Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------YAB1   <---------ARR11(3) --------->DOF2               --------->ARR11(3) -------AHL20(2)           <---------AHL20(2)        ----------->GT1 ----->AHL20(2)       --------->AHL20(2)           ---------->DOF2                                --- ->TEIL   <---------AGP1   --------->AHL20(2) --------->AHL20(2)--------->YAB1                   <---   ttaaaagcactagttctgattaaactaaataaaatctttgaattttaaaaatataaagataaactttcatcaatatgctataagttcaatactgaaacta  129700                                                                                               <-----                                                                                        --------->ANAC58                                                                                        --------->ANAC58           ----------->GT1                                                          --------->ANAC55(2)      --------->AHL20(2)                                                            --------->ANAC46     <---------AHL20(2)        --------->CCA1(2)       --------------->AtSPL3       --------->ANAC58     --------->AHL20(2)     ----------->GT1            --------------->AtSPL8       <---------ANAC55(2) -------->GT1           ---------->DOF2              --------->MYB52(1)             --------->ANAC58 ------TOE2(3)<---------AHL20(2)  <-----------GT1   --------->RVE1(1)               --------->ANAC55(1)   atgttatataaattagttaattgcataaaagggatataacaaaattcagagaaaatatcggtaccaaaaaaaaaacagttgtaaacacgcaagaaatatg  129800                                                                              <------MYB46(1)                                                                              <------MYB83                                                                           <---------MYB52(1)                                                                          --------->LBD16                                               --------->ARR11(3)        <---------HSFB2a(2)                                  <---------AHL20(2)                     --------->HSFB2a(2)       --------->TOE2(3)          --------->AHL20(2)                     --------->ANAC46       -----    <-----------GT1              --------->AHL20(2)                     <---------LBD16         ----- ----YAB1              <---------YAB1          <---------ARR11(3) <---------MYB52(1)            -----   aaaattttacataaattcgaaaatgatgctagaaaataaatcacacacagaccttcaaaatagcctccgtttcatccggaaggtttacaatgacatccac  129900                                                                                   ----------->GT1                                                                           <---------MYB46(3)                                                                       --------->ATHB51                                                                       -------->ATHB1                                                                       <---------AHL20(2)             <---------ZAT18            --------->YAB1                 <---------ICU4         --------->ARR14(2)            --------->ICU4                  --------->ATHB12         <---------ARR14(2)--------->DAG2                              -------->HAHB4     --------->LBD16      ---------->DOF2 <---------YAB1              <---------YAB1                <    --------->LBD16       --------->SPL7<---------ICU4                <---------ATHB51    <---------YAB1   <---------LBD16       <---------MYB52(1)--------->ATHB12        --------->AHL20(2)     --------->AHL20(1)  <---------LBD16       <-----------HVH21 --------->ICU4           --------->AHL20(1)     <---------AHL20(2) ---->ANAC58 --------->ZAT18  <---------ANAC58                     <---------AHL20(2)     --------->AHL20(2) ---->ANAC46 --------->ZAT14  <---------ANAC46         <---------ZAT14--------->ICU4     --------->AHL20(2) ---->ANAC58 <---------ZAT14  <---------ANAC58<-------TEIL        --------->AHL20(2)     <---------AHL20(2)   gataaccgggagaactgcacataaaccgtaaggcgtaaaccatcatgattcatatagagaactgagaaattaattattggttaagaagtaattttattga  130000                                   <---------DAG2                              <------MYB83                              <------MYB46(1)                              <---------DEAR3(2)                             <---------------AtSPL8                             <---------------AtSPL3                             --------------->AtSPL8                             --------->MYB111(1)                             <---------MYB46(3)                             --------->MYB46(2)                            <--------P                            <---------MYB55(1)                           <-------GAMYB                           <---------ANAC58                           <---------ANAC58                          <---------DEAR3(2)                          --------->MYB55(2)                          <------MYB46(1)                          <------MYB83                          --------->MYB52(2)                          <---------MYB46(3)                         <---------TOE2(2)                         <---------AtMYB61                         <---------TOE1(2)            <---------TOE2(3)--------->MYB59                                    <---------MYB46(3)       --------->ATHB12 <---------MYB52(1)                                 --------->LBD16      <---------YAB1   <-------GAMYB<----------DOF2                 ---------->ID1      --------->ICU4  <---------MYB46(3)                <---------CCA1(2)  <---------LBD16 -------TEIL<---------TOE1(3)--------->MYB111(2)  <<<<<<<<<TBF1<----------DOF2<-------GAMYB   aattcatattgattaaggttttcgtcgttggttggtacctttctcttccttcttcttcttatctccttttgtctttccacggttgttcttgggagccatt  130100                                                                                    <------------CBF                <----------DOF2                                               --------->YAB1             <-----------GT1                                                  <---------ICU4        <----------DOF2                     --------->ARR11(3)               <---------ATHB12        <---------DAG2                      <---------ARR11(3)               --------->ICU4     <---------ARR11(3)                    --------->CCA1(1)             ------------>CBF  <---------HSFB2a(2)    <------------CBF  --------->RVE1(1)          <------------CBF      <--------  --------->HSFB2a(2)  <---------AHL20(2)--------->YAB1              --------->MYB52(2)     ---------  --------->HSFC1(1) <----------DOF2     --------->AHL20(2)      ----------->GT1  <---------YAB1   tcttctagagctttttttcttttcttttattgaaataaacaaataatatctgaaaacaaattcaacttggttaattgcaataatctcattgtcaaatatg  130200                                                                 --------->ANAC46 <-----------ARR10                                  ---------->DOF2             --------->ARR14(2)  --------->GLK1(2)         <---------AHL20(2)  --------->TOE2(3)                <---------ARR14(2)  --------->ARR11(3) -ARR14(2)                   --------------->AGL15       ---------->DOF2          <---------ARR11(3) >ARR14(2)          <------ZmHOX2a(1)  ------------------------>ANAC81       <-------TEIL   cattcaaatgtataattttgtaggactcaaacctcataaagaacccataaaactaaaactaaagtatacgatataaacgttcaaaatcttatccaaaaca  130300                                                                  <---------At5g28300                                                                 <-----------GT1                                                                 <<<<<<<<<GT-2                                                              <--------ATHB1                                                              --------->YAB1                                                              <------------ATHB5                                                         ------------>CBF                                                     <---------AHL20(2)                                                    --------->AHL20(2)                      ---------                                                    <---------AHL20(2)                   --------->At4g35610                             ------->TEIL  <---------RVE1(1)  <---------ICU4             <---------At4g35610                          --------->ANAC58 --------->GLK1(1)  --------->ATHB51      <---------ANAC58                          --------->ANAC58<---------ARR11(3)  <--------HAHB4        <---------ANAC46                          --------->ANAC46--------->ARR11(3) --------->ICU4         <---------ANAC58                        --------->ZAT6    --------->ARR14(2) <---------ATHB51      <---------LBD16                 --------->AHL20(2)       <---------ARR14(2) <---------ATHB12 <------ZmHOX2a(1)                 <-----------TBP          <---------GLK1(2)  --------->AHL20(2) ---------->DOF2   aaatggtttactgaaacatatatataacacgaacttggaaaacagatattcaaatttttttcaataattaccgagtgagaggaatagcgggagctaacag  130400                     ---------->DOF2       --------->CCA1(2)      --------->AHL20(1)          >>>>>>>>>NAM                                   --------->At4g35610     --------->AHL20(2)       --------->MYB52(1)                               --------->DAG2       - >>>>>>>>>>GT-3b  <---------------AGL15     ----------->GT1                   ---------->DOF2  ------ >MYB52(1)        --------------->AGL15 ---------->DOF2             <---------MYB46(3)        <------   aagaaaaatatatgaaaattctaaaaagagaataagggatgagaaagagtttataagagagtttgtttagtggttcgaagaaaagctgaaactggagaaa  130500                                                                                  <---------At4g35610                                                                   <------NtERF2<-----------RAV1(2)                                                       <------ZmHOX2a(1)     --------->YAB1                                                     --------->ANAC58   <-------TEIL <-----------HVH21                 <---------TOE2(3) --------->ANAC58--------->GLK1(1)           <--- -------->ALFIN1                 ---------->DOF2     <---------TOE2(3) --------->GLK1(2)        <---- --->MYB52(1)            ----------->GT1        <---------ZAT6   <---------DEAR3(1)             <---- ---ARR14(2)            ----------->GT1       ----------->GT1    <---------ANAC46 --------->At4g35610   cggtgtgagagagagacacagagagtgtgttaaaaaaaaggtttgagagagtgataaggaaggaagggcggagattcaatagtcagatggctagaatggc  130600  Previous    Next  AGI:  At1g01320.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to binding [Arabidopsis thaliana] (TAIR:AT4G28080.1); similar to binding [Arabidopsis thaliana] (TAIR:AT1G15290.1); similar to putative tetratricopeptide repeat(TPR)-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84544.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39777.1); similar to hypothetical protein OsI_024877 [Oryza sativa (indica cultivar-group)] (GB:EAZ03645.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetra Range:  from: 121124    to: 130099    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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