Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->AHL20(2)               --------->ZAT6                              <---------AHL20(1)             <-----------GT1                              --------->AHL20(1)           <---------AHL20(2)                              <---------AHL20(2)           --------->AHL20(2)                           --------->YAB1              <---------AHL20(2)                          <---------YAB1               --------->AHL20(2)                   <---------YAB1                      <---------AHL20(1)                           <                ----------->TGA1                       --------->AHL20(1)                           -     <---------AtLEC2   --------->YAB1           --------->YAB1<-----------GT1                 ------ -----GT1       ----------->HVH21                --------->TOE2(3)   --------->TOE2(3)  --------->AtMYB61   cacttgtgcaaggagcaaatgacgatttataataaattacaaacaaacttatcttaataaatttatcactaccttgaaggggcattgagaccatagcatg  22005300                                                                                   <---------YAB1                                                                          --------->MYB46(3)                                                                        <-----------GT1        ---------->DOF2                                               <-----------HVH21     ---------      <------ZmHOX2a(1)        ---------->DOF2                --------->ANAC58--------->AtMYB61     - ---------ANAC55(2)      <---------YAB1                       --------->ANAC58<---------ICU4--------- -------->ANAC55(2)      --------->ICU4       ----------->GT1<---------LBD16----------->RAV1(1)   <-- ----->GT1       --------->TOE2(3)        ---------->DOF2 <-----------HVH21<---------ALFIN1 ---------   ttacatgaggaaaagaaaacctttgtactgattaaaagaacacttaaagagttaatccattgtcacggctattgtcaccaccattaccattgccacgcat  22005400                                              <------------ATHB5 >ANAC58                                      --------->YAB1 ----->ZmHOX2a(2)                             <---------ICU4                       --------->CCA1(2) >ANAC58                                     <---------ATHB12               ---------->DOF2 -------ARR11(3) <-----------RAV1(1)         --------->ICU4            --------->DAG2 >ANAC46    >>>>>>>>>>>>>>>>>LFY     --------->ARR14(2)              ---------->DOF2   gatcgtctccatgactccattgttgccattaccacatcgtttccacaatcatggcaaatgcaatatagtggcaaaggtgaaagagatagacagatagtaa  22005500                        --------->AHL20(2)                       --------->AHL20(2)                       <---------AHL20(2)                 <---------ANAC58                                                       --------->AHL20(2)                 <---------ANAC46                    <------MYB46(1)                    <---------AHL20(2)                 <---------ANAC58                    <------MYB83                ----------->GT1                <------NtERF2<-----------GT1        --------->MYB59         <---------REM1(1)       -              <---------RAP2.6(2)               <---------YAB1            <---------At4g35610  ------              <---------DEAR3(1)        <---------ZAT6   <---------YAB1   --------->At4g35610 <------              --------->ALFIN1     --------->YAB1--------->ATHB12       <--------P--------->At5g28300   tgttccgatactaggggtggcttaaataatttttctatcgtaatgttaagatgataggtactattgcatttttggtagatgaagggtaaattatataaga  22005600                            --------------->AGL15                            <---------------AGL15                           <-----------------AGL1                                                <---                           ----------------->AGL2                                                <---                   ------------>CBF                                                             -----           --------->ARR14(2)                                                                 <------           <---------ARR14(2)           --------->ANAC58                                    <--------        <---------TOE2(3) <-----------GT1                                                  <---------YAB1 --------->DOF2<----------DOF2          --------->ANAC58                           --------->ARR11(3) ----->GT1<------ZmHOX2a(1)----------------->AGL1                   --------->YAB1 <---------ARR11(3) ---TOE2(3)<---------GLK1(2)----------------->AGL1             ------------>CBF    *TSS    --------->ICU4   ttaaaagtttgaggattcttttgcaattttcccatattagaaacgaaacatgttctcttctcaggcccaataacattttttgttaaatctttgattatta  22005700                                    --------->YAB1                               --------->AHL20(2)                                    <---------CCA1(2)    <-----------------AGL1   <---------MYB52(1)                                    --------->O2  <-----------GT1           ----------->GT1                                 <---------CCA1(2) ------TOE1(3)              <-------GAMYB                                 ------>ZmHOX2a(2) ------TOE2(3)             ----------->GT1                              <---------ARR11(3) ----->DOF2            --------->ANAC46                       --------->ANAC58     --------->TGA1a ---YAB1               --------->ANAC58                --------->CCA1(2)--------->ARR11(3) -ICU4                 --------->ANAC58    --------->TOE2(3)  --------->ANAC58<---------CCA1(2)   aagttaacccatcttggaatcaaacacgaccgttaaaatcagaaaccttggttttggatatagccagccatggtgatcttatctctcgtctcttgttcct  22005800                                            <---------MYB52(1)                                            --------->At5g28300                                            --------->DOF5.7(2)                                           --------->LBD16                                           <---------DEAR3(2)                                           ----------->GT1                                          <---------ATERF1(2)                                         <------NtERF2                                       --------->ANAC46                   <---------ANAC58                                      --------->MYB46(3)                  <---------ANAC58             ------>NtERF2 --------->LBD16--------->ATERF1(2)        --------->HSFC1(2)             --------->ABI4(1)        <---------LBD16                --------->HSFB2a(1)            --------->DEAR3(1)    <---------At4g35610                <---------HSFB2a(1)           --------->MYB46(3)     --------->At4g35610                <---------HSFC1(2)           --------->DEAR3(2)   --------->REM1(1)        <---------ZAT2 ------>MYB46(1)             <          <---------At5g28300 <----------DOF2            --------->ZAT2 ------>MYB83                <   <---------MYB52(1)    <---------LBD16--------->LBD16  <---------At4g35610                        - --------------------->WRI1------>NtERF2------>NtERF2    --------->At4g35610                        -   tctccgttttctcaccgccgattagtctccggcttcatctcccgccggtaacttctctctgctcccatggaaccttccctgcttcttctacatttcggtc  22005900             <---------ANAC58             <---------ANAC58                                          --------->At4g35610        --------->ATHB12                                               <---------At4g35610        <---------ICU4                                        <---------ZAT2       --------->MYB46(3)                                     --------->ZAT2             <---------MYB52(1)    --------->MYB46(3)        <---------ATHB12     <----------DOF2 --------->TOE2(3)    --------->LBD16    --------->REM1(1)  --------->At4g35610      <-----------GT1  ------>NtERF2         --------->HSFB2a(2) ---------ZAT2      --------->ZAT2 <---------HSFB2a(2)        <---------At4g35610      <---------HSFB2a(2) ---------At4g35610 <---------At4g35610      <----------DOF2  --------->At4g35610     <---------LBD16 -------->ZAT2      --------->At4g35610--------->GLK1(2)     ------->TEIL           --------->ARR14(2) -------->At4g35610 <---------ZAT2 --------->HSFB2a(2)    <---------REM1(1)         <---------ARR14(2)   tcagctacaaccattgcttatcagctgcttaaatcatcgagaacctgctttaactttccgatgtagctgccttagctctccgattgaatccggaagtcaa  22006000          <---------At4g35610         --------->ARR14(2)         <---------ARR14(2)         ------->TEIL         --------->GLK1(2)    <------MYB46(1)    <------MYB83    --------->At4g35610                                                           --------->AtLEC2    ----------->GT1                                                             ---------->DOF2   <---------MYB46(3)                                                         --------->DOF5.7(2)   -   --------->MYB111(2)                                                       <-------GAMYB         <-   --------->MYB55(2)                                                   <---------ANAC46           <-   --------->MYB111(1)                                                  <---------ANAC58         ----   --------->MYB46(2)                                   --------->ARR14(2)   <----------DOF2  <------  <--------P     <---------ARR14(2) <-------TEIL        <---------ARR14(2) --------->ZAT18    <------  <---------MYB55(1)----------->HVH21--------->ATHB12--------->YAB1     <---------ANAC58      <------   attggtaggtgaatctgactatctgacatttctctgcattcatttgttctctgaagcatatttgcaaacacttggtgtgcgttaatgcaaacacttgtgt  22006100    --------->AtLEC2  ---------->DOF2                      --------->GLK1(2) -------->DOF5.7(2)                   <---------GLK1(2)             <---------ANAC46 ------GAMYB                   <----------DOF2                      ----------->GT1 ---------DOF2                <---------ANAC58                 --------->CCA1(2) ----->ZAT18                  <---------ANAC58                --------->ARR11(3)          <---------At4g35610 ---ANAC46        --------->ARR11(3)  <---------ARR14(2)      <---------ARR11(3)>>>>>>>>>TBF1 ---ANAC58        <---------ARR11(3)  --------->ARR14(2)   --------->LBD16--------->HSFB2a(2) ---ANAC58--------->ZAT6 <----------DOF2            <---------MYB52(1)    <---------HSFB2a(2)   gcgttaatgcaaacactaagtatctctcttttgctttgcagaatctctgttttcgttattccgagatattgggtttatagaagaagaaactgagatgatt  22006200  Previous    Next  AGI:  At5g54180.1    Description:  PTAC15 (PLASTID TRANSCRIPTIONALLY ACTIVE15). similar to EMB2219 (EMBRYO DEFECTIVE 2219) [Arabidopsis thaliana] (TAIR:AT2G21710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80174.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 22005683    to: 22007454    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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