Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                           <----------DOF2                                                         -- -------->DOF2       --------->MYB46(3)               ----------->RAV1(1)                          <- ------YAB1       <------ZmHOX2a(1)                --------->ANAC46                               --- ------HSFB2a(2)<---------TOE2(3)      ----------->RAV1(1)                  <---------MYB59   -------   tgaaagcatttgaaacttaaggaacaactctttagtctttgcaacaaaacaaaacacaacaaaaaccgaatatttaagcctaacttgaatgtgaattgat  108600                       --------->MYB52(1)                      --------->AtMYB61                      <---------ALFIN1                     --------->MYB46(3)                   <---------WRKY18(1)                <---------ANAC58                                                         ------------            --------->LBD16                                                              <----------- -----MYB46(1)  <---------ANAC58                     <---------ANAC55(2)                <------------ --------->GT1 <---------MYB46(3)                  --------->YAB1                       <------------ -----MYB83--------->LBD16                        --------->ICU4               --------->ANAC58 ------>MYB59<---------MYB52(1)                   <---------ATHB51             --------->ANAC58 -->ATHB12<---------LBD16                         <---------ATHB12           ---------->DOF2   ttggtcaaaattcccggtgcttgaccaccggtcttagttggcatactttgcaattatgtaaacaaaaattttaaaaattgaaagcaaacttctaaatttg  108700                                                                                              <------                                                                            --------->ANAC46<------ZmHOX2a(2)                                                                            --------->REM1(1)------>ZmHOX2a(2)  <------MYB46(1)                                                        ------>ZmHOX2a(2) --------->ARR14(2)  <------MYB83                                                          <------ZmHOX2a(2)  <---------ARR14(2) --------->MYB59                    <-----------ARR10                   --------->CCA1(2)  --------->ARR11(3) <---------AtMYB61                  --------->GLK1(2)                  --------->ARR11(3)  <---------ARR11(3) --->AGL15               --------->AtLEC2                              <---------ARR11(3)  --------->AGP1 ----AGL15             <---------AtLEC2                                <---------AGP1      <---------AGP1 -----AGL2  <---------MYB52(1)--------->TOE1(2)                        --------->ARR14(2)----------->ARR10 -----AGL3 <----------DOF2  ------->TEIL           <-----------HVH21   --------->AGP1<---------TOE2(3)   ggtttggtttcccctttagttatttccatgaacatgagaatctaatctcgagttgtcagatagtatttgtttagatctacaccagttgagatagatctgt  108800                                                <---------ICU4                                                --------->ATHB12                                                -------->ATHB1                         <---------ICU4         --------->ATHB51                        <---------ATHB51        <--------ATHB1                        <---------YAB1         <---------ATHB51                        --------->ICU4         <---------ATHB12                        <---------ATHB12       --------->ICU4            --------->WOX13(1)                 <---------YAB1           --------->AHL20(2)                --------->WOX13(1)                                    --           <---------AHL20(2)               --------->AHL20(2)                                 <-----       <---------AHL20(2)--------->ATHB51  <---------ATHB12                                <---------ANAC46       --------->AHL20(2)--------->ATHB12--------->WOX13(1)                             --------->YAB1 -----RAV1(1)  --------->YAB1      <---------ICU4                     --------->GLK1(2)<---------ATHB12   tgcaaatttttaattaatcaaaacccataattgaaaattatgtcaatcaattattgacaaaaaccatgacataatctaaggggttttcaatcgtcgtgta  108900                                                                          --------->MYB52(1)                                                                        <---------MYB59                                                                        <---------MYB52(2)                                     <----------DOF2              --------->MYB59     --------->At4g35610                                   --------->LBD16            ----------->GT1         <---------At4g35610                                 <---------LBD16           <---------ANAC46         <-----------RAV1(2) -------->DOF2                 --------->ARR14(2)      <------------CBF--------->At4g35610 ----CCA1(2)---------->DOF2    <---------ARR14(2)   ------------>CBF   <---------At4g35610      <----   tcaaagactcgagacaaagactaaatcgaaccagacccggtttaagtttctaaactcaattgtgtagttaagtagctaaccatggttcagatgaaagtct  109000                                <------MYB83                                <------MYB46(1)                                *TSS  --------->AHL20(2)                               --------->MYB59                   <---------ANAC58                               <---------AtMYB61                 <---------ANAC58                      <-------GAMYB <----------DOF2   --------->ANAC58                     --------->MYB111(2)           --------->ZAT18<-----------HVH21                     <-----------RAV1(1)      ---------->DOF2   <-------TEIL                     --------->MYB52(2)    --------->AHL20(2) --------->TOE1(2)     <---------ANAC58                     <---------MYB46(3)    --------->YAB1     --------->TOE2(2)     <---------ANAC58 ------DOF2          --------->MYB55(2) --------->YAB1--------->ANAC58              <---------ANAC46   ttttgttttgttttttgttttgtttgttggggtttggtcttttaataaaaaagagcacgaagaacatgcgtcggactctctctcttccttgaattcattc  109100                                                                                             --------                                                                                            <--------                                                                <---------GLK1(2)   --------->LBD16                                                                --------->ARR14(2) --------->HSFB2a(2)                                    <---------ARR14(2)       <---------HSFB2a(2)   <---------LBD16                                    --------->ARR14(2)       --------->HSFB2a(2)   <---------HSFB2a(2)           <------NtERF2   --------->ARR14(2)               <---------LBD16       <---------ANAC46          ------>NtERF2    <---------ARR14(2)         <---------AHL20(2)     --------------->AGL15          ----------->RAV1(1)---------->DOF2         <---------AHL20(2)      <---------------AGL15         <----------ID1--------->At4g35610       <------------------------ANAC81 <---------LBD16      --------->O2     <---------At4g35610      <----------DOF2 <---------ARR14(2)<---------LBD16      <---------DEAR3(1)<------NtERF2      <-------TEIL   <-----------GT1    <----------DOF2---------   aattggccacggcgacaaaacagggagccgatacagcgaaactgatacatctttttttattttctggattcttagggttctttttcggggaatttaggta  109200                   <---------ANAC58                   <---------ANAC46                                  <---------ARR11(3) <-----------ARR10                   <---------ANAC58                                  --------->GLK1(2)  --------->GLK1(2)      ---------->ID1 --------->ALFIN1                      --------->ARR14(2)           --------->ARR11(3) ->ANAC55(2)      <------NtERF2                            <---------GLK1(2)            <---------ARR11(3) -TOE2(3)    <-----------RAV1(1)                           <---------ARR14(2)      ----------->GT1 >MYB59      <---------AtMYB61  <---------AHL20(2)      --------->ETT(1)          <------ZmHOX2a(1)   atttgtttgtccattttggtggggtttgggagatttaaaatttgtgtttttttttgggtcggattctcaaaaatctgattttgaggagaaaatctcggtg  109300                                   --------->AHL20(1)           <------MYB83                          ----------->GT1                       <------MYB46(1)                         <---------ZAT6                         <---------MYB46(3)                    <----------DOF2<---------AHL20(2)          <---------MYB46(3)              --------->ARR11(3)   <---------AHL20(1)          --------->MYB55(2)              <-----------ARR10    --------->AHL20(2)          <---------AtMYB61              <---------ARR14(2)   <---------ARR11(3)         <---------MYB52(1)       <---------AHL20(2)              --------->ARR14(2)   --------->ARR11(3)        <-------GAMYB             --------->AHL20(2)              <---------ARR11(3)  --------->AHL20(2)        <-----------RAV1(1)   ---------->ID1  ---             <---------CCA1(2)  --------->AHL20(2)  ------>ZmHOX2a(1)<---------ANAC46 --------->AHL20(2)   gaagagacttgattcaaatcttctttactggtaaaaatatattcttctcaattcctcattttctgttggtggagtttgatttttgtcatttaattgttgt  109400                           <---------LBD16                         ------>ZmHOX2a(2)                        <---------GLK1(1)                        --------->GLK1(1)                        <------ZmHOX2a(2)                       <---------ARR11(3)                       --------->ARR11(3)                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                 --------->CCA1(2)                <---------AGP1                                          ----------->RAV1(2)                <---------ARR11(3)                             <---------ARR14(2)                <---------ARR14(3)                          <---------ANAC46                --------->ARR14(2)                        ------>NtERF2 <---------At4g35610                <---------ARR14(2)             ----------->GT1 --------->ARR14(2)                --------->ARR11(3)     --------->ANAC58   --------->LBD16                --------->AGP1         --------->ANAC58  --------->DEAR3(1)      <---------ALFIN1----                --------->ARR14(3)     --------->AtLEC2  --------->ANAC46    <-----------HVH21   ----  --------->AHL20(2)  --------->GLK1(1)--------->ANAC46 <---------LBD16 --------->At4g35610     <---- ------->DOF2 ----------->ARR10 --------->ALFIN1      --------->ANAC46 ------->TEIL             <----   taaagaaaataggggcaagatctgagatctctgggtgttccatgcaaaactgttatactccgccgtatatttgcatctgggtcacacttctaaaccctat  109500  Previous    Next  AGI:  At1g01260.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G46510.1); similar to Myc2 bHLH protein [Vitis vinifera] (GB:ABR23669.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 109032    to: 111609    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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