AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
---------->DOF2 <----------ID1 ----------->GT1
ttcaaatgtccagttactgtgtgtttggacattgtttagctaaaaaaaacaaaagagagcttccattgttaaatgtgtgcattgtaggcttgtaatcatg	10762300
<-----------GT1 <----------DOF2 <-----------GT1 <----------DOF2 ------->TEIL ---------->ID1 <-----------GT1 <-------TEIL
tttctttttttcaattgtttatgtaactttgactaccaactattttgtcatttttatatttttattttaaacctctaagaatattggaaagattcaaaaa	10762400
<-----------GT1 <-----------GT1 <----------DOF2
ttactgataacgaatatattaattaactatgtaataatcaatcttcatgaccacaaggattattaagataaggtttactttttttatactatacttattg	10762500
---------->DOF2 <----------DOF2 ----------->GT1 ----------->HVH21
gggagtttcagatttgataagtttatgtctagcctttaattaatgatttagagttaatcaaaaataaaatctggaagactttgaactgaccaaaaagact	10762600
------>NtERF2 <------NtERF2 ------>NtERF2 ------->GAMYB ---------->DOF2 <----------DOF2 <------ZmHOX2a(1) ------------>CBF <-----------GT1 <----
ctcatgctaagtaattgaaggacatttcagccgccagcttgacccaattaaaaagcccattttagtttttcttccctttgttttctcttattttaatttt	10762700
-------GT1 *TSS <-------GAMYB ------>ZmHOX2a(2)
acctcagtttataatattttattctctgaaatctgaaaaatcatctcttctgaaaattttgttttccgttaattcgtcgagtctctcgatctccgttctc	10762800
<---- ------>ZmHOX2a(2) ------ <------ZmHOX2a(2) ------ ------>ZmHOX2a(2) --------->AGP1 ------- <------ZmHOX2a(2) ---------->DOF2 <------NtERF2
atcagatttcaaactctccgatctcggattccgacgagatattagtctcattgtcgaaagagatctgttccgatacggcgtgagaaatggatagcggcga	10762900
<------NtERF2 <-------GAMYB <-----------HVH21 <---------O2 --------->TGA1a --------->O2 <---------TGA1a ---------->DOF2 --NtERF2 ------>NtERF2 <---------ALFIN1 <------NtERF2 ----->RAV1(1)<------NtERF2 <------ZmHOX2a(1) --------->ALFIN1 <--- >NtERF2 ------>NtERF2 <-----------HVH21 <------NtERF2 --------->ABI4(2) <----- ---->HVH21 <------NtERF2 <------ZmHOX2a(1) ==================MYC_MYB --------->ALFIN1 <------
cattgaagaagccggcgggaatggcgaagaggaattccggtcaggaccacgtctcggcggtagcaaatacagaccggtggtggcgcacgatagagcggtt	10763000
------>ZmHOX2a(2) <-----------ARR10 <---------AGP1 ------>ZmHOX2a(1) ====================HOX2a_HOX2a ===============HOX2a_HOX2a ----GAMYB <------ZmHOX2a(2) <---------ALFIN1 ---P ------>ZmHOX2a(1) ------>ZmHOX2a(1) <-------TEIL -GAMYB =======================HOX2a_HOX2a <----------DOF2
gttgagatgtcctccatcgatcctggatcttcctcttccaccctcaagtaatttcttcttcttttataaaaattcattgggaacttcaatttcgcgagat	10763100
---------->ID1 ---------->ID1 ----------->TGA1 <-------GAMYB <-----------GT1
gttgatgacgattctgtgtactgatcagtagaaatgggatgctcgttgatatgatattaggctgctaggttgtttagatttttcgtttcgtcgttccctt	10763200

AGI:	At1g30440.1
Description:	phototropic-responsive NPH3 family protein. Identical to BTB/POZ domain-containing protein At1g30440 [Arabidopsis Thaliana] (GB:Q9S9Q9); similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT5G03250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72130.1); similar to BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] (GB:ABN08065.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40402.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210);
Range:	from: 10759457	to: 10762376	Orientation: Forward
Links:	TAIR MIPS

AGI:	At1g30450.1
Description:	CCC1; cation:chloride symporter/ sodium:potassium:chloride symporter. similar to TPA: cation chloride cotransporter [Medicago truncatula f. tricycla] (GB:CAJ38499.1); similar to putative Na+/K+/Cl-cotransport protein [Oryza sativa (japonica cultivar-group)] (GB:BAD03666.1); similar to cation-chloride co-transporter [Nicotiana tabacum] (GB:AAC49874.1); contains InterPro domain Na-K-Cl cotransporter superfamily; (InterPro:IPR004842); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841)
Range:	from: 10762721	to: 10769487	Orientation: Forward
Links:	TAIR MIPS

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