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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
--------->
AHL20(2)
<------
MYB46(1)
<---------
AHL20(2)
----------->
GT1
--------->
YAB1
<-
--------->
MYB59
<---------
YAB1
<--
--------->
CCA1(2)
--------->
YAB1
---
--------->
ARR14(1)
<---------
ICU4
---
--------->
ARR11(1)
--------->
ICU4
<--
<---------
ARR14(2)
<---------
AHL20(2)
---
--------->
ARR14(2)
--------->
AHL20(1)
----
--------->
ARR11(3)
--------->
AHL20(2)
--------->
ZAT6
----------->
GT1
----------->
GT1
--------->
AHL20(2)
<-----------
GT1
----
YAB1
--------->
AHL20(2)
<------
MYB83
<---------
AHL20(2)
--------->
AHL20(2)
<--
attgagtagtaagtttagttgtttttatgagattatatagtaaaaagatttggtaaatgttatataaaaaaaattatgagaattaatttacactagaaaa
24257800
<---------
AHL20(2)
--------
AHL20(2)
--------->
TOE2(3)
-------
AHL20(1)
--------->
YAB1
<---------
AHL20(1)
------>
AHL20(2)
<---------
ATHB12
--------->
AHL20(2)
------>
AHL20(1)
--------->
ARR11(3)
--------->
AHL20(2)
-------
ARR11(3)
<---------
ARR11(3)
<---------
AHL20(2)
------>
ARR11(3)
<<<<<<<<<
RAP2.2
--------->
AHL20(2)
----->
AHL20(2)
--------------->
AGL15
------->
TEIL
<-----------
GT1
-------
AHL20(2)
<---------------
AGL15
<---------
YAB1
--------->
AHL20(1)
---
tatattttaaaacttacttcattttcaaattttagatatcaaatcatacaaaatgttgttttatgaaactaattaatatataaccttgtttgaagtagca
24257900
<------
MYB83
----------->
GT1
<------
MYB46(1)
<---------
TOE2(3)
<---------
ICU4
--------->
CCA1(2)
--------->
ATHB12
<---------
AHL20(1)
--------->
ICU4
<---------
AHL20(2)
<---------
YAB1
<---------
ARR11(3)
--------->
AHL20(1)
--------->
TOE2(3)
--------->
ARR11(3)
--------->
AHL20(2)
<-----------
GT1
--------->
ANAC58
<-----------
GT1
--------->
TOE2(3)
--------->
YAB1
<---------
ICU4
<---------
GLK1(2)
<
------>
ICU4
<---------
ATHB12
----------->
GT1
--------->
MYB59
--------->
ANAC58
<---------
RVE1(1)
atttttaacaagtcttcaaacattaatatatgaagagataataacattattaggttatactaatttccacaggctatcaaatgtagattttttgttcgca
24258000
<------
NtERF2
<---------
RAP2.3(1)
------>
NtERF2
<---------
RAP2.6(2)
----------------->
AGL1
<---------
DEAR3(1)
<---------
TGA1a
--------->
ANAC46
<---------
ANAC55(2)
--------->
YAB1
--------->
ANAC55(2)
<---------
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
<---------
MYB46(3)
--------->
AHL20(2)
<---------
DEAR3(2)
<---------
AHL20(2)
<---------
DAG2
<-----------
HVH21
--------->
AHL20(1)
==============================
bZIP_DOF
--------->
AHL20(2)
<----------
DOF2
--------->
bZIP60(2)
--
<---------
AHL20(2)
<---------
RAP2.3(3)
--------->
ANAC46
--
--------->
AHL20(2)
<---------
RAP2.3(2)
--------->
ANAC58
<-
---------
YAB1
--------->
MYB52(1)
--------->
ANAC58
<---------
YAB1
-----
ttataaattttttaataaacggcggctttatgtctgttccaagtcacgttccgaattggttcacattattcttcttagcattgtttgaaatattaaacta
24258100
<----------
DOF2
---------->
ID1
----------->
RAV1(1)
<---------
DAG2
--------->
RAP2.6(2)
<----------
DOF2
--------->
ZAT18
<---------
ANAC46
<---------
ANAC58
<------
ZmHOX2a(2)
<------------
CBF
<---------
GLK1(2)
------->
YAB1
------>
NtERF2
<---------
ANAC58
<---------
ALFIN1
<---------
At4g35610
------->
AHL20(2)
------------>
CBF
----------->
RAV1(1)
----------->
TBP
<---------
ANAC58
<-
--------
AHL20(2)
----------->
RAV1(1)
------>
ZmHOX2a(1)
<---------
TOE1(2)
<---------
ANAC58
<-------
---->
YAB1
--------->
ANAC46
<---------
ANAC58
<---------
ALFIN1
------->
TEIL
<---------
ANAC58
<-------
ataatatgagatcgaggccacaacaacaattgtgtgtctctctcctcccacattcccatcccatgtatatatacagatgcttggcttttccttttgcttc
24258200
--------->
WOX13(1)
--------->
ARR14(2)
<---------
ARR14(2)
<-------
TEIL
<---------
AHL20(2)
<---------
GLK1(2)
--------->
AHL20(2)
<---------
ICU4
<---------
ARR14(2)
*
TSS
<-----------
GT1
<---------
ATHB12
--------->
TOE2(3)
--------->
ANAC58
---------
DOF2
--------->
GLK1(1)
--------->
ANAC58
--------->
YAB1
--------->
ARR14(2)
--
ANAC58
<---------
CCA1(2)
--------->
ANAC58
--------->
ZAT6
--------->
ANAC46
-------
--
ANAC58
--------->
YAB1
------>
ZmHOX2a(2)
<---------
CCA1(2)
--------->
ANAC58
<------
acttttaatttctactcatatccatcattctctctgatctcaagaaataatctcaaatctcttacactcatagtcttcaagcaacttctcagattcagct
24258300
--------->
ARR11(3)
<---------
MYB59
<---------
ARR11(3)
--------->
GLK1(2)
--------->
CCA1(2)
<-----------
RAV1(2)
<------
ZmHOX2a(2)
<---------
MYB46(3)
<---------
ARR14(2)
-------
--------->
ATHB12
--------->
ARR11(3)
---------
<------
ZmHOX2a(2)
--------->
AGP1
<---------
ARR11(3)
---------
-->
At4g35610
--------->
REM1(1)
<---------
ARR11(3)
<---------
GLK1(2)
---
At4g35610
<-----------
GT1
--------->
ARR14(2)
----------->
GT1
<---------
TOE2(3)
ctt
atggatcatttgttacaacaccag
gtaaactacaattcaagatccacagtatctaacatcttgatgtgttttgttaatttgtctaattaagaatctt
24258400
<-------
------>
MYB83
<---------
TOE2(3)
--------->
ANAC58
------>
MYB46(1)
---------->
DOF2
--------->
ANAC58
--------->
ANAC58
<----------
DOF2
---------->
DOF2
--------->
ANAC46
--
<---------
AHL20(2)
<------
ZmHOX2a(1)
<---------
YAB1
--------->
YAB1
--------->
ANAC46
-->
YAB1
---------->
ID1
<---------
ICU4
<---------
YAB1
--------->
ANAC58
<-
>
GLK1(2)
<---------
AHL20(2)
--------->
YAB1
--------->
ANAC58
--------->
YAB1
<--------
>
ARR11(3)
<-----------
GT1
--------->
ICU4
--------->
ANAC58
<-------
TEIL
<---------
ALFIN1
gatgtgtttattttttctcttttaaag
gatgtttttgggaattataacaaagcaagagaagcaatgggactatcatattcatcaaacccaacaccgttag
24258500
--------->
TGA1a
===================================
<---------
TGA1a
--------->
At4g35610
<---------
At4g35610
==============================
MYC_MYB
--------->
At4g35610
<---------
ZAT2
<-------
MYC3
<---------
At4g35610
------->
MYC3
------->
GAMYB
--------->
LBD16
<---------
O2
<----------
ID1
<---------
DEAR3(1)
--------->
HSFB2a(2)
--------->
ANAC46
-------
--------->
MYB46(3)
--------->
MYB46(3)
--------->
DEAR3(1)
--------->
O2
<---------
ANAC58
--
MYB52(1)
<---------
HSFB2a(1)
<---------
bZIP60(2)
--------->
ZAT2
--------->
O2
------->
GAMYB
------->
MYB52(1)
------>
ZmHOX2a(1)
<---------
ALFIN1
<---------
O2
<---------
ANAC58
--------
DOF5.7(2)
----------->
RAV1(2)
----------->
RAV1(1)
<-----------
RAV1(2)
<---------
MYB52(2)
---
HVH21
--------->
HSFB2a(1)
----------->
HVH21
<---------
LBD16
<---------
TOE1(2)
--------->
MYB46(3)
ataacgaccagaagaaaccttctcctgcaacggctgtgacaaggccacagcctccggagctagctctcaggtgtccacgttgcgactcaacaaacacaaa
24258600
<-
--
<-
---
<---
----
--------->
CCA1(2)
----
--------->
ARR11(3)
<---
<---------
ARR11(3)
-----
<---------
ARR14(2)
<----
----------->
ARR10
<---------
HSFB2a(1)
<------
NtERF2
--------->
HSFB2a(1)
--------->
LBD16
<---------
KAN4(1)
<---------
ANAC46
--------->
KAN4(1)
<---------
LBD16
--------->
ANAC46
--------->
MYB46(3)
<---------
ATHB12
--------->
ZAT6
<-----
<-----------
GT1
<---------
HSFB2a(2)
--------->
ALFIN1
--------->
KAN4(2)
----------->
GT1
<---------
ZAT14
--------->
HSFB2a(2)
--------->
DAG2
<------
ZmHOX2a(1)
====
bZIP_DOF
--------->
ZAT14
--------->
ANAC58
--------->
YAB1
--------->
MYB52(1)
<---------
KAN4(2)
--->
DOF2
--------->
REM1(1)
--------->
ANAC58
<---------
ICU4
---------->
DOF2
<---------
TOE2(3)
gttttgttactacaacaactacagtctcactcagcctcgctacttctgcaaatcatgccggagatattggactaaaggtggaactctaaggaacatcccc
24258700
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AGI:
At5g60200.1
Description:
Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF5.3 (DOF5.3) [Arabidopsis Thaliana] (GB:Q84TE9;GB:Q8LDE1;GB:Q9LSS6); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G45610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21785.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851)
Range:
from: 24258201
to: 24259749
Orientation: Forward
Links:
TAIR
MIPS
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publications
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