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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                             <-------TEIL
                             ------->TEIL        --------->YAB1
--->TEIL                 --------------->AtSPL8 <---------ATHB12---------->DOF2
---ATHB12      ----------->GT1        <-----------HVH21   <---------ATHB12               <---------GLK1(2)
 
atttagcgagggtgagaaatgtcaattcaatgtacattctatgtcaattcaatgaaaacaaatgaagaaaagagacatgaaatatgtttccaaattctta  24311700
                          --------->ARR11(3)
                          --------->ARR14(2)
             --------->AHL20(2)                                         --------->YAB1
       --------->YAB1     <---------ARR11(3)                      <---------LBD16       --------->ATHB12
 
cttagaagaattagaatcaaataatacaatatctacatatgccatgagagacatatggaaaaccatgttttcggatgataaacttccaaattgatttgat  24311800
                                                                                           ---------
                                                                                           <--------
                                                                                           ---------
                                                                       --------->TGA2(1)  --------->KAN4(1)
                                                                       <---------bZIP60(1)<---------HSFB2a(1)
                                                                       --------->bZIP60(1)<---------KAN4(1)
                                                                       <---------TGA2(1)  --------->HSFB2a(1)
                                         <---------MYB52(2)          --------->At4g35610  <---------
                                         --------->MYB46(3)    --------->SPL7             <---------HSFC1(2)
                                --------->AHL20(2)--------->SPL7--------->MYB46(3)       <---------KAN4(2)
                            ----------->GT1--------->MYB52(1)<---------SPL7        --------->ALFIN1
                --------->AHL20(2)     <-----------GT1      ------>ZmHOX2a(2)     ------->MYC3     -
          --------->LBD16  <---------TOE1(3)    <-----------HVH21    <---------At4g35610 ---------->TaMYB80
          ----------->GT1  <---------TOE2(3)--------->MYB52(1)--------->MYB52(1)  <-------MYC3     <
 
atatactataaaccggcaaataaacaaattgaggttaaaatataacaaaccggtccggtctgatcgaacggctgatgtcataaaacgtggggaatattcg  24311900
                                                                                              ------
                                                                                             <------
                                                                                             <------
                                                                                             -------
                                                                                             -------
                                                                                             -------
                                                                                             <------
                                                                                             -------
                                                                                             -------
                                                                                             <------
                                                                                            <-------
                                                                                            --------
                                                                                            --------
                                                                                            --------
                                                                                            <-------
                                                                                            --------
                                                                           --------->ALFIN1 --------
                                                                           <------NtERF2   ------->TEIL
                                                                          --------->MYB55(2)--------
                                                                          <---------MYB46(3)--------
                                                                  <---------YAB1          <---------
                                                             <---------ANAC55(2)         <---------ZAT18
                                                             --------->bZIP60(2)  --------->ETT(2)
                                                             --------->ANAC58     ----------->HVH21
                                                             --------->O2--------->ALFIN1--------->ZAT14
       ---------->DOF2                                       <---------O2<---------ANAC46<---------ZAT14
 --------->YAB1                                              --------->ANAC58    --------->SPL7
>ARR14(2)                                       ---------->DOF2   --------->ICU4 --------->ATERF1(1)
-ARR14(2)                            <---------ANAC58        --------->ANAC46  ---------------------
>KAN4(2)        <-------GAMYB        <---------ANAC58        --------->TGA1a  --------->ATERF1(1)
-TaMYB80        <-----------HVH21 --------->ALFIN1           --------->ANAC55(1)<---------ATERF1(1)<
-------->AHL20(2)       ----------->GT1         =======================bZIP_DOF<---------SPL7<------
---------AHL20(2)<---------MYB52(1)  <---------ANAC46       <-----------STF1<---------ANAC46<-------
 
attaaaataacaaagactccgttacggtcgtaaataagtggtgtgagaaccgaaagtcaaaaacacgtcaatattggtgggggggacgaccgtgcacgtg  24312000
<---------ALFIN1
----->HVH21
-MYC4
-PIF5
>MYC4
>PIF5
>MYC2
-MYC2
>PIF4
>MYC3
-MYC3
--O2
->O2                                                                                               -
->ANAC46                                                                                          <-
->ANAC58                                                                                         <--
--ANAC55(2)                                                                                      ---
->ANAC55(2)                                                       --------->LBD16               <---
->ANAC58                   --------->LBD16                      <---------LBD16                <----
->bZIP60(2)               <---------ANAC58                      --------->SPL7                 <----
->TGA1a                   <---------ANAC46 <---------ARR14(2) <---------SPL7                 <------
---OsbHLH66               <---------ANAC58 --------->ARR14(2) <-----------HVH21              <------NtERF2
-->TaNAC69(2)            <---------LBD16 --------->LBD16 ------>NtERF2-------->P             <------
---------ZAT14  --------->LBD16      <-----------GT1     <---------ATERF1(1)               <--------
-PIF4<------ZmHOX2a(1)<------------CBF <---------LBD16  --------->DEAR3(1)            <---------ANAC58
--TGA1a       <---------LBD16      --------->AHL20(2)   <---------DEAR3(1)            <---------ANAC58
 
accacacaggaactaaacccggacgtattgcgcgaaaattaaaccggatttgataatcggcgactcgtccggcaacccttgttttgttttcgtctcggcg  24312100
                            <----------DOF2
----->ZmHOX2a(2)           <------------------------ANAC81              ----------->GT1
-----ZmHOX2a(2)       <---------ANAC58                                <---------At4g35610
-------ARR14(2)       <---------ANAC58                                --------->ZAT2
------>ARR14(2)       <-------GAMYB                        <-----------ARR10
---NtERF2            <---------MYB46(3)      <---------ANAC58         <---------ZAT2
-----DEAR3(2)        <------MYB83            <---------ANAC58     --------->YAB1                ----
-----MYB46(3)        <------MYB46(1)    ------>ZmHOX2a(1)  <---------ARR11(3)                 ------
---At4g35610        --------->MYB59 <-----------GT1        --------->ARR11(3)                 <-----
---LBD16       *TSS <---------AtMYB61<-----------GT1       --------->GLK1(2)     --------->TOE2(3)
-DEAR3(1)   ----------->RAV1(2) <---------AHL20(2)  ---------->DOF2   --------->At4g35610    <------
 
gatcgatttttcttcgtctgggtttggttgtctttttattttcctcttccttggccaaagaaaatcttatcgtagctgtgaaaaccctagtttctaatca  24312200
                                                          <---------ANAC46                <---------ANAC58
                                            --------->ARR14(2)                          <---------ARR11(3)
----->At4g35610          <---------YAB1     --------->GLK1(2)                       ---------->DOF2-
--->YAB1          <---------ATHB12          <---------ARR14(2)         <---------MYB52(1) <---------ANAC58
----ICU4         ------>MYB46(1)         <---------ANAC55(2)         <---------ANAC46   --------->ARR11(3)
---ATHB12        ------>MYB83            --------->ANAC55(2)      <-----------GT1<----------DOF2<---
 
tctcaattctctcattaacctatcaatttcgatagggtttgatcaagtatccgatttcatggtttgtattttccgtttaatagtctttaaaggtcttgtc  24312300
                                                                                               <----
                                                                                               <----
                                                                                               <----
                                                              --------->At4g35610             <-----
                                                             <---------MYB46(3)           --------->MYB59
                                                            <--------P                    <---------TOE1(3)
                                ------>ZmHOX2a(1)         <---------MYB46(3)     <---------ANAC58
                 <---------ANAC58             <---------MYB52(1)<----------DOF2  <---------ANAC58
-------->HSFB2a(2)              ================================HOX2a_HOX2a   <---------WOX13(1)  <-
-------DOF2      <---------ANAC58  <----------DOF2       ------>ZmHOX2a(2)  <---------ICU4<---------TOE2(3)
 
ttttggaatttcaagggttttcgtttcagtaactccttcttttttttctgttaatttagatcggttgctgtatggagactaattgctggagtttaggttc  24312400
                                                                                                   <
                                                                                          ------>ZmHOX2a(2)
                                                                           -------->ATHB1--------->CCA1(2)
                                                                           --------->ATHB51        <
                                                                          <---------YAB1 <------ZmHOX2a(2)
-----ANAC58                                                           ----------->GT1   <---------AGP1
-----ANAC58                          <---------ANAC46            --------->YAB1         --------->AGP1
-----ANAC46           <---------ANAC58                     <---------At4g35610          <---------ARR11(3)
--TEIL        <----------DOF2    <---------ANAC46  <---------ARR14(2)--------->MYB59---------->DOF2<
--------TOE1(2)       <---------ANAC58             --------->ARR14(2)<---------TOE2(3)  --------->ARR11(3)
 
gtgtgttttgaactgagcttttggttcttgtttgtgtctggtgttgaagacatggatttggaagctaattgtaaggtattattgtctgaaagatctatgg  24312500
           <---------AHL20(2)
           <---------YAB1                          <------MYB83
     <------MYB83                                  <------MYB46(1)                          <-------
     <------MYB46(1)                             <---------WOX13(1)                       <---------ANAC58
     <---------MYB46(3)                        <---------MYB46(3)                    <---------DAG2
   <--------P <---------YAB1                   --------->ATHB12                      <----------DOF2
 <---------MYB46(3)                           <---------YAB1                        <---------ANAC58
---------ANAC46                            --------->ALFIN1   --------->ALFIN1      <---------ANAC58
---------ANAC58                      <---------YAB1----------->GT1         ---------->DOF2<---------ANAC58
---------ANAC58       --------->ATHB12  ------->TEIL        <---------ANAC46    <----------DOF2
 
atgcttgttggtttataatttttgttgatttgaacttgttatgaatgtgttgattggtatatagagtggatgtttcaaaaaagctttgcttttccgtttt  24312600
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AGI:  At5g60410.1   
Description:  ATSIZ1/SIZ1; DNA binding / SUMO ligase. Identical to E3 SUMO-protein ligase SIZ1 (SIZ1) [Arabidopsis Thaliana] (GB:Q680Q4;GB:Q56YS2;GB:Q56ZS1;GB:Q67ZL3;GB:Q9FKK4); similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G41580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21812.1); similar to DNA-binding SAP; Zinc finger, MIZ-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABD33066.1); similar to hypothetical protein OsJ_016201 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32718.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type;
Range:  from: 24312116    to: 24318373    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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