AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
-------->HAHB4 -------->ATHB1 <----------DOF2 <-----------GT1
ccattaccaccattcaatttttctgtctttaattattggttccagttttgttattctggtctattattttgtattatcatcattctatcaaacagattat	5202400
<------NtERF2 ----------->RAV1(2) ======================== >>>>>>>>>ARR2 ------>NtERF2 ---------->DOF2 <------ZmHOX2a(1) ----------->HVH21 --------- ----------->GT1 ----------->GT1 >>>>>>>>>ARR1 --------->ALFIN1 <
ttgttttgttgaaggaaatgaaaaaaagaagaagaaagaatcaaatatgataaattgaggataatattaagattgtgtgacctgccgtgccgcccaacaa	5202500
<---------O2 ----------->HVH21 ===RAV -->RAV1(1) ----------->GT1 <-----------GT1 -----------HVH21 <-------TEIL ------>NtERF2
catgtcacatggtatcttaggtttgcaaattcgtaatttgacatcttcgacgacaattttgactatctatctaatcttaacatcactcttccatcatcac	5202600
--------------->AGL15 --------------->AGL15 ----------------->AGL3 <----------TaMYB80 ----------------->AGL1 ======================================================================MADS_MADS <----------ID1 <-----------HVH21 ----------->HVH21 <---------------AGL15 <----------DOF2 ---------->DOF2 ---------->TaMYB80 <-----------------AGL1 ------>ZmHOX2a(1) ---------->DOF2 <------ZmHOX2a(1) <------ZmHOX2a(1) <------ZmHOX2a(1)
ttcctattttattccaactttcttaaagaagccaaaaaaaggatgatgtcagaagttaaggaatattctgacaaggataggatgcccttaagggaatcta	5202700
---------->DOF2 <-----------TBP <----------DOF2 <------------CBF <----------DOF2 <----------DOF2 ---------->DOF2 <------
gagtcttgaatgggcttttagaattccaagaagctagggaatctcgagtctttaatgggcttttaaagtttcaagaatcaaaggcccaaattgcatattt	5202800
------------>CBF <-----------HVH21 --- -----TBP ---------->DOF2 ------->TEIL *TSS <----------DOF2 ------>ZmHOX2a(2)
gtagcccgtcggaaacgcaatgaaaatgatgaatctgaagactgactcaaacaacatctctgtagggttcttcttccttgcttcttcgagtctcgatctc	5202900
<-----------GT1 ========================HOX2a_HOX2a =========================HOX2a_HOX2a ----------->GT1 ------>ZmHOX2a(1) <----------DOF2 ------>ZmHOX2a(2) <-----------RAV1(2) <----------DOF2 ------>ZmHOX2a(2) <------ZmHOX2a(2) --->ZmHOX2a(1) <----------ID1 <------ZmHOX2a(2) --------->AGP1 <------
ctctctcaatctcaggtaacgccaaaatcctctttttattcatgggatcttttataccaaattcgatttcttcattttgagatctgtgaatatcatcgtc	5203000
------->TEIL <-----------RAV1(1) <-----------GT1 -----HVH21 ------->TEIL ----------->HVH21 <----------DOF2 ----
ccacgaaccaatcgaatctgttgttgtctgacattaattttcatttctatctcttgcagtcttcagcttccaattgactttcaacatgtaagcttattcc	5203100
------>ZmHOX2a(2) ------->TEIL -->ZmHOX2a(1) <-----------GT1 <---------AGP1 <----------DOF2 ------->TEIL
ttaaactcgataccttcttaccaatctccaatctccaatcatgttgtgtagatggatctctaacatatgtagaccctttagtattcgtgtctgaatctct	5203200
------>ZmHOX2a(2) --------->AGP1 --------->ALFIN1 <------ZmHOX2a(2) <--------HAHB4 <-----------RAV1(1) <--------P ----------->ARR10 <-----------GT1
agactggaatcattttttttttttattgtggctctatagttgtgtaggggtcggtctatgattagatccgattctattcatttttctggcttatgttttc	5203300

AGI:	At1g15120.1
Description:	ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative. similar to ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative [Arabidopsis thaliana] (TAIR:AT2G01090.1); similar to hypothetical protein OsI_034030 [Oryza sativa (indica cultivar-group)] (GB:EAY80071.1); similar to Os11g0162200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065827.1); similar to ubiquinol--cytochrome-c reductase, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX95093.1); contains InterPro domain Ubiquinol-cytochrome C reductase hinge; (InterPro:IPR00342
Range:	from: 5202849	to: 5204188	Orientation: Forward
Links:	TAIR MIPS

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