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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                <---------AHL20(2)
                                                                                --------->AHL20(2)
                                               <------MYB46(1)                 <---------AHL20(2)
                                               ----------->GT1           --------->YAB1           <-
                                              --------->MYB59           <---------YAB1           <--
                                            --------->CCA1(2)         --------->YAB1             ---
                                            --------->ARR14(1)        <---------ICU4             ---
                                           --------->ARR11(1)        --------->ICU4              <--
                                           <---------ARR14(2)     <---------AHL20(2)             ---
                                           --------->ARR14(2)     --------->AHL20(1)            ----
                                           --------->ARR11(3)     --------->AHL20(2)  --------->ZAT6
   ----------->GT1                ----------->GT1                --------->AHL20(2) <-----------GT1
----YAB1                     --------->AHL20(2)<------MYB83 <---------AHL20(2) --------->AHL20(2)<--
 
attgagtagtaagtttagttgtttttatgagattatatagtaaaaagatttggtaaatgttatataaaaaaaattatgagaattaatttacactagaaaa  24257800
  <---------AHL20(2)
--------AHL20(2)                                                                --------->TOE2(3)
-------AHL20(1)                         --------->YAB1                   <---------AHL20(1)
------>AHL20(2)                        <---------ATHB12               --------->AHL20(2)
------>AHL20(1)                --------->ARR11(3)                    --------->AHL20(2)
-------ARR11(3)                <---------ARR11(3)                    <---------AHL20(2)
------>ARR11(3)               <<<<<<<<<RAP2.2                       --------->AHL20(2)
----->AHL20(2)        --------------->AGL15                   ------->TEIL   <-----------GT1
-------AHL20(2)       <---------------AGL15                <---------YAB1--------->AHL20(1)      ---
 
tatattttaaaacttacttcattttcaaattttagatatcaaatcatacaaaatgttgttttatgaaactaattaatatataaccttgtttgaagtagca  24257900
                                                <------MYB83
                                                ----------->GT1
                                                <------MYB46(1)
                                               <---------TOE2(3)
                                           <---------ICU4
                        --------->CCA1(2)  --------->ATHB12
                       <---------AHL20(1) --------->ICU4
                       <---------AHL20(2) <---------YAB1                          <---------ARR11(3)
                       --------->AHL20(1)--------->TOE2(3)                        --------->ARR11(3)
                    --------->AHL20(2)<-----------GT1              --------->ANAC58
  <-----------GT1--------->TOE2(3) --------->YAB1        <---------ICU4           <---------GLK1(2)<
------>ICU4    <---------ATHB12----------->GT1 --------->MYB59     --------->ANAC58<---------RVE1(1)
 
atttttaacaagtcttcaaacattaatatatgaagagataataacattattaggttatactaatttccacaggctatcaaatgtagattttttgttcgca  24258000
                    <------NtERF2
                   <---------RAP2.3(1)
                   ------>NtERF2
                  <---------RAP2.6(2)         ----------------->AGL1
                  <---------DEAR3(1)      <---------TGA1a
               --------->ANAC46           <---------ANAC55(2)
         --------->YAB1                   --------->ANAC55(2)
        <---------AHL20(2)              <-----------GT1
       <---------AHL20(2)     <---------MYB46(3)
       --------->AHL20(2)     <---------DEAR3(2)
    <---------AHL20(2)<---------DAG2  <-----------HVH21
    --------->AHL20(1)==============================bZIP_DOF
    --------->AHL20(2)<----------DOF2--------->bZIP60(2)                                          --
<---------AHL20(2)<---------RAP2.3(3)--------->ANAC46                                             --
--------->AHL20(2)<---------RAP2.3(2)--------->ANAC58                                             <-
---------YAB1--------->MYB52(1)      --------->ANAC58           <---------YAB1                 -----
 
ttataaattttttaataaacggcggctttatgtctgttccaagtcacgttccgaattggttcacattattcttcttagcattgtttgaaatattaaacta  24258100
                                                                                       <----------DOF2
                                                                                    ---------->ID1
              ----------->RAV1(1)                                                <---------DAG2
              --------->RAP2.6(2)                                                <----------DOF2
             --------->ZAT18<---------ANAC46                                    <---------ANAC58
       <------ZmHOX2a(2)<------------CBF                                <---------GLK1(2)
------->YAB1------>NtERF2   <---------ANAC58  <---------ALFIN1         <---------At4g35610
------->AHL20(2)     ------------>CBF       ----------->RAV1(1)----------->TBP  <---------ANAC58  <-
--------AHL20(2)    ----------->RAV1(1)  ------>ZmHOX2a(1)<---------TOE1(2)<---------ANAC58 <-------
---->YAB1  --------->ANAC46 <---------ANAC58<---------ALFIN1  ------->TEIL <---------ANAC58 <-------
 
ataatatgagatcgaggccacaacaacaattgtgtgtctctctcctcccacattcccatcccatgtatatatacagatgcttggcttttccttttgcttc  24258200
                  --------->WOX13(1)
               --------->ARR14(2)
               <---------ARR14(2)                                                         <-------TEIL
 <---------AHL20(2)                                                                     <---------GLK1(2)
 --------->AHL20(2)  <---------ICU4                                                     <---------ARR14(2)
*TSS <-----------GT1<---------ATHB12           --------->TOE2(3)           --------->ANAC58
---------DOF2 --------->GLK1(1)       --------->ANAC58          --------->YAB1          --------->ARR14(2)
--ANAC58      <---------CCA1(2)       --------->ANAC58      --------->ZAT6 --------->ANAC46  -------
--ANAC58    --------->YAB1        ------>ZmHOX2a(2)<---------CCA1(2)       --------->ANAC58  <------
 
acttttaatttctactcatatccatcattctctctgatctcaagaaataatctcaaatctcttacactcatagtcttcaagcaacttctcagattcagct  24258300
                                                        --------->ARR11(3)
                                                   <---------MYB59
                                                 <---------ARR11(3)
                                                 --------->GLK1(2)
                                         --------->CCA1(2)
                    <-----------RAV1(2)  <------ZmHOX2a(2)
         <---------MYB46(3)             <---------ARR14(2)                                   -------
     --------->ATHB12                   --------->ARR11(3)                                 ---------
    <------ZmHOX2a(2)                   --------->AGP1  <---------ARR11(3)                 ---------
-->At4g35610  --------->REM1(1)         <---------ARR11(3)                                <---------GLK1(2)
---At4g35610<-----------GT1             --------->ARR14(2)            ----------->GT1   <---------TOE2(3)
 
cttatggatcatttgttacaacaccaggtaaactacaattcaagatccacagtatctaacatcttgatgtgttttgttaatttgtctaattaagaatctt  24258400
                                                                                            <-------
                                                                                     ------>MYB83
                     <---------TOE2(3)        --------->ANAC58                       ------>MYB46(1)
                   ---------->DOF2            --------->ANAC58                    --------->ANAC58
               <----------DOF2              ---------->DOF2                       --------->ANAC46--
    <---------AHL20(2) <------ZmHOX2a(1)<---------YAB1               --------->YAB1 --------->ANAC46
-->YAB1    ---------->ID1             <---------ICU4                <---------YAB1--------->ANAC58<-
>GLK1(2)<---------AHL20(2)            --------->YAB1   --------->ANAC58    --------->YAB1  <--------
>ARR11(3) <-----------GT1            --------->ICU4    --------->ANAC58   <-------TEIL <---------ALFIN1
 
gatgtgtttattttttctcttttaaaggatgtttttgggaattataacaaagcaagagaagcaatgggactatcatattcatcaaacccaacaccgttag  24258500
                                                                 --------->TGA1a
                                                                 ===================================
                                                                 <---------TGA1a
                                                                 --------->At4g35610
                                                                 <---------At4g35610
                                                                 ==============================MYC_MYB
                                                      --------->At4g35610
                                                      <---------ZAT2      <-------MYC3
                                                      <---------At4g35610 ------->MYC3
 ------->GAMYB                                     --------->LBD16       <---------O2
<----------ID1               <---------DEAR3(1)   --------->HSFB2a(2)    --------->ANAC46    -------
--------->MYB46(3)        --------->MYB46(3)--------->DEAR3(1)   --------->O2 <---------ANAC58
--MYB52(1)   <---------HSFB2a(1)   <---------bZIP60(2)--------->ZAT2     --------->O2  ------->GAMYB
------->MYB52(1)     ------>ZmHOX2a(1)     <---------ALFIN1      <---------O2 <---------ANAC58
--------DOF5.7(2)  ----------->RAV1(2)   ----------->RAV1(1)   <-----------RAV1(2)    <---------MYB52(2)
---HVH21     --------->HSFB2a(1)----------->HVH21<---------LBD16<---------TOE1(2)     --------->MYB46(3)
 
ataacgaccagaagaaaccttctcctgcaacggctgtgacaaggccacagcctccggagctagctctcaggtgtccacgttgcgactcaacaaacacaaa  24258600
                                                                                                  <-
                                                                                                  --
                                                                                                  <-
                                                                                                 ---
                                                                                                <---
                                                                                                ----
                                                            --------->CCA1(2)                   ----
                                                           --------->ARR11(3)                   <---
                                                           <---------ARR11(3)                  -----
                                                           <---------ARR14(2)                  <----
                                                         ----------->ARR10               <---------HSFB2a(1)
                                                        <------NtERF2                    --------->HSFB2a(1)
                                                       --------->LBD16                   <---------KAN4(1)
                                                      <---------ANAC46                   --------->KAN4(1)
                                                     <---------LBD16                --------->ANAC46
           --------->MYB46(3)                   <---------ATHB12               --------->ZAT6 <-----
   <-----------GT1                        <---------HSFB2a(2)             --------->ALFIN1--------->KAN4(2)
----------->GT1 <---------ZAT14           --------->HSFB2a(2)          --------->DAG2 <------ZmHOX2a(1)
====bZIP_DOF    --------->ZAT14  --------->ANAC58--------->YAB1      --------->MYB52(1) <---------KAN4(2)
--->DOF2--------->REM1(1)        --------->ANAC58<---------ICU4      ---------->DOF2<---------TOE2(3)
 
gttttgttactacaacaactacagtctcactcagcctcgctacttctgcaaatcatgccggagatattggactaaaggtggaactctaaggaacatcccc  24258700
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AGI:  At5g60200.1   
Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF5.3 (DOF5.3) [Arabidopsis Thaliana] (GB:Q84TE9;GB:Q8LDE1;GB:Q9LSS6); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G45610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21785.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851)
Range:  from: 24258201    to: 24259749    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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