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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                        --------->ARR14(2)
                              <-----------GT1
                        <---------AHL20(2)
                        --------->AHL20(2)                                               <---------AHL20(1)
        ----------->GT1<---------AHL20(2)      <---------ARR11(3)                        --------->AHL20(1)
   <---------YAB1      <---------AHL20(1) <-------TEIL                     <----------DOF2
----->GT1              --------->AHL20(2)--------->CCA1(2)             <---------CCA1(2) --------->ARR11(3)
---TOE2(3)         <---------AHL20(2)   <---------ARR14(2)    --------->DAG2             <---------ARR11(3)
---TOE1(3)         --------->AHL20(2)  --------->At4g35610   ---------->DOF2         --------->YAB1
 
ttttttataagtgctaaaatttttaatttttttaaactaatcagatacaatatccaaaatactaaaaagtgtctctatctttttctattcaaaatattga  78600
                                                          --------->AHL20(2)
                        ----------->GT1                   <---------ATHB12    --------->TOE1(3)
           <---------AHL20(1)                         <---------ATHB12   <----------DOF2
           --------->AHL20(2)                       --------->WOX13(1)  <---------ICU4  <---------AHL20(2)
           --------->AHL20(1)                 ----------->RAV1(1)      --------->ICU4<---------ARR11(3)
           <---------ARR11(3)                --------->ANAC46  --------->MYB52(1)    --------->ARR11(3)
  <----------DOF2<-----------GT1           --------->ANAC46--------->AHL20(2) --------->TOE2(3)
 
gttgtctttgacaatattttaaactagttgtaaatcacagagataaacaccacataaatcaataaataactgtaatctttaccttgaagattttattcat  78700
                                                                                                  <-
                                                                                                 <--
                                                                             ---------->DOF2   <----
                                                                        --------->ANAC58      ------
                           <---------ANAC58                             ----------->GT1      -------
         --------->HSFB2a(2)                                            --------->ANAC58     -------
         <---------HSFB2a(2)        <-------TEIL              --------->ANAC58               <------
   <---------ARR11(3)      <---------ANAC58                   --------->ANAC58               <------
   --------->AHL20(1)    --------->MYB52(2)                 --------->MYB52(1)             <------ZmHOX2a(2)
   --------->ARR11(3)  <---------MYB52(1)       <---------AHL20(2)     --------->DAG2     <---------ARR14(2)
  --------->CCA1(1)    --------->DOF5.7(2)      --------->AHL20(2)    ---------->DOF2     --------->ARR14(2)
  --------->RVE1(1)   --------->TOE2(3)    <---------AHL20(2) --------->ANAC46--------->DAG2------>ZmHOX2a(2)
 
atgaaatatcttatagaaaatacttcgttagcttgaaaatgcatatttagtttaaatacaaataaacgaaacaaaaagcaaaaagcatagacggatccgt  78800
                               ---------->DOF2
----------ARR10        ---------->DOF2
-------CCA1(2)       --------->ANAC58
-----MYB52(1)        --------->ANAC58                                  --------->AHL20(2)
--->LBD16        --------->ANAC58                                    --------->ANAC58            <--
---->GT1         --------->ANAC58                                 --------->LBD16             <-----
-->ANAC55(2)     --------->AtLEC2                    <----------DOF2 --------->ANAC58        <------
---ANAC55(2)--------->ANAC58 <-------TEIL         ------>MYB83  <---------LBD16         ----------->GT1
---ANAC46   --------->ANAC58--------->CCA1(2)     ------>MYB46(1)--------->ANAC46   --------->AHL20(2)
 
aaatctactcttaagaagccatgcaagaaagattcaaagtcatcacaaaaaccaagcttttgtaatttgcgcaagtaattaacaaaaaaaaatgtaacaa  78900
                                                  --------->ARR14(2)
                                                  <---------ARR14(2)
                                                 <------ZmHOX2a(1)
                                       <xxxxxxxxxxxxxxxxsmallRNA(s)
                                      ----------->RAV1(2)
                                      <xxxxxxxxxxxxxxxxsmallRNA(s)
                                      <xxxxxxxxxxxxxxxxsmallRNA(i)
                                     <xxxxxxxxxxxxxxxxsmallRNA(s)
                                    <xxxxxxxxxxxxxxxxsmallRNA(i)
                                    xxxxxxxxxxxxxxxx>smallRNA(i)
                                    <xxxxxxxxxxxxxxxxsmallRNA(s)
                                   <xxxxxxxxxxxxxxxxsmallRNA(i)
                                   <xxxxxxxxxxxxxxxxsmallRNA(s)
                                  <xxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                  <xxxxxxxxxxxxxxxxsmallRNA(s)
                                  <xxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                 <xxxxxxxxxxxxxxxxsmallRNA(s)
                                 <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                                <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                               <XXXXXXXXXXXXXXXXXXXXMIR165A/B
                               <XXXXXXXXXXXXXXXXXXXXMIR166A-G
                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)
                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)
                               <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                               <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                               <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                              <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      ------->MYC3
                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        --------->YAB1
                          <---------ANAC46     <---------------------WRI1<--------HAHB4
                         <---------MYB46(3)   --------->LBD16            -------->ATHB1
           --------->ANAC58   <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         --------->ATHB12
           --------->ANAC58<---------ANAC46  <---------TOE2(1)           <---------ICU4       <-----
         --------->At4g35610 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <---------ATHB12  ------->TEIL
-------AHL20(2)          <---------LBD16     <---------TOE1(1)    <---------ANAC55(2) <-------MYC3
----------AGL15      =============================RAV        --------->YAB1       <-------TEIL------
-----------AGL3      <-----------RAV1(1)  <-----------HVH21 <---------YAB1--------->TOE2(3)  <------
 
taaatggtgatcagaggcaataacatgttgggggggatgaagcctggtccgaggatactctctatgatcacttgaatcattaacatacacatgtatatat  79000
           XXXXXXXXXXXXXXXXXXXX>MIR166A-G
           <------ZmHOX2a(2)
          <---------ARR14(2)
         <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
         <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
         <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
        <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
       ------>ZmHOX2a(1)
      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
   --------->ARR11(3)                                                    <-------TEIL
   <---------ARR11(3)                                                  <---------ARR14(2)
   --------->ARR14(2)            ------->GAMYB                 ------>ZmHOX2a(2)
   <---------ARR14(2)          --------->At4g35610     <---------YAB1  --------->ARR14(2)
--------->YAB1             --------->ANAC46          --------->YAB1    <---------GLK1(2)
----ARR11(3)   --------->ANAC46*TSS            ------->GAMYB --------->ARR11(3)                 <---
--->ARR11(3)<xxxxxxxxxxxxxxxxsmallRNA(s) --------->TOE1(3)   <---------ARR11(3)     <-----------RAV1(1)
---CCA1(2)--------->ARR14(2)   <---------At4g35610  <---------YAB1 <---------At4g35610 <---------REM1(1)
 
ctataatatcctcgatccagacaacattcccctcaactgaaatagcttaaccctcatgataatcgatcttagcagattcacaaatttttgttgtagagag  79100
                                  --------->ICU4                     <---------ARR14(2)
                               xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    --------->ARR14(2)
                             --------->YAB1                         --------->ATERF1(1)
                      <------MYB83<---------YAB1                    <------NtERF2
                      <------MYB46(1)                              --------->LBD16
                      <---------MYB46(3)                          <---------ANAC58
                     --------->MYB46(2)                           <---------ANAC46
                     --------->MYB55(2)                           <---------ANAC58
                     --------->MYB111(2)                       --------->ALFIN1
                     <---------MYB46(3)                  --------->ATHB12                        ---
                     --------->MYB111(1)                 --------->YAB1                          ---
                     <---------AtMYB61        --------->YAB1 --------->ALFIN1                 ------
                    <---------MYB55(1)       --------->ICU4 --------->ATHB12               ---------
                    <--------P xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------LBD16       --------->YAB1
    <------ZmHOX2a(1)<---------DEAR3(1)      <---------YAB1<---------YAB1            --------->AHL20(2)
------ZAT6        <---------MYB46(3)    <---------ZAT6  --------->ICU4             <----------DOF2
 
tgatagaggagagagagagagaggttggtgaatggtgatgatggtgttatgatgagggaatgatgagtggcggagacgaagatgggcttttaataagaca  79200
                                                          --------->YAB1
                                                        --------->AHL20(2)
                                                        <---------AHL20(1)
                                                        <---------AHL20(2)
                                                        --------->AHL20(1)
                                                       --------->YAB1
                                                      <---------YAB1
                                                    <---------AHL20(2)
                                                   --------->AHL20(2)
                                                   <---------AHL20(2)
                                               <---------AHL20(1)
                                           <---------AHL20(2)
                                          --------->ARR11(3)
                                          <---------ARR11(3)                    <---------ANAC46
                                          <---------AHL20(2)              <---------ARR14(2)
                                          <---------AHL20(1)              --------->ARR14(2)
                                          --------->AHL20(1)      ----------->TGA1
------->GAMYB                             --------->AHL20(2)    --------->WOX13(1)
-------->RAV1(1)              <---------DAG2   --------->AHL20(2) ----------->HVH21                -
------>MYB52(1)               <----------DOF2  <---------AHL20(2) <---------ATHB12               ---
--->ANAC46         ------>ZmHOX2a(1)     --------->AHL20(2)   <---------YAB1<---------At5g28300  <--
>ANAC46           --------->TOE2(3)    --------->AHL20(2)<---------YAB1  --------->At5g28300     ---
 
caacagaaacaggtcgtcattcctaaaccctagctttttcaaaaatatattttatttattataatatcaatgacgcagttactgcttatattttcgaatg  79300
          <---------TOE1(2)
          <---------TOE2(2)
     <-----------TGA1
     <-----------HVH21
    --------->ANAC58
    --------->ANAC46
    <---------O2
    --------->TGA1a                                                             <---------ARR14(2)
    --------->O2                                                                --------->ARR11(3)
    <---------TGA1a                                                             --------->ARR14(2)
    --------->bZIP60(2)                                                    --------->ANAC58      <--
    --------->ANAC55(2)                                             --------->GLK1(2)          -----
    --------->ANAC58                           <---------YAB1       <---------ARR14(2)   <---------ARR11(3)
    <---------ANAC55(2)                      <---------ICU4         ------->TEIL<---------ARR11(3)<-
    --------->ANAC55(1)        --------->AHL20(1)                --------->ANAC46        --------->ARR14(3)
   <-----------STF1            <---------AHL20(2)        <---------MYB52(2)--------->ANAC58  <------
  <---------ALFIN1            --------->AHL20(2)--------->ATHB12 --------->ANAC58        --------->ARR11(3)
---------->HVH21         --------->ANAC58    --------->YAB1      --------->ANAC58        <---------ARR14(3)
------>At4g35610         ----------->GT1    --------->ICU4      --------->LBD16 --------->GLK1(2)---
-------bZIP60(2)         --------->ANAC58<---------YAB1<-----------GT1 ----------->GT1   --------->ARR14(2)
-------->GT1    <-----------GT1--------->AHL20(2)   ----------->GT1 --------->ARR14(2)   --------->GLK1(2)
 
aggtgacacgtcatacgtttaacttggcaagaaaaaaattgattttgattatgatttgtaactaatccacgaatcggtaagaaaatctacaaaatcttca  79400
                                                                                  <----------DOF2
                                                                            --------->YAB1
                                                                          --------->ANAC58
           --------->GLK1(2)                   <---------AtMYB61          --------->ANAC58
-------AHL20(2)                       --------->ANAC46                    --------->ANAC46
---->TOE2(3)                   <---------AHL20(1)                     <-----------HVH21
--------AHL20(2)               --------->AHL20(2)                    --------->TOE2(3)
---YAB1   <---------GLK1(2)    <---------AHL20(2)                    --------->TOE1(3)       ------>ZmHOX2a(2)
------>AHL20(2)         <-----------GT1<---------At4g35610     <---------YAB1 <---------CCA1(2)   --
 
ttaatttgaaacagcttctggtctaattttctattttatttcagcaacttgtggtctaattagactatgaaaccttcacgcataactttctggtgatcca  79500
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AGI:  At1g01183.1   
Description:  MIR165/MIR165A; miRNA
Range:  from: 78932    to: 79032    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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