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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                     ---------->DOF2
                   ------>ZmHOX2a(1)                                          <---------ICU4
                  --------->TOE1(3)                                          --------->ICU4
                  --------->TOE2(3)                               --------->bZIP60(1)
            <---------AHL20(1)                       <---------ANAC58    --------->At5g28300
            --------->ARR11(3)                       <---------ANAC46   ----------->GT1       <-----
         --------->AHL20(2)                          <---------ANAC58  --------->ZAT6    --------->AHL20(2)
       <----------DOF2                  <---------YAB1           <---------TOE2(3)     <---------ZAT6
 
cattaagtctctttatatattccttaaaactctatattgcattttgattttctagtgcgtataacattgacgttacagtaaaaatttctagttttaatat  21960800
                                                                  --------->YAB1
                                                                 <---------YAB1
                                                              <---------AHL20(2)
                                                           ------->TEIL
                                                      --------->CCA1(2)
                                                     --------->AHL20(1)                 <---------GLK1(1)
                                                     <---------AHL20(2)                 --------->GLK1(1)
   --------->YAB1                                 --------->YAB1<-----------GT1         <---------ZAT14
 --------->ANAC58                    --------->YAB1  <---------AHL20(1)                 --------->ZAT14
 --------->ANAC58    --------->AHL20(2)        --------->YAB1--------->AHL20(2)--------->YAB1
----ICU4  <---------At4g35610       <---------YAB1--------->AHL20(2)<---------YAB1--------->MYB52(1)
 
tcacaagcatggctgctatttcaattcaatataagttttatcatcgtctacaataatatatgaattttatcatcatatagaagaataacagagctctgat  21960900
                                                                --------->DAG2
                                     <----------DOF2           ---------->DOF2
                                  <---------ARR11(3)     <---------AHL20(2)                     <---
                      --------->STY1(2)            <----------DOF2    <-------PIF5              ----
                      <---------At4g35610<-----------GT1--------->AHL20(2)                      ----
                 --------->ZAT6   --------->ARR11(3)   <---------YAB1 ------->PIF5           <------
       --------->DEAR3(1)--------->MYB52(1)--------->ZAT6--------->AHL20(2)            <-----------GT1
 
cacagactcacagccctgtaactctagctaacaaaattatcttttaactctcttctttattaaaaaaaaagcacttgcatagtagcattttaactgatgt  21961000
                                                                                --------->CCA1(2)
                                                                               --------->ARR14(2)
                                                                               <---------ARR11(3)
                                                                               --------->AGP1
                                                                               --------->ARR11(3)
                                                                           ---------->DOF2         -
                                                                        ----------->RAV1(1)       --
                                                                        --------->AtMYB61         --
                                                                      ------>MYB46(1)      <--------
             ----------->RAV1(1)                                     --------->ORA47(1)    ---------
  <----------DOF2       ------>ZmHOX2a(1)                           --------->DEAR3(1)     <--------
 <---------ANAC58    ---------->ID1                                 --------->MYB46(3)     <--------
 <---------ANAC58--------->O2                                    <---------WRKY18(1)       ---------
------ARR14(2)   <---------O2                                 <---------ICU4   <---------ARR14(2) <-
----->ARR14(2) <---------ALFIN1                           <-------TEIL------>MYB83 --------->MYB52(1)
--->TEIL    --------->ANAC46                      --------->ETT(2) -------->ZAP1<------ZmHOX2a(2) <-
---ANAC46   ----------->HVH21<---------AtLEC2     ----------->HVH21--------->DEAR3(2)--------->MYB46(3)
 
atatgctttccctaagcgacacttgtcctcatgcatgaaatcaaattcaatggacgaccgattcatcttgaccgaccacaaagatccaacggctagctgg  21961100
   <-----------RAV1(2)
-------->CCA1(2)
------->ARR11(3)
------->ARR14(2)                                           <---------YAB1
-STY1(2)      <---------AHL20(1)                       <---------DAG2
>ZAT2         <---------AHL20(2)                       <----------DOF2
-At4g35610    --------->AHL20(2)                     <---------ZAT2                                -
-ZAT2  ----------->GT1                               --------->At4g35610                        ----
>At4g35610    --------->AHL20(1)              <-----------RAV1(1)                           --------
--------ARR14(2)  ----------->GT1     ----------->GT1<---------At4g35610     ------->TEIL   <-------
--------ARR11(3)<------------CBF--------->AHL20(2)   <------NtERF2  --------->ZAT6  ------------>CBF
 
agatatacaggtgttaataaattgttatattccaaaaaaatgggttataatgtggcagctttttgatagtaacactgatgtatttcttacaataaacgac  21961200
           --------->ANAC46                  <------NtERF2
           --------->ANAC58                 ------>NtERF2
           --------->ANAC58      <---------At4g35610
          <---------------AGL15  <---------HSFC1(2)
   --------->AHL20(2)            --------->HSFC1(2)
 ----------->GT1                --------->ANAC58
--------->DAG2                <------ZmHOX2a(1)
--------->DOF2           <---------REM1(1) <---------bZIP60(1)                                     -
----->AtMYB61            --------->ALFIN1 --------->RAP2.6(3)<------NtERF2  xxxxxxxxxxxxxxxx>smallRNA(s)
->MYB46(3)--------------->AGL15 --------->ANAC58--------->GLK1(1)      ------->TEIL     <----------DOF2
---ID1  *TSS        --------->MYB52(1)  ----------->HVH21  <---------DEAR3(1)    ------>ZmHOX2a(1)--
 
caaaaagttaatacaagaaatagaaacggtgtaggaagctactatgacggcaattccaaacgtcgtcgatattgaatcttcttcctcttcgctttgtcaa  21961300
                                                                                                   -
                                                                                                   <
                                                             <---------bZIP60(1)            <-------
                                                             <---------O2                  ---------
              <-----------HVH21                              --------->bZIP60(1)         <------ZmHOX2a(1)
       ------->GAMYB                                         --------->O2     --------->ANAC58    <-
    --------->MYB52(1)                                    ----------->HVH21   <---------TOE2(3) <---
  <------NtERF2                                    --------->ANAC58           --------->ANAC58 -----
--------->ANAC58                                   --------->ANAC46        <---------ATHB12---------
--------->ANAC58                <-------TEIL       --------->ANAC58     <---------------AGL15 <-----
-------->RAP2.6(3)      ---------->DOF2          ---------->DOF2     <-----------GT1  <------ZmHOX2a(1)
------->CCA1(2)     <-------GAMYB        <-------TEIL    --------->SPL7 --------------->AGL15 ------
 
gagacggcaacggagaccgtcaccgttgaaagaggctcgtctgattcatcttcaaagccagacgacgtcgttttactaatcaaggaagaggaggatgacg  21961400
      <-----------HVH21
 <---------DOF5.7(2)
-------->DOF5.7(2)
---------MYB52(1)
--TGA2(2)                                                                                        <--
-->TGA1                                   --------->YAB1                                  --------->MYB52(1)
------GAMYB                          <------MYB83                                    ---------->DOF2
---NtERF2                            ----------->GT1                             ----------->HVH21 -
->NtERF2                             <------MYB46(1)                      <------ZmHOX2a(2)    <----
-->HVH21  <---------O2        --------->ANAC46                           --------->ARR11(3)    -----
----bZIP60(1)                 --------->ANAC58              ---------->DOF2------>ZmHOX2a(2) -------
--->bZIP60(1)                 --------->ANAC58      <---------MYB52(1)   <---------ARR11(3) --------
 
ccgttaacttgtcacttggtttttggaaattgcacgagataggtttaataacaccgttcttgagaaagacgtttgagatcgtcgatgacaaagtaacaga  21961500
                              <----------DOF2
                              <---------DAG2
                         ---------->DOF2
                      --------->LBD16
<-------GAMYB        ----------->GT1                                                         <------
-------LBD16         --------->ANAC58                                    ----------------->AG-------
-------->LBD16       <---------ANAC55(2)                        --------->ARR14(2)         ---------
-----ARR14(2)        --------->ANAC58       --------->GLK1(2)   --------->GLK1(2)          ---------
---->ARR14(2)    <---------ALFIN1          <---------GLK1(2)    <---------ARR14(2)   --------->ANAC58
>GAMYB          ----------->HVH21  --------->ATHB12             <-----------ARR10    --------->ANAC58
->MYB46(3)    --------->ATERF1(1) <---------YAB1               <---------GLK1(2)   ---------->DOF2
 
cccggttgtatcatggagcccgacccgtaaaagctttatcatttgggattcttacgagttctcagagaatctacttcccaaatacttcaagcacaagaac  21961600
                            <---------ANAC58
                            --------->ANAC55(1)
                            --------->ANAC55(2)
                            --------->ANAC46
                            <---------ANAC55(2)
                            <---------ANAC58
                            --------->ANAC58
                            --------->ANAC58                                     <----------DOF2
                            <---------ANAC55(1)                               --------->ANAC58
                <---------ZAT2  --------->ANAC58                              --------->ANAC58
                <---------At4g35610                                     <----------DOF2
---ARR11(3)     --------->At4g35610                                    <---------ANAC58
-->ARR11(3)  <---------MYB52(1) --------->ANAC58                   <---------ANAC58
>ANAC58     <-----------HVH21 --------->TGA2(2)       <----------DOF2  <---------ANAC58
>ANAC58     <-----------TGA1<---------ANAC46     <-----------GT1   <---------ANAC58----------->GT1
 
ttctccagttttattcgtcagcttaactcttacgtaagcacagaacaagtttttactctttagctatgtttcttgctttacaagctttgtaaaaactaga  21961700
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AGI:  At5g54070.1   
Description:  AT-HSFA9 (ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A9); DNA binding / transcription factor. Identical to Heat stress transcription factor A-9 (HSFA9) [Arabidopsis Thaliana] (GB:Q9LVW2); similar to ATHSFA2 (Arabidopsis thaliana heat shock transcription factor A2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G26150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65333.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232)
Range:  from: 21961209    to: 21962545    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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