(2)        <---------AHL20(2)    ------->TEIL              <xxxxxxxxxxxxxxxxsmallRNA(i) ------>MYB46(1) xxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxsmallRNA(i)  xxxxxxxxxxxxxxxx>smallRNA(i)       xxxxx --->MYB52(1)              --------->ANAC58             <xxxxxxxxxxxxxxxxsmallRNA(s) ------>MYB83---- xx>smallRNA(le3)          --------->ANAC58           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     xxxxxx   ccgtttctattttttgggtattttagggcatgaaactttttatccaaacagacccaaacccaaatggacccgacccgaacccgaaccaaatatttagaat  12854800                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                 --------->AHL20(2)       <---------ANAC46                                                                            --      <---------MYB46(3)                                                                           <- xxxxxxsmallRNA(se3) <-----------GT1                   --------->ANAC46                           --- ---->ICU4----------->GT1                             --------->HSFB2a(2)                         <-- xxxxxxxxxxxxxxxxxx>smallRNA(le3)                     <---------HSFB2a(2)               --------->ARR14(2) ---->ATHB1     <---------AHL20(2)        --------->MYB52(1)                      ------>NtERF2   <-- xxxxxxxxxxxxxxxx>smallRNA(si3)     <---------ALFIN1-------->P               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   tattctattgggtagtaaataatatacccattaatcccaaacccgaacgggttctacccgaactcgaatgagttactcatatgccagccctattctctaa  12854900                                                                                                    <                                                                                                   <x                                                                                            <xxxxxxxx                                                                                            xxxxxxxxx                                                                        --------->At4g35610 <xxxxxxxx                                            <----------DOF2          ------>ZmHOX2a(1)     <xxxxxxxxx                                            <---------DAG2    <-----------GT1              xxxxxxxxxx                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                <xxxxxxxxxxx ------->AHL20(2)                  <---------At4g35610  <---------AHL20(1)              <xxxxxxxxxxxx --------AHL20(2)                  --------->At4g35610  --------->AHL20(2)             --------->YAB1 ------>AHL20(2)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)  <xxx -------AHL20(1)             <---------AHL20(2)         <---------AHL20(2)     --------->ICU4<xxxxxxx -------AHL20(2) --------->LBD16   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------At4g35610<xxxxxxxxx   tttaattatctaaaaactccccaaaaaacatatattttgctgactactttttattcaaaaaattttacatcctcttctgccaaaattattcataagacat  12855000                                                                                                    <                                                                                                    x                                                                                                    x                                                                                                    x                                                                                                    x                                                                                                  <xx                                                                                          <xxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       <---------ANAC46                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     <------MYB83xxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     <------MYB46(1)x                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                <---------YAB1 <xxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 <---------ICU4                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <--------ATHB1                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 --------->ATHB12                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 -------->HAHB4                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                --------->ICU4                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                <---------YAB1                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              --------->YAB1                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <---------ICU4                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)             --------->ICU4                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxsmallRNA(s)                                          xxxxxxxxxxxxxxxx>smallRNA(i)<xx xxxxxxxxxxxxxxxsmallRNA(s)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxsmallRNA(fl3)                                      ----------->GT1xxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxx>smallRNA(i2)                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxsmallRNA(le3)                                 <---------YAB1  xxxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxsmallRNA(se3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxx xxxxxxxxxxxxx>smallRNA(fl3)                               --------->GLK1(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxsmallRNA(le3)                       --------->KAN4(2) xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)< xxxxxxxxxxxsmallRNA(le3)           --------->TOE2(3)     <---------ARR11(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxsmallRNA(se3)       --------->YAB1        --------->ARR11(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxsmallRNA(se3)     --------->GLK1(2)       <---------GLK1(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxsmallRNA(si3)      <---------GLK1(2)       <---------RVE1(1)<---------TOE2(3) ------->TEIL   cccaaaacccttggaataatgattccatgaatgaagaatcttaatttgaatataccaagagattttgaaaggttttaagtttttgataggtgtgtatgtg  12855100                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)             <xxxxxxxxxxxxxxxxsmallRNA(i)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <xxxxxxxxxxxxxxxxsmallRNA(s)                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                <------MYB83            xxxxxxxxxxxxxxxx>smallRNA(i)                        <------MYB46(1)            <xxxxxxxxxxxxxxxxsmallRNA(s)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           *TSS                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <xxxxxxxxxxxxxxxxsmallRNA(i)        <-------TEIL                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <-------TEIL                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                        <---------MYB52(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----------->GT1                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------------AtSPL8                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxsmallRNA(se3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxx>smallRNA(se3)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxx>smallRNA(se3)                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxx>smallRNA(fl3)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxx>smallRNA(si3)                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxsmallRNA(se3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxx>smallRNA(si3)                                    --------->LBD16 xxxxxxxxxx>smallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxx>smallRNA(le3)                               xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxx>smallRNA(le3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxsmallRNA(si3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxx>smallRNA(fl3)                                 xxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxx>smallRNA(le3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxx>smallRNA(si3)                                 <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxx>smallRNA(se3)                               xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxx>smallRNA(si3)                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxx>smallRNA(le3)                               <xxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxx>smallRNA(l2)                               xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxx>smallRNA(i2)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) xxxxxxx>smallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxx>smallRNA(le3)                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxx>smallRNA(le3)                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxx>smallRNA(i2)                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxx>smallRNA(l2)                               --------->ZAT14 xxxx>smallRNA(le3)                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               <---------ZAT14 xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxx>smallRNA(si3)                              <---------ARR14(2) xxxxxxxxx>smallRNA(si3)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxx>smallRNA(le3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxx>smallRNA(se3)                               --------->ARR14(2) xxxxxxx>smallRNA(si3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxx>smallRNA(le3)                               xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxx>smallRNA(si3)                              xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxx>smallRNA(le3)                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxx>smallRNA(i2)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xx>smallRNA(i2)                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxx>smallRNA(fl3)                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxx>smallRNA(si3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxx>smallRNA(le3)                               xxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxsmallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxx>smallRNA(si3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xx>smallRNA(si3)                                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxx>smallRNA(le3)                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxx>smallRNA(si3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xx>smallRNA(le3)                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xx>smallRNA(s2)                                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) x>smallRNA(le3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xx>smallRNA(si3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxsmallRNA(se3)        --------->AHL20(2)<-----------RAV1(2) x>smallRNA(le3)                 --------->YAB1--------->At4g35610<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) x>smallRNA(i2)                <-----------TBP <---------ZAT14<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) x>smallRNA(l2)           ------->TEIL  <---------AHL20(2)<xxxxxxxxxxxxxxxxsmallRNA(s) >smallRNA(si3)           -------->P   --------->YAB1xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->ANAC46                        <----- >smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s)    --------->ZAT14<--------P                     <------- xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------YAB1 xxxxxxxxxxxxxxxx>smallRNA(s)             <--------- ---------------AtSPL3  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   -   agaaggtacatacatcgtgatggtaatctacctatttataattttaatctgcagtataccgcaggtaggcttatattttagttaaactaaaaacttttat  12855200                             <---------AHL20(2)                             <---------AHL20(1)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <---------YAB1          --------->AHL20(2)         xxxxxxxxxxxxxxxx>smallRNA(i)    <---------ARR11(3)    <---------AHL20(2)           --------->TOE1(2)                 <<<<<<<<<RAP2.2    --------->ARR11(3)  <---------AHL20(2)          <---------ZAT14                     <---------YAB1   --------->YAB1       <---------YAB1           ----------->GT1                        <---------TOE2(3)  ----------->GT1    --------->ARR11(3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --------->AHL20(2) -------CBF          <---------ARR11(3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <---------YAB1 --YAB1         --------->AHL20(1)      --------->AHL20(2)                        <---------AHL20(2) -DOF2<---------ICU4--------->YAB1      <---------AHL20(2)                   --------->ETT(2)      <- --------->DOF2--------->AHL20(2) <---------AHL20(2)--------->ZAT14         ---------->ID1       <---   tgtaaagataattacaaatatatgatattattttatttgattttaaatgtatagtaaactgcgagttgtatatgttttgtcgatattatttagattgttt  12855300                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                             xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <xxxxxxxxxxxxxxxxxxsmallRNA(si3)          x                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     --                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <-                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <--                                                        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    xxx                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     xxxxxx                                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             ------                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           xxxxxxx                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxx                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           xxxxxxx                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <xxxxxxx                            ----------->GT1            <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxx                          >>>>>>>>>ARR2              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxx         --------->AHL20(2)<---------WOX13(1)    <----------DOF2       <---------YAB1  <-----------HVH21 --------ZAT6            --------->ATHB12       <---------DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<- ------ANAC46           <---------YAB1       <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)<-----   agtgtttaaaattatacacttgtattttgattgttaattttagagtttcacctttagtataccatcttgtattaatatcgatctaaacctgtcaattcta  12855400                                                                  <---------YAB1       --------->ZAT2                                           <---------AHL20(2)       <---------ZAT2                                           --------->ATHB51  <-----------GT1                                               --------->ATHB12 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                           -------->ATHB1 ------->ARR11(3)                                              --------->ICU4 ------->ARR14(2)                                            <---------ICU4 --------GLK1(2)                                             --------->YAB1 ----ZmHOX2a(1)                                             <---------AHL20(2) xxxxxxxxxxxxx>smallRNA(i)                                  --------->AHL20(2) xxxxxxxxxx>smallRNA(s)                                    <---------YAB1 --->HSFB2a(2)                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxx>smallRNA(i)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxsmallRNA(i)                                ----------->GT1 xxxxxxxxx>smallRNA(s)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxsmallRNA(si3)                --------->ARR11(3)-------->HAHB4         ------->TEIL xxxxxxxxxxxxxxxxsmallRNA(le3)                <---------ARR11(3)<---------ICU4      <---------YAB1--- xxxxxxxxxxxxxxsmallRNA(i2)<-----------GT1    --------->GLK1(2)<---------YAB1 <---------TOE2(3)   --- --------ARR14(2)     --------->AHL20(2)     --------->RVE1(1) <---------ATHB51 --------->ARR11(3)<-- ----HSFB2a(2)  <---------AHL20(2)    --------->ANAC46xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       ------   ggattttccagcttgtattaaaaattgaataacatcatacacataaaaaatctaatatgttattaattattgtagtatataagattatgaatttcaaaaa  12855500                                                                                     --------->AHL20(1)                                                                                     <---------AHL20(1)                                                                                   <---------AHL20(2)                                                                                 <---------YAB1                                        --------->ZAT14                         --------->AHL20(2)                               <---------YAB1                                 <---------MYB52(1)                             <---------ICU4        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <---------AHL20(2)     --------->YAB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------AHL20(1) ------>AHL20(1)            <---------ATHB51  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->YAB1 ------>AHL20(2)--------->AHL20(2)      <---------ZAT14                 <-----------GT1 <---------AHL20(2) -------AHL20(2)<---------AHL20(2) ------>ZmHOX2a(2)     --------->TOE2(3)  ----------->GT1   ------- --->YAB1 --------->AHL20(2)--------->ICU4 <xxxxxxxxxxxxxxxxsmallRNA(i)----------->HVH21--------->AHL20(2)   taaaatatgaaattgaatataaatattcaaattatgatccagtactcagtagaaagttttcttaaatctatttttgacccgttataatatttttttatgt  12855600  Previous    Next  AGI:  At1g35143.1    Description:  transposable element gene. similar to replication protein-related [Arabidopsis thaliana] (TAIR:AT1G52950.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64410.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340) Range:  from: 12854986    to: 12855111    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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