Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Publications Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100   >GAMYB                                 <-----------HVH21                                     <------ --GT1                                  <-----------TGA1                          <-----------GT1   aaaatatgtcttatttaactgggataaatgtttggagctaaacgtcactaaaactgttcttgattaattgtaactgggaattaattacgctaacaataat  1818000                                                                            <-----------GT1                                                                    <-------GAMYB                                           ----------->GT1     ---------->ID1 --ATHB1                     ----------->GT1                 <-----------RAV1(1)                    <   ttaaaacgaaacatatattttgcgtatactaatgttaattcaagaatgtaaattccagggtatttgtcgcagttgtttatactaaatattaattcgctca  1818100                                            ---------->DOF2                                       <-----------------AGL3       ----------->GT1               ------->TEIL  <-------TEIL -------TEIL      <-----------GT1    -------->P <------ZmHOX2a(1)                              <-----   gattcaagaatgtaattattttacaagaattttgttatctaccttcaaaaggatacacaaatctatcagattatatattatttgaatgttgactcaactt  1818200                                       ----------->GT1                                       <------MYB46                                       <------MYB83                             <----------DOF2 -----DOF2                <-----------GT1       ---------->DOF2                <-----------GT1   tccccctagtactactgtttcttaattcttacttttttgtttggtgaaaacaaagtattaattaaattcccactatatatataacaaattttaagaaaat  1818300                                                                             ---------->DOF2       --                                                                            ------->GAMYB    <-------                                                                          -------->P        <--------                             <----------DOF2                     ------------>CBF       <----------DOF2                             ------>ZmHOX2a(1)                  <-----------GT1      <-----------ARR10   aattaattccataaactcatagagttgcatccttttaaaaccctcaacatgtccatctctaccgattaacaatatcaaccaaaggcatatctttttatct  1818400          <---------------AGL15          --------------->AGL15          ------>ZmHOX2a(1)         ----------------->AGL3               *TSS                                                --- ---->ZmHOX2a(1)          ------->TEIL   ------->TEIL       ------>ZmHOX2a(1)                    <--- ----GT1 <-----------------AGL3    <-----------RAV1(1)   ------>ZmHOX2a(1)               ---------->DOF2 ---GT1  <-----------------AGL2  <----------DOF2  <-----------GT1           ------>ZmHOX2a(1) <------   ccttcttccttcctatttttggctaatgaatgtctctttgttgcatctcttgtaacttcctcctagatttttgaattcctgcccttatccaagaagccag  1818500                                                                                           <---------                            <---------PCF2                                                 ----------  ----------->GT1        --------->ALFIN1                                                 ----------- ----------->GT1       <---------O2                      <---------ALFIN1                ------>ZmHOX2a(2) ------->DOF2          --------->O2                    <---------ALFIN1      ---------->DOF2 ---ZmHOX2a(1)        <------NtERF2                  ------>ZmHOX2a(1)   <----------DOF2<------ZmHOX2a(2) -----RAV1(2)      ------>NtERF2            <----------DOF2   ----------->RAV1(1)      ------->TEIL   gaaagggtaaaagattttctcggcctcgtggagccctcaccattatcttttcttcctccacacgcaacactacaactttaaaagagatggatccgacaga  1818600      >>>>>>>>CAMTA3                        <------ZmHOX2a(2) --HVH21                                   <-----------HVH21 ->RAV1(1)                        ------>NtERF2                                                 ----- >HVH21 --------->ALFIN1         ----------->HVH21  ---------->DOF2                     <-----------GT1   gctaaaacgcgtgttccaaatgttcgacaagaacggggacgggacgatcacggggaaagagctgagcgagacactacgaagcctagggatttacatcccg  1818700                                --------->TGA1a                                --------->O2                                <---------O2                                <---------TGA1a                            <------ZmHOX2a(2)    <-------TEIL        <------MYB83 ------>HVH21       ------>ZmHOX2a(2)           --------->ALFIN1     <------MYB46                  <-   gacaaggagttgactcaaatgatcgagaagatcgacgtgaatggtgatgggtgcgtggacatagacgagtttggtgagctatacaagacgataatggacg  1818800                               <----------DOF2         >>>>>>>>>TBF1 ---------->DOF2                                  --------->ALFIN1       ------ -----ZmHOX2a(1) <------ZmHOX2a(1)                          ----------->GT1              <-------GAMYB   aggaagacgaagaagaagaggacatgaaagaagctttcaatgtgtttgatcagaatggagatgggtttataacggtggatgaattgaaggcggttttgtc  1818900  Previous    Next  AGI:  At1g05990.1    Description:  calcium-binding protein, putative. similar to calcium-binding protein, putative [Arabidopsis thaliana] (TAIR:AT4G03290.1); similar to calcium-binding protein [Lotus japonicus] (GB:CAB63264.3); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Parvalbumin; (InterPro:IPR008080) Range:  from: 1818446    to: 1819039    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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