Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ------>NtERF2                                                                                        <---------ATERF1(1)                                                                               --------->ATHB12                                                                               --------->YAB1                                                                               <---------ICU4                                                                               <--------HAHB4                                                                              <---------YAB1                                                                              <---------ATHB12                                                                            <xxxxxxxxxxxxxxxxsmallRNA(se3)                                 <-----------GT1                            --------->WOX13(1)                         --------->AHL20(2)                                 <xxxxxxxxxxxxxxxxxsmallRNA(si3)                         <---------AHL20(2)                         --------->ARR11(3) <---------ETT(1)                        --------->AHL20(2) <----------DOF2  --------->TOE2(3) --------->ICU4 ----->DOF2 --------->HSFB2a(2)<-----------GT1        <-----------GT1   ----------->GT1--------->DEAR3(1)   aagttaatcgtcttctataatccaaattaaaattttcacttctcactttgaaatataaacattcttaaatggtcttgttaatcattactccgaccccaaa  12046200                    --------->TOE1(3)             --------------->AtSPL8           <----------ID1                         <---------------AtSPL8           ----------->GT1      --------->At4g35610   --------->ZAT18                        <-------          <---------TOE2(3)     <---------At4g35610   <---------ZAT18                  <----------DOF2          --------->MYB59   <-----------HVH21 ------->TEIL                     <---------ATHB12   <--     <---------YAB1 --------->TOE2(3)     <---------TOE2(3)  --------->HSFB2a(1)  ------->TEIL ------   aaccattacaataaggtcaaaaccttataatgtcatctcatgctaatgtatatttgtacacaaatgttccttctcaatccaatgaatctctttttttact  12046300                                                                          <---------ICU4        --------->ANAC58                                                 --------->ICU4   <----------       --------->WOX13(1)                                       <-------TEIL         ------->MYC3 ----GT1--------->ANAC58                 <---------ARR11(3)    --------->AtLEC2      <-------MYC3 -------ALFIN1                    ---------->DOF2              --------->ANAC58   <---------ALFIN1 --->ANAC46                  ----------->GT1                   --------->ANAC58--------->REM1(1)   ccacattggcaatccacaatagtagattaagagtttaaaagaagacattacatagacaactagacatgcattgccattactacaacacgttttcacatac  12046400                                <---------YAB1                               <---------At5g28300                   --------->ANAC58   <---------ANAC58  <---------ANAC58                   --------->ANAC58   <---------ANAC58  <---------ANAC58                        ----- -GT1          -------->P     <-----------GT1  <-----------GT1     ------>ZmHOX2a(1)        ------>ZmHOX2a(1)   taacttcgattccaaactaccacgaatgcaatttaccattgcttcttatttacaattttcttgagactccttcattttgaatccatgtcttctccttcct  12046500                                                                        --------->RAP2.6(2)                                             ----------->GT1            ----------->RAV1(1)                                            --------->ANAC58         --------->ANAC46                                            --------->ANAC58         --------->ANAC58                                        ------>NtERF2                --------->ANAC58                                        <---------RAP2.6(3)     --------->ZAT6      --------->YAB1                   <---------ETT(1)        <---------ZAT14 ->ZmHOX2a(1)     ---------->DOF2 <------------CBF             --------->ZAT14--------->YAB1    -----   cgcatttatcaaaacacattaaaagcctgtttttagaattgccgacaaggaaaaaaaaactattctacactaagccacaaaaataacttaaaaccaaaat  12046600                                                                                       --------->ARR11(3)                                                                              --------->LBD16                                                                             <---------ANAC58                                                                             --------->ANAC55(2)                                                                             <---------ANAC58                                                                             <---------ANAC55(2)                                                                            <-------TEIL ------>ZmHOX2a(2)                                                                            ------>ZmHOX2a(2)                                                                           --------->CCA1(2)                                                                           <------ZmHOX2a(2)                                              --------->ALFIN1            <---------ARR14(2)                                     <------MYB46(1)                      <---------ARR11(3)        -                --------->ICU4       <------MYB83                        --------->RVE1(1)          -         ---------->DOF2           <--------P<-----------HVH21        ---------->DOF2  <---------ARR11(3)    ---------->DOF2  *TSS         <---------SPL7       <---------HSFB2a(2)--------->ARR11(3)        - ---->AHL20(2)  <---------YAB1  --------->ALFIN1       --------->HSFB2a(2)--------->ARR14(2)    <----   aaaaacaaaaggaaagtgatgcttagattgcgatgtggtagggactcggtgagggttttggaagagcatgacaaaagatccgtgccattgatctctatta  12046700                                                                            <---------At4g35610                                                                            <---------CCA1(2)                                                                       --------->YAB1                                                                     <-----------ARR10                                                                     ------->TEIL                                        --------->ARR11(3)           <---------ARR14(2)     ---------->DOF2         ==============================bZIP_DOF  <---------ARR11(1)     ==================================bZIP_DOF                      --------->ARR14(2)   --------->AtMYB61         --------->O2                           <---------CCA1(2) -------->ANAC58          ------>ZmHOX2a(1)         <----------DOF2 <---------ARR14(1) -------->ANAC58    <<<<<<<<<TBF1       <---------ARR11(3)       --------->HSFB2a(2) -------->ANAC46 <<<<<<<<<TBF1 <---------CCA1(2)<----------DOF2  --------->HSFC1(1) -------GT1   <<<<<<<<<TBF1  --------->TGA1a------>ZmHOX2a(1)    <---------HSFB2a(2)       --------->ANAC46   acacaccaaaagcttcttcttcttcttcctctcgtctctaaaaatccttcctttctttctgggttttctcgaatcttcatctctcattcaaacccacaag  12046800               --------->MYB46(3)          <------ZmHOX2a(2)   ------>ZmHOX2a(2)                                                     <-------TEIL  <------ZmHOX2a(2)                               ------->TEIL   ---------->DOF2     <---------ALFIN1 --------->ARR14(2)                               <---------ARR14(2) --------->ARR11(3)         <---- <---------ARR14(2)                 >>>>>>>>>TBF1 --------->ARR14(2) <---------ARR11(3)     ------>ZmHOX2a(1)   tccgatctcgcgatccaaacaccatggaagaggttgaagaagaagtgagacgaatcgtcgaacaagttaaagagcttcatgactcttccacatccttcgt  12046900                                                                 ------>NtERF2                                                                --------->RAP2.3(3)                                                               --------->RAP2.3(1)                                                --------->WRKY45--------->DEAR3(1)                                                --------->WRKY12--------->RAP2.3(2)                               --------->MYB52(1)             --------->LBD16                              ----------->HVH21 --------->WRKY38(1)                             --------->LBD16  <-------GAMYB   ------>NtERF2                            --------->ANAC55(2)--------->DOF5.7(2)                            --------->ANAC46 <---------MYB46(3)--------->ORA47(2)              ------                    <----------DOF2        --------->LBD16--------->ARR14(2)           ----------->HVH21    <<<<<<<<<TBF1<---------ARR11(3)        <-----------HVH21 --------->ANAC46        --------->At4g35610 -----CCA1(2)    --------->ARR11(3)    --------->DEAR3(1)--------->WOX13(1)          <---------At4g35610   ctcttcttcttctcaagaagagctttctctccgtaacagagcctccgtcgttgactcatcaatccgccgtcttcattctactcttgcctctgacaaacat  12047000                    ----------->GT1          <---------DAG2                <---------CCA1(2)          <----------DOF2              ------>MYB83       --------->ANAC58        --------->YAB1                          --------->GLK1(2)       --------->ANAC58     <----------DOF2                           <---------GLK1(2)  <------ZmHOX2a(2)--------->DAG2      ------>MYB46(1)        <---------GLK1(1)    ---------->ID1 --->ARR11(3)    ---------->DOF2  <-----------GT1        <-----------GT1 --------->TOE2(3)   <-------   ctcgatcccaagcttttcgaaaaggttaatcttttataacctatctctctgtctctgtttttcgatttctccgattcttaattttgttctcttgttacag  12047100  Previous    Next  AGI:  At1g33230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10430.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10430.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO62852.1); contains InterPro domain TMPIT-like; (InterPro:IPR012926) Range:  from: 12046621    to: 12050046    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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