AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
------->TEIL --------------->AtSPL8 ------->TEIL <-----------GT1
aattactgtatgtaccaaaaccacatttataccaaaccgcatcataaaataaaataaaaattcttaaggcctgttttgtagattttgtaagagtttttgg	5198600
<-----------GT1 ----------->GT1 ----------->GT1
tttttgttttttaaaaacttattttcataccaatcaagattttaaaattttggtttccctacaatttagtaaaactattttattgtaattttccattcat	5198700
<------ZmHOX2a(1) ----------->GT1 <xxxxxxxxxxxxxxxx smallRNA(i)
gattttagttttttagtttttgtaaaatttaggaaatctagtttttgttcaatcaacgttatttttctcaaaaaccaaaaaccattttttggagattttt	5198800

tgaacaaaaaatataataacaaaaatctaaaactaaaatctaaaattcagaaactaaaatctaaactcaaaaactaaattaaaaatcagggcctaaattt	5198900
<------------CBF ---------->DOF2 < ----------->RAV1(1) <-----------GT1 ----------->TBP -------
tgacataatatggatagatgatgatagtgagaccaaaccacataatattgcatattttgatgtcaccatttgatagcctataaaaaggagaagaagcaaa	5199000
----------->GT1 <---------AGP1 ----------->RAV1(1) ----------->ARR10 ---------->DOF2 ----------->GT1 ------->TEIL --------P ---------->DOF2 ---------->DOF2 ------>ZmHOX2a(2) <-----------ARR10 --->DOF2 *TSS --------->ALFIN1 <------ZmHOX2a(2)----------->RAV1(1)
gggtagttctggaaaaaaagggaatcgtgggggaaagaaagcagagtcgttttcagatcgtgaatagaagcagcagcagaagccgtatctatccctctct	5199100
------>ZmHOX2a(1) --------------->AtSPL8 --------------->AtSPL3 ----------->HVH21 <-----------GT1 <----------DOF2 <----------DOF2 <----------DOF2 ------>ZmHOX2a(1)
ctctctctctctctctctctctctctctctctctactttgaccgttcctcttctttttattcatcaacatcatcgagctttctactacttggattcctac	5199200
<---------------AGL15 <----------DOF2 --------------->AGL15 <-----------ARR10 <-----------RAV1(2) <----------DOF2 ------>ZmHOX2a(1) <-----------------AGL1 ------>ZmHOX2a(1)
ttcttcttcttcttcctctgattctctcccattccaatcaatctctagggttcttcttcaggtatctcaaatctcctctcttttctttttattgctaacc	5199300
---------->DOF2 ---------->ID1 <-----------GT1 <----------DOF2 <----------DOF2 xxxxx
attttcatttactttggcttatttttaagtttaatcttcttctgatattgcgtctgcttttttacctctgcaaagacagaacctttctctgtctctctct	5199400
<----------DOF2 ------->TEIL --------------->AtSPL8 ------->TEIL <----------DOF2 xxxxxxxxxxx>smallRNA(i) ----------------------->TaNAC69(2) <------ZmHOX2a(1)
gcttgtaccttgtaccttttctctctgtatacactccattgtctgccttttctcgtctctcttctcttacagtttttattcattaatttctctcgaggat	5199500

AGI:	At1g15110.1
Description:	phosphatidyl serine synthase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO68129.1); similar to hypothetical protein OsI_000142 [Oryza sativa (indica cultivar-group)] (GB:EAY72295.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42217.1); contains InterPro domain Phosphatidyl serine synthase; (InterPro:IPR004277)
Range:	from: 5199013	to: 5202170	Orientation: Forward
Links:	TAIR MIPS

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