AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------>ZmHOX2a(2) <------ZmHOX2a(2) <---------AGP1 ------->TEIL ------>ZmHOX2a(2) ================HOX2a_HOX2a <-----------HVH21 <------ZmHOX2a(2) <------ZmHOX2a(1) ----------->HVH21 --------->AGP1 ---------->DOF2 =================HOX2a_HOX2a ------->TEIL
gccataaaagaaggcttctcaacatcaggaacacggatctggagatactgaccgggtctcgtgtacgaagctacgagatccggagcgtttgaaatgtcga	5211900
<------NtERF2 ------>NtERF2 <---------ABI4(1) <------NtERF2 ------>NtERF2 <---------ABI4(1) <------------------SPL14 ---- ------>ZmHOX2a(1) <------NtERF2 ---------->DOF2 <------ZmHOX2a(1) <-----------HVH21 --------->ALFIN1
ttgagatgtggaaaagcgattctgcagctgattcgattagagagagaggagctggagtccagagggaagcgtcctggcgaacggcggcggcggatacaac	5212000
<-------GAMYB ----------->GT1 <------ZmHOX2a(1) ------>NtERF2 <------NtERF2 <---------O2 --------->ALFIN1 --------->ALFIN1 ---------->DOF2 ----------->HVH21 --------->ALFIN1 <-----------RAV1(2) --------->ALFIN1 --->GAMYB <-----------------------TaNAC69(2) --------->ALFIN1 ---
ggaagcgacgcggttatttcgggataaacggagatggcgtgtaagagggagatggcgcaggataaacatgggggagagggagtggctaaagtgcgcatgg	5212100
---------->DOF2 ---------->DOF2 <------NtERF2 <-------GAMYB ------>NtERF2 <------NtERF2 <------NtERF2 ---------->DOF2 ----------->HVH21 ------>NtERF2 ------>NtERF2 -------->HVH21 <-----------RAV1(1)<-----------HVH21 <------NtERF2 ------>NtERF2
gtgacagaaggcgcgaaaggaagagtggacatggtggagagtttttggggctctatatgtgaccgtcaaatttagccggcggtagaaaagggcggcccga	5212200
--------->ALFIN1 <---------TGA1a =============================== --------->O2 <---------O2 ===========================MYC_MYB <------NtERF2 <-----------GT1 <<<<<<<<<<HY5 < ------>NtERF2 ------->TEIL <-------GAMYB --------->TGA1a <---
ttggttcggtggcacgattgtgttatttttttttgctatgcacctaatttccttccgttacaatgttttgccacgtggatgatcaaaatatcattctatc	5212300
<---------ALFIN1 ==========bZIP_DOF <----------ID1 ----------DOF2 ---------->DOF2 -- --------GT1 *TSS <----------DOF2 ----------
tactttccgaccacttgttgtgatacttcgaaaattgcattccctcttcatttaattttgctagctcgtctttcaaagaaaaaacaccaaatcatgtaat	5212400
<----------ID1 ----------->GT1 <-------TEIL -------->DOF2 ---------->DOF2 --------------->AtSPL8 <-------GAMYB ->GT1 <------------CBF ------------>CBF <---------------AtSPL8 -------->P <----
taaaagacagaattgtggaagaaaagtgacaagcaatatgcatattaaaaaacgtaagagtacattatcaatgaacactccctaccgttgagccaaattt	5212500
--------->ALFIN1 <---------TGA1a --------->TGA1a ------->TEIL <---------O2 ---------- -------GT1 --------->O2 <------ZmHOX2a(1) ----------->RAV1(1)
aacgtatatatttcattcatggttttggaattttgccaagtggcactacactatagattcccttggtaaggaattacacataaccaagcaccaaaaagca	5212600
<----------DOF2 <------NtERF2 <- >DOF2 *TSS <---------ALFIN1 <----------DOF2 --------->AtLEC2 ------
gacagtagtacttcacgattatcactcaccactttccgtttcaactttcaaactctctctcacaagccatgcaagacgcggagagaaccaccaatgatcc	5212700
<-----------HVH21 <----------DOF2 ------->TEIL ------>ZmHOX2a(2) ----------->ARR10 ------>ZmHOX2a(2) ----------->HVH21 <---------AtLEC2 ------>ZmHOX2a(1) -------P ----------->GT1 <------ZmHOX2a(2) ------>NtERF2 >ZmHOX2a(2) ---------->DOF2 --------->AGP1 <------ZmHOX2a(2) <----------DOF2 ------>NtERF2
ggtagacagaattgagaaagtgacatggagagatctgcaagacggatctttcaccgcagaactcaagaggcttatctgctttgcggctcctatggctgcc	5212800

AGI:	At1g15140.1
Description:	oxidoreductase NAD-binding domain-containing protein. similar to ATLFNR2 (LEAF FNR 2), poly(U) binding [Arabidopsis thaliana] (TAIR:AT1G20020.3); similar to ATLFNR2 (LEAF FNR 2), NADPH dehydrogenase/ oxidoreductase/ poly(U) binding [Arabidopsis thaliana] (TAIR:AT1G20020.1); similar to ATLFNR2 (LEAF FNR 2), poly(U) binding [Arabidopsis thaliana] (TAIR:AT1G20020.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42229.1); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain Pheno
Range:	from: 5210201	to: 5212344	Orientation: Reverse
Links:	TAIR MIPS

AGI:	At1g15150.1
Description:	MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G15180.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G15160.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G15170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42224.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528); contains InterPro domain MATE family transporter related protein (InterPro:IPR015521)
Range:	from: 5212610	to: 5214853	Orientation: Forward
Links:	TAIR MIPS

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