Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ---------->DOF2 ---NtERF2 ------>RAV1(1) ->NtERF2 ----ETT(2) ----->HVH21 --->DEAR3(1) --->ETT(2) -->ATERF1(1)                                                                       ---------->DOF2 -->RAP2.3(1)                         <---------ICU4                             <---------ANAC55(2) ->LBD16                              ---------->DOF2                            --------->ANAC58 --RAP2.3(1)             ---------->ID1                                --------->WOX13(1)           < --ATERF1(1)    <-------GAMYB   --------->TOE2(3)      <---------TOE2(1)         --------->ANAC58  -- -ATERF1(2)    <---------MYB46(3)  --------->YAB1     <-------TEIL   <-----------------AGL2        <- -DEAR3(1)   <------NtERF2      --------->YAB1      --------->TOE1(2)----------------->AGL3     <---- >ATERF1(2)<---------DEAR3(1) <---------TOE2(3)   --------------->AtSPL3   ---------->DOF2      ----- >DEAR3(1) <---------DREB2C(2)<---------TOE1(3)   <---------------AtSPL8 <---------ATHB12       -----   acagagtctaaagtcggcgattgttttgtcttaacgataataaaggccttaaaacgtacaaggtttacaaaaccaattaaggcccgtaaagcccattcat  25585500                                                                  <-----------GT1                                                                  --------->ANAC46               --------->ATHB12                                 <-----------GT1               <---------ICU4                                --------->ARR11(3)               <--------ATHB1                                --------->AHL20(1)              --------->ICU4                                 <---------ARR11(3)              <---------AHL20(2)                             <---------AHL20(1)              <---------YAB1                                 <---------ICU4            --------->YAB1                                 <---------TOE2(3)          --------->AHL20(2)                         <---------AHL20(1)          <---------AHL20(2)                         --------->AHL20(1) ---------ALFIN1        <----------DOF2  <---------YAB1   --------->YAB1                      <------ ------->ZAT14--------->AHL20(2)     <---------ARR14(2)   <---------AHL20(2)               --------->AHL20(2) --------ZAT14<---------ATHB51       --------->ARR14(2)   --------->AHL20(2)             --------->ANAC58 -----At4g35610<------------ATHB5    --------->KAN4(2)  --------->AHL20(2)    --------->ZAT6  ------- ---->At4g35610--------->ATHB51     <----------TaMYB80  <---------AHL20(2)  <-----------GT1<---------ARR11(3) ------>RAV1(2)-------->HAHB4     --------->YAB1    <---------CCA1(2)  --------->ICU4    --------->ANAC58   ctgcaccgctaaaaaaataattgggcctttactgaagcatattctaattttcttatatattaatattttcgccatatttaacactactaacaagaaatta  25585600                                              --------->ARR11(3)                  ------->TEIL                                     --------------->AGL15                     --------->ANAC58                                     <---------------AGL15                     --------->ANAC58                                 <----------DOF2                               --------->ANAC46  <---------MYB59  <---------HSFB2a(2)        <---------GLK1(2)           --------->PCF2 ---ATHB51         --------->HSFB2a(2)        <---------ARR11(3)      ---------->DOF2 -->ICU4        <-----------GT1 <----------DOF2            --------->TOE2(3) <---------ALFIN1     <--   tgggcctaattctatatttttccacaagaatgggcctttctgtataaagatttttcgaaaacgtttatgagccaaaggcccacgtacttcttaatgtata  25585700                                     <----------DOF2                       ----------->GT1                                  <---------RVE1(1)                <---------AHL20(2)                                 <---------ARR11(3)               <---------AHL20(2)                                 <---------GLK1(2)                <---------AHL20(1)              --------->YAB1     <---------ARR14(2)           --------->AHL20(2)  <---------AHL20(1)             <---------ATHB12    --------->ARR14(2)           <---------AHL20(2)  <---------ARR11(3)    <---------TOE2(3)          --------->LBD16 --------->ANAC55(2)--------->AHL20(2)    <---------YAB1            --------->HSFB2a(2)         --------->AHL20(2)      --------->AHL20(1)   <-----------GT1            <---------HSFB2a(2)         <---------AHL20(2)      --------->ARR11(3) ----ZmHOX2a(1)            <-----------GT1     <---------ANAC55(2)--------->AHL20(1)   ggaattaacattctaatcaaatttctatttttccagatactttcgcatcacgttttccatttttttaatttaatatttggaaaaaatattcaacagattt  25585800                                                                  --------->TOE1(3)                                                                  --------->TOE2(3)                                                            <---------HSFB2a(2)                                                   ------>ZmHOX2a(1)         <---------ARR11(3)           <---------TOE1(3)     --------->HSFB2a(2)         --------->ARR11(3)   <---------MYB52(1)  --------->TOE2(3)        ------->TEIL      --------->AHL20(2)      <----------DOF2  <-----------GT1  ------->TEIL   ----------->GT1       ---------->ID1 ----------->GT1     --------->HSFC1(1)  ----------->GT1   --------->ARR11(3)<---------TOE2(3)     <---------HSFC1(1)      --------->TOE2(3)   aaaactgataaaatctttataagatttgttccctttgtttaagggaaaatttccttatttttctcgaaccttatatgtgcctaaaaccctagtcgataag  25585900                                                                  <------ZmHOX2a(1)            <---------ANAC58                                   <-----------RAV1(2)          ---------            <---------ANAC58     --------->ARR11(3)            <---------HSFB2a(2)  <----------DOF2    <---------ANAC58       <---------ANAC46                    <---------LBD16     <---------ANAC58    <---------ANAC58       <---------ANAC58       <---------At4g35610              <---------ANAC58    <---------ANAC46       <---------ANAC58       --------->At4g35610         --------->ALFIN1-------   cgagagtcgtgtttccttgaagaatgaattcgtgtgatattgttccgatggaagcagagctaagtccaggagccatcgaagagtggctttcgacggtaaa  25586000                                                                              <---------ANAC46                                                                              <------MYB46(1)                                                                              <------MYB83                                                                             <------MYB83                  --------->ANAC58        --------->WOX13(1)                 <---------MYB46(3)                --------->MYB52(1)  --------->GLK1(1)                        --------->MYB59          <-----------------------TaNAC69(2)                                 <------MYB46(1)        ----------->TGA1           --------->ARR14(2)                      <--------P        ----------->HVH21       ------>ZmHOX2a(2)                         <---------ANAC58     --------->ICU4            <------ZmHOX2a(2)                          <-------GAMYB   ---------->DOF2--------->ANAC58 <---------ARR14(2)                     <---------ANAC58        --- >At5g28300<---------ANAC46   --------->ARR14(2)                         --------->ATHB12 <---------YAB1 --->DOF2--------->MYB52(1)   <---------ARR14(2)                         <---------MYB46(3)   -------   gcatggaaagatgacggagaacggaaaacgacgatcggatttgtccatcaaggtgaagagacatctctcggctcttggttgggtaatctcttactataac  25586100                                                                <---------ANAC58                                                                <---------ANAC46                                                                <---------ANAC58       --------->ANAC58                                  --------->At4g35610       --------->ANAC58                    <---------MYB46(3)<---------TOE2(3)  <---------ETT(2)  <----------ID1       <---------YAB1     --------->ALFIN1   <---------TOE1(3)  --------->WRKY38(1) ------->DOF2     ----------->GT1      --------->DAG2    <---------At4g35610    --------->ETT(2) -->YAB1 ---------->DOF2              ---------->DOF2<----------DOF2         <---------ANAC46    ----   aaaaggaacaagaaagagcagcgttataagtctcccaagggaaagtggttctactctttagctaaggcttgtatgagttgtgtcgaccaagactctcaac  25586200                                          <---------ATHB12                                         --------->ANAC46                                         --------->ANAC58                                  <---------ANAC58                              <---------ANAC58                              <---------ANAC58                         <---------ANAC58--------->ANAC58                         <---------ANAC58--------->AtLEC2                                      ------                         <---------bZIP60(2)                                                 -------- --->GAMYB          <---------ICU4<---------ANAC58              <---------AGP1  --------->YAB1-------   agcaactacaaattgttcccaaatatgacttgtcttgccttccaagcaatattgcctcagagtctagttctgatgtttcgaatcaaaaacagaagaaaag  25586300                                                     <---------ARR11(3)                                                     --------->ARR11(3)                                             --------->LBD16                                            --------->HSFB2a(2)                                            <---------HSFB2a(2)              --------->ALFIN1             <---------LBD16           <------MYB46(1)               --------->ARR14(2)    --------->DAG2                      <---------At4g35610        <---------At4g35610   --------->DAG2   --------->ARR14(2)  --------->At4g35610        <---------ZAT2  ---------->DOF2   <---------ARR14(2)  --------->ZAT2             --------->At4g35610 ----->GT1 <------MYB83         ---------->DOF2  ---------->DOF2<---------MYB52(1)                 <- -->DOF2 <--------P<------ZmHOX2a(1)    <---------ZAT2    --------->YAB1      --------->YAB1      <-- -->DAG2 --------->ALFIN1<---------AtLEC2<---------ARR14(2)    <-----------HVH21        -------------   taagaaaaggggtagggtcgaggatttggatgtcaaaagcacagctccggaaaaagataatcatccgtctgctgatttgatcaaaatcgttccaaatttt  25586400  Previous    Next  AGI:  At5g63900.1    Description:  PHD finger family protein. similar to PHD finger transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G58610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21435.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 25585924    to: 25587597    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version