Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ---------->DOF2                                          ------>ZmHOX2a(2)                                         --------->CCA1(2)                                         <------ZmHOX2a(2)                                        --------->AGP1                                        --------->ARR11(3)                                        <---------ARR11(3)                                   --------->TOE1(2)                                --------->ARR14(2)                                <---------ARR14(2)              ----------->GT1                                --------->ARR14(3)         --------->ATHB12                                <---------ARR14(3)        <---------YAB1       --------->DAG2                 --------->ETT(2) ------>ZmHOX2a(2)       --------->ICU4      ---------->DOF2                 <---------ETT(2)<------ZmHOX2a(2)     --------->ICU4   ----------->GT1           <---------YAB1       --------->ARR11(3)  <------NtERF2  --------->YAB1 ------->DOF2--------->ARR11(3) <---------ARR11(3)<---------DEAR3(1)   <---------TOE2(3)   aaaagagcgtttgatgatatcgacattctaacaagatcgtgagatctaaaggtcgtcgtgatgatttagtaataagataaaaaagtcgtagcaacgtttt  116500                                                                        <-----------GT1                                                                  --------->ICU4                    <                                                            <---------------AtSPL8                  <                                                            --------------->AtSPL8            <------                                                            <---------ICU4                   <-------              ---------->DOF2      <---------ANAC46    <---------AHL20(2)                    --------         ----------->GT1 <---------MYB52(1)            --------->AHL20(2)                 <---------GLK1(2)   tttggtttaaaatgtaaaaagaagaccgtgatgcattgtttgtaatgtatacatgaataaaataagtacttatttaacaacgtagtgtattagattatct  116600                          <---------------AGL15                          --------------->AGL15                         ============================================================================                         <-----------------AG                         ----------------->AG                                               <--------                         <-----------------AGL1                                             ---------            <---------AtLEC2                                                                -------->ATHB1       ------->TEIL      ----------------->AGL2                                             ---------    --------->ANAC55(2)  ----------------->AGL1                                            --------->ICU4    <---------ANAC55(2)<-----------GT1                                                     <---------AHL20(2) -----------TGA1      <-----------GT1--------->HSFB2a(1)                                   <---------ATHB51 -----------HVH21------->TEIL        <---------HSFB2a(1)                              ----------->GT1 ---YAB1    <---------ANAC58   <-------MYC3                                        --------->ALFIN1 --ARR11(3) <---------ANAC58   ------->MYC3                                        <---------ANAC46 ->ARR11(3) <---------ANAC46<---------ALFIN1     <---------ZAT6            ------>NtERF2   <---------YAB1   ttcgtcatgtatttgcatgtatattttcccccatgtggaatgtttcagtttgtgttatctcaagagcgaaaatgtgccaccaattgtggggaaattattg  116700             --------------->AGL15                           ----------->GT1            ----------->GT1             <---------------AGL15                          <---------YAB1              <---------ANAC55(2)     --------->AHL20(2)                                   -------->HAHB4                --------->ANAC55(2)     <---------AHL20(2)                                --------->YAB1                 <---------TGA2(2)   --------->TOE2(3)                                  <---------ATHB51        <---------ICU4  <--------HAHB4                                      <---------AHL20(2)      --------->ATHB51  --------->ATHB12                                    --------->ICU4          --------->AHL20(2)  <---------ICU4                                      --------->AHL20(2)      <---------AHL20(2) --------->ICU4                                      --------->AHL20(2)      <---------AHL20(2) <---------YAB1                                <-----------GT1   --------->AHL20(2)  ----------->TGA1 ============================MADS_MADS     <----------DOF2--------->YAB1     --------->AHL20(2)    -- -ICU4    <-----------GT1                  <---------DAG2<---------YAB1      <---------AHL20(1)------ >ATHB12 --------->AHL20(2)             <-----------GT1<---------ICU4  --------->ANAC58 <---------bZIP60(1) >ATHB51 <---------AHL20(2)         <----------DOF2  <---------AHL20(1)--------->ANAC58 <---------ANAC46   ggcatcattaattaactactagtagtatataaaacgagcttttcacttttcacaaaataattatagttaaaataagcaaattatttcatgacgtaaaaaa  116800                  --------->ANAC58                  <---------ALFIN1                       ------->TEIL                            <---                  --------->ANAC46                       <---------ARR11(1)                      <---                  --------->ANAC58                       --------->GLK1(2)                      <----                <---------ALFIN1                         --------->ARR14(2)                     -----                --------->AtMYB61                        <---------ARR14(2)             --------->TOE2(3)           <---------HSFC1(2)                           <---------ARR14(1)         ------------>CBF           --------->HSFC1(2)                        --------->ANAC46             --------->ANAC46     ---------->DOF2 <---------ALFIN1             --------->MYB46(3)   <----------DOF2  --------->YAB1 -------->DOF2-------->P                      <---------MYB52(1)       <---------DAG2  <<<<<<<<<ARR1 ---->DOF2 --------->At4g35610               <-------GAMYB       <-----------RAV1(1)   <<<<<<<<<ARR2   agaaagaaaaagaagctaccacaccacttgcatatttcttaagtgtctgttatccaccgaatctaaaatgtcgcttttgcattcccacaatcttattaga  116900                                              <---------YAB1                                            --------->YAB1                                            <---------ICU4                                           --------->ICU4                                           *TSS--------->YAB1                                           <---------YAB1                                         <---------ICU4                                         --------->YAB1             --------->AHL20(2)                                        --------->ICU4              <---------AHL20(2)          --------->LBD16               <---------YAB1              <---------AHL20(1)             --        <---------LBD16               --------->YAB1                --------->AHL20(1)    <---------ANAC58 ------RVE1(1)                        <---------ICU4               --------->AHL20(2)     <---------ANAC58 ------CCA1(1)                     --------->YAB1                  <---------AHL20(2)<---------At4g35610 -----ARR11(3)        <---------YAB1 <---------YAB1       ---------->DOF2            --------->At4g35610 ---->ARR11(3)  ---------->DOF2   --------->AHL20(2)<------ZmHOX2a(1)         ---------->DOF2     <--   tatttgtattcccagagtaaaagtataattcaaacatttattattattattataggaattgaaagaaaattaaattttcaaaaagaccgcttacttgttt  117000                                          <---------HSFB2a(2)                                          --------->HSFB2a(2)                                        ------>ZmHOX2a(1)                                   <----------DOF2                  <------ZmHOX2a(1)                                <---------ALFIN1                   <------MYB83  <----------DOF2                             --------->ANAC58            ---------->DOF2>>>>>>>>>TBF1 ------->AHL20(2)            --------->ANAC46    ----------->GT1   <------MYB46(1)      <----------DOF2 -------YAB1                 --------->ANAC58    <----------ID1  <--------P ---------->DOF2   attatatacacagagaagagaacagtctcactcgccactttcctcgagaaaacgaaaaaaaaagatggtaggaagaagaaaagctttactcttttctctc  117100                                                                                         --------->TGA1a                                                                                         --------->O2                                                                            <---------ANAC58                                                                            <---------ANAC46          ------>ZmHOX2a(1)                               --------->LBD16   <---------ANAC58    <<<<<<<<<TBF1                         ------>ZmHOX2a(1)      <---------YAB1          ============   tgtttcttcttcctctctcttccttccttctcttcccttccatccttccaaaccctattccccaattctcattcccttccttgtgcttctcccgtctcat  117200                                             <---------LBD16                                           <---------ARR14(2)                               <---------ARR14(2)  ------>ZmHOX2a(2)                               --------->GLK1(2)  <------ZmHOX2a(2)     <---------ATERF1(1)       --------->ARR14(2)--------->ARR14(2)    --------->ANAC46          <---------GLK1(2)  <---------ARR14(2) -------->P------>NtERF2   --------->HSFB2a(2) --------->LBD16 ------>MYB83      <-----------HVH21       --------->ARR14(2) ------>MYB46(1)  --------->ANAC46   --------->ARR14(2)             <<<<<<<<<TBF1           --------- =========MYC_MYB--------->LBD16     <---------ARR14(2)    --------->LBD16                  <--------   tccaacccgactccgactccgagtcactgctagaatccgaatttgaatccggatccgactccgagtcttcttcttccattactctaaacctcgaccacat  117300                                                                  <------NtERF2                                                                  <---------ANAC58                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  ----------->GT1                                                               <------NtERF2                                                    --------->TGA1a                        ======================================MYC_MYB                        =============================MYC_MYB  ------>NtERF2                      <---                        ------->GAMYB --------->ZAT2<---------TGA1a    --------->GLK1(1)   ------>NtERF2                        ----------->HVH21           <---------O2 ------>NtERF2             <---------At4g35610                       --------->MYB46(3)  --------->TGA1a    --------->LBD16              --------->At4g35610                       <---------MYB55(2)  --------->O2      --------->ANAC46             --------->DEAR3(1)                      --------->ANAC46<---------At4g35610    --------->LBD16           --------->ANAC46 >AtMYB61    ----------->RAV1(1)      --------->At4g35610   <---------LBD16        <---------ALFIN1 < -ALFIN1  ------>ZmHOX2a(1)           <---------ZAT2--------->O2<---------ANAC46 <---------ALFIN1----   cgatgctctctcctccaacaaaacacccgacgagctattcagctcccgtctccaacgtgactcccggcgcgtgaaatctatcgccacactcgccgctcaa  117400  Previous    Next  AGI:  At1g01300.1    Description:  aspartyl protease family protein. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G61820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64659.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 116943    to: 118764    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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