AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<----------DOF2 <----------DOF2 <-----------HVH21 ---------->DOF2 <- ------RAV1(1) <----------ID1 <---------------AGL15 <----------DOF2
ttgtgcctttctttggtccaattgtcgtagacaatgcgtcaaacaaatcattaggcttgaagtttcaataaagagagattttcaagcctctgctattagg	5204200
=====================================HOX2a_HOX2a -----NtERF2 <------ZmHOX2a(1) ------>ZmHOX2a(2) ---------->DOF2
tggcctggtactatggccattgattaggatttcttagagcttgccaaagtttatgatcggactaactctgaagcttattggtcttaaaaagataactatc	5204300
<------NtERF2 <<<<<<<<<AtERF-3 ----------->HVH21 <<<<<<<<<AtERF-2 --------->O2 <<<<<<<<<AtERF-4 --------->TGA1a <<<<<<<<<AtERF-1 <---------TGA1a <<<<<<<<<AtERF-5 ----------->GT1 <---------O2 ------>NtERF2 ---------->DOF2 ----------->GT1 -------->HAHB4 <----------DOF2 ============================================bZIP_DOF
taatgatggcggctacaagaagatattttcttttaaaaaattttgaaggtgaaagaaggttgaatagtcttatggtgaaatcacatgtgactggaatgaa	5204400
<-- <----- <----- ------>NtERF2 ------>NtERF2 <------NtERF2 <----------DOF2 ------>NtERF2 --------->AtLEC2 <------ZmHOX2a(1) <------NtERF2 --------->ALFIN1 <---------ALFIN1 <----------DOF2 --------->PCF2
gtgaagaactgtttagtggagtgtgtgatgcatgcagcagccacttttgaaggacagcttggactttagagtgagagtgagatgtatggcccgcggcggc	5204500
----NtERF2 <-----------GT1 -NtERF2 ----------->HVH21 ----------->ARR10 ----------->GT1 ---- --GAMYB ------->TEIL ------------>CBF ----------->HVH21 <--------P <-----------GT1
tgcattagactgaatcttatccttgacactctacagcaattatgtagattctcccatttgaccctctatttaagggttagcaagtgtaataccagtccat	5204600
--------->ALFIN1 ------->TEIL <-------TEIL <- -------->CBF ----------->HVH21 --------->ABI4(2) ------>ZmHOX2a(1) <-----------GT1 <-----
acaataccattacatagccatgaacggtggagacggtgcttctagctatgctcgcaactcttcctatcaggttttaataatatacatcactcttccacta	5204700
------>ZmHOX2a(1) <------ZmHOX2a(2) ----------->RAV1(2) ===============HOX2a_HOX2a <-----------GT1 <------ZmHOX2a(1) ---------DOF2 <---------------AtSPL3 ===================HOX2a_HOX2a ----ALFIN1 <<<<<<<<<MYB98 <------NtERF2 ------>ZmHOX2a(1)----
ccttttttcctgagctagcttactaatatgttacttgggtgtacgcctgtagaggggagccattgaggctgcggaagcactcctcaggaacgagatcaac	5204800
<---------ALFIN1 <---------ALFIN1 ----------->RAV1(1) <------NtERF2 ------>NtERF2 ------>ZmHOX2a(1) <--------P ------>NtERF2 <----------DOF2 <-------GAMYB --------->PCF2 --->GAMYB -------->P <----------DOF2 <----------DOF2 ------>NtERF2
gcacggctcgacatcactaaccattccttttcatcttttacaatcgcagactttggttgctcctccggccccaacaccgtaattgctgtcgacatcatca	5204900
<---------ALFIN1 <---------ALFIN1 ----------->RAV1(1) <---------O2 --------->O2 ============================ --------->TGA1a <---------TGA1a ============================ ------>NtERF2 ------>ZmHOX2a(1) ------->GAMYB
tccaagccctctaccacaagttcacctcttctctgcctaatactacaactcctcagtttcaagtcttcttcaacgacgtctcccacactgatttcaatgc	5205000
<---------ALFIN1 <----------DOF2 ------->GAMYB ------->TEIL <----------DOF2 <---------ALFIN1 <----------DOF2 ===========bZIP_DOF <---------ALFIN1 ------>ZmHOX2a(1) ------>ZmHOX2a(1) ===========bZIP_DOF ---------->DOF2 <-----------RAV1(2) <---------AtLEC2 ------>ZmHOX2a(1)
actctttgctttgctccctccacaacgcccctacttcgttgcaggttcctatttccctttgcatctccttcagttagtggttcctacttcgttgcaactc	5205100

AGI:	At1g15120.1
Description:	ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative. similar to ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative [Arabidopsis thaliana] (TAIR:AT2G01090.1); similar to hypothetical protein OsI_034030 [Oryza sativa (indica cultivar-group)] (GB:EAY80071.1); similar to Os11g0162200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065827.1); similar to ubiquinol--cytochrome-c reductase, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX95093.1); contains InterPro domain Ubiquinol-cytochrome C reductase hinge; (InterPro:IPR00342
Range:	from: 5202849	to: 5204188	Orientation: Forward
Links:	TAIR MIPS

AGI:	At1g15125.1
Description:	S-adenosylmethionine-dependent methyltransferase. similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G68040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68782.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299)
Range:	from: 5204620	to: 5205907	Orientation: Forward
Links:	TAIR MIPS

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