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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                  --------->At5g28300
                                                                                  <------NtERF2
                                                                                 <---------DEAR4(2)
                                                                                 <---------MYB46(3)
                                                                                 ----------->GT1
                                                                                 <---------DEAR3(2)
                                                                                 <---------ATERF1(1)
                                                                                --------->ALFIN1
                                                                                <---------ANAC46
                                               <---------ANAC46                 <---------DEAR3(1)
                                      --------->ARR14(2)                  <---------LBD16
                                      <---------ARR14(2)                <---------YAB1
                                    <---------HSFC1(2)     <---------ANAC58    <---------ABI4(1)
                                    <---------HSFB2a(1)    <---------ANAC58  <---------DEAR3(1)    -
                                    <---------DEAR3(2)     <---------AtLEC2<-----------RAV1(1)    --
                                    --------->HSFB2a(1)   <-------TEIL--------->KAN4(1)        -----
                           ------>MYB46(1)  --------->GLK1(2)         <---------KAN4(1)        -----
---------->DOF2            ------>MYB83    <---------ARR14(2)        <---------KAN4(2)        <-----
----->YAB1                <---------ALFIN1 <---------GLK1(2)      <---------TOE2(3)----------->HVH21
------>HVH21   ---------->DOF2      --------->HSFC1(2)<---------AtMYB61--------->KAN4(2)    --------
 
gacaaaagagagttgctatcaagcgaaacccactcgagacggttccgattctgtgttttggtgcatgttgagattattctggggcggtgacaaaccaatt  23710200
      ----------->GT1
     <---------YAB1
     <---------TOE1(3)
     <---------TOE2(3)
-------->DAG2           --------->ZAT6
-------->DOF2         <-----------GT1
---->AHL20(2) ----------->GT1             <---------MYB46(3)
---->YAB1   <---------WOX13(1)           <---------AtMYB61                 ----------->GT1
----ATHB12--------->ATHB12      --------->MYB52(1)     <---------At4g35610--------->DAG2
->WOX13(1)--------->MYB52(2)   ----------->HVH21   <----------DOF2       ---------->DOF2  --------->AHL20(2)
 
aaaaagctatggttaattggttatataactctaggtaacaggcagtggttttatctttagctcgtgaatggagaagaaaagtaagtagctcattttaaaa  23710300
                                                                                 ------>ZmHOX2a(2)
                       --------->TGA2(2)                                        <------ZmHOX2a(2)
                      <-----------TGA1              --------->REM1(2)          <---------ARR14(3)
                      <-----------HVH21            ----------->HVH21           <---------GLK1(2)
                     <---------O2                <---------ANAC46              <---------ARR11(3)
                     --------->ANAC46            <---------ANAC55(2)           --------->ARR11(3)
                     --------->bZIP60(2)--------->LBD16                        --------->ARR14(3)
                     --------->TGA1a    ----------->GT1                        --------->ARR14(2)
                     --------->ANAC58  ----------->GT1  <---------ANAC58       <---------ARR14(2)
                     --------->ANAC58 <---------LBD16   <---------ANAC58      --------->HSFB2a(1) <-
                     --------->O2  ---------->DOF2<-----------HVH21  <----------CDC5      <---------ZAT14
          <---------AtLEC2      --------->AtMYB61>>>>>>>>CAMTA3 --------->MYB52(1) ------>ZmHOX2a(1)
         <-------TEIL=========================bZIP_DOF  ----------->GT1       --------->GLK1(1)   --
        ----------------------->TaNAC69(2) ---------->DOF2----------->HVH21  ----------->ARR10   ---
  ----------->TGA1  <-----------STF1 --------->MYB52(1)<-----------------------TaNAC69(2) --------->ZAT14
 
acatgctgacgatgcatggtttccacgtcatcccaccaaaaaccggaaaaacgcgtgaagcgtgacaaaaccgatgagcgaagatcctctgtgtgaagtc  23710400
                                                      <---------AHL20(2)
                                                 --------->AHL20(2)
                                          ----------->GT1       --------->AHL20(2)
   <---------ALFIN1               <---------YAB1 <---------AHL20(2)---------->DOF2
  <-------TEIL                   <---------AHL20(2)  <---------AHL20(2)                        -----
--------TOE2(3)                  --------->AHL20(2)  --------->AHL20(2)                       ------
------------->AtSPL3            --------->AHL20(2)--------->AHL20(2) <----------ID1         --------
------>MYB52(1)        <----------DOF2  ---------->DOF2   ----------->GT1                >>>>>>>>>TBF1
 
taacgtacaccttcatttccttcagactttacaaattaaaattgaaagtaaaataaataaatagaaataaaaaagacgagagagaagtagaagaagaatg  23710500
                                <---------At4g35610                               ----------->HVH21
                                --------->HSFC1(2)                                <----------ID1
                                <---------HSFC1(2)                   --------->TOE2(3)
                    --------->AHL20(2)                               --------->TOE1(3)
                    <---------------AGL15                            --------------->AGL15
                    --------------->AGL15                           ----------------->AGL2
   <---------AtMYB61=================================================================MADS_MADS
   --------->ALFIN1<---------YAB1                                   ----------------->AGL1
---->ATHB12     <---------AHL20(2)                         <---------YAB1     ---------->DOF2
--->ICU4        --------->AHL20(2)         <---------AHL20(2)    *TSS<---------------AGL15    <-----
->YAB1 <---------MYB46(3)  <---------ZAT6  --------->AHL20(2)<---------AHL20(2) ----------->GT1   >>
 
atggagatggtggttttgttttattatttagagtaagcttcttcatttttttaaaaacttctattattttgaccttaagaagaaagtgacaaggagagga  23710600
                                                          <---------AHL20(1)
                                                          --------->AHL20(2)
                                                          <---------AHL20(2)
                                                          --------->AHL20(1)
                                  --------->AHL20(2)     --------->AHL20(2)
  ----------->GT1           ----------->GT1              <---------ATHB12
 >>>>>>>>>TBF1         <------ZmHOX2a(1)    --------->GLK1(1)                        <---------TOE2(3)
-ZmHOX2a(1)          <---------TOE2(3)     <---------ARR14(2)                      ---------->DOF2
>>>>>>>TBF1 --------->YAB1 >>>>>>>>>TBF1   --------->ARR14(2)          --------------->AtSPL8      -
 
agaagaagaaaaaaaacataatttgaggaagaagaaaaaaaattcggatttgttttttcaataaattgactaattgagtactcgtttaaaggaagtgaag  23710700
                        ---------->DOF2                                    ---------->ID1
                    <---------HSFB2a(2)                           <-----------GT1
             <---------MYB46(3)                                 <----------DOF2
            <---------ZAT6                                     <---------ICU4
            --------->ALFIN1                                 --------->GLK1(2)
            <---------AtMYB61                                --------->ARR11(3)
  <----------DOF2   --------->HSFB2a(2)                      <---------ARR11(3)   --------->ATHB12
 <----------DOF2<---------MYB46(3)          ----------->HVH21<-----------ARR10 <----------DOF2
---------->GT1 <---------AtMYB61      ---------->ID1    ----------->GT1<----------DOF2 --------->ATHB12
 
agcggttttttggtagtggtggtcgagaaaagagagagtttgtctctgtgactcagaggtagaaaatctttactctttgtttctttgatttgattagtca  23710800
                     <---------ARR14(2)                               --------->ATHB12
                     --------->ARR14(2)                              <---------YAB1
          <-------GAMYB                                  <---------AHL20(2)
          --------->At4g35610                            <---------YAB1 <---------WOX13(1)    ------
          <---------At4g35610                    <---------MYB52(1)<---------At4g35610       <------
 
ctaatttagtttcagttgaatccatatatgtcgatttgttttagagtttgcagtttgtttttaattgttttgctgattggaaaatgagttaacaatatga  23710900
                                      <------MYB83
                                      <------MYB46(1)
                                    <---------MYB52(1)
                                 ------>ZmHOX2a(2)
                               <---------ARR14(2)
                               --------->ARR14(2)
                            <---------TOE2(3)
                          <---------ICU4
                         --------->ICU4                            <---------TOE2(3)
                         <---------ATHB51               <------MYB46(1)
                   <---------MYB46(3)<---------AtMYB61  <------MYB83                           <----
                   ----------->GT1<-----------RAV1(1)  <---------AtMYB61                       -----
               --------->DAG2  ------->TEIL            --------->MYB59                       -------
--->ATHB12    ---------->DOF2  <---------AGP1 <---------YAB1       <---------TOE1(3)       <--------
---YAB1<-----------RAV1(1)-------->HAHB4    <---------AHL20(2)    ---------->DOF2 <---------CCA1(2)
 
ttagttttcgatgttgcaaaagtggttaattatggatctgttggtgtttatttttggtttggtttgttttaaagttggaaactttgtatcccaaactaac  23711000
                               <---------ZAT14                                          --------->At4g35610
                           --------->ARR14(2)                                    --------->AHL20(2)
                           <---------ARR14(2)                                    <---------AHL20(2)
--------MYB.PH3(2)--------->TOE2(3)                     --------->ARR11(3)   --------------->AGL15
---->MYB46(3)    --------->At4g35610      <-----------GT1                   <---------YAB1
-->MYB52(1)   ------>ZmHOX2a(1)<---------At4g35610    <---------YAB1      <-----------GT1
-MYB52(2)    --------->TOE2(3) --------->ZAT14 <---------MYB52(1)     ------->TEIL    --------->YAB1
 
aaactcttccttctctccttagcttaatcgtttctgcagtttttatttctgttttgtatgattttgttctatgtatattaccattttaatcagaagaaaa  23711100
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AGI:  At5g58620.1   
Description:  zinc finger (CCCH-type) family protein. similar to CZF1/ZFAR1 [Arabidopsis thaliana] (TAIR:AT2G40140.2); similar to CZF1/ZFAR1, transcription factor [Arabidopsis thaliana] (TAIR:AT2G40140.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78824.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Ankyrin (InterPro:IPR002110)
Range:  from: 23710566    to: 23713448    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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