Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->AHL20(2)                                                      <---------AHL20(2)                                                      --------->AHL20(1)      <---------ICU4 -------->YAB1                                        <---------AHL20(1)   --------->ANAC55(2) --------ATHB12                                       --------->AHL20(2)   --------->YAB1 ----->WOX13(1)               --------->DAG2         <---------AHL20(2)    --------->ANAC46   <------ >AGL15                 <---------HSFB2a(2)--------->MYB52(1)    ----------->GT1 --------->YAB1------ -AGL15      <-----------GT1 ---------->DOF2         --------->AHL20(2)   <-------TEIL----------->GT1   aatcatactctatttttactggagttgcagaaaaagggacttacaaaacgatgaattaaatttggacaagtatatatacataattagaaggttatagaat  20068700                 <---------ANAC46                 <---------ANAC58                 <---------ANAC58            <---------RVE1(1)           --------->ARR11(3)          <------ZmHOX2a(1)                                                     --------->ANAC58        <---------TOE2(2)                                                       ----------->GT1        <---------TOE1(2)                                                       --------->ANAC58      --------->TOE1(2)              ----------->HVH21                         --------->DAG2  <-----     <---------ANAC46       --------->TOE2(2)                                 ---------->DOF2 -------     <---------ANAC58       --------->TOE1(2)                       --------->AHL20(2)      <--------     <---------ANAC58     <---------YAB1         --------->ZAT18    <---------AHL20(2)   ----------->GT1 ---GLK1(2)<---------ARR11(3)      --------->ALFIN1  ----------->RAV1(1) ----------->GT1 --------->YAB1 --->GLK1(2)<---------CCA1(1)------>ZmHOX2a(1)---------->DOF2      --------->AHL20(2) --------->YAB1<   ctagttttcgtaggatatttcttgaattatcctacgagtgtgacaactaaatgcacaacaaaacaacaatttaaatgctaaaaagcaaaaatagtaatta  20068800                         <---------ALFIN1                        -------->P     --------------->AGL15     <---------------AGL15    ----------------->AGL1                                    --------->AHL20(2)    <-----------------AGL1                                    --------->AHL20(1)    ----------------->AGL3                                    <---------AHL20(2)    <---------ANAC55(2) ------>MYB83                     <---------AHL20(2)    --------->ANAC55(2)----------->RAV1(1)               --------->AHL20(2)    <-----------------AG------>MYB46(1)             --------->AHL20(2)                           <---   <-----------------------TaNAC69(2)              --------->AHL20(2)                           ----- ------GT1   <------ZmHOX2a(1)                     --------->YAB1                              ------ -->ICU4   <---------ANAC55(2)                 ------>ZmHOX2a(1)  --------->AHL20(2)  ----------->GT1 -ICU4     <---------TOE2(3)       <---------At4g35610--------->YAB1                 --------->DAG2 -----------HVH21     --------->AtMYB61<---------MYB52(1)--------->AHL20(1)         ---------->DOF2   ctggtcacctattaaggaacaacaccaacacctatttagctgttatgtcctaataaaaataaaataaaataaaaacaataaaccaaaaaagtaaaaaata  20068900                                                                                                   <-                                <-------TEIL                                                      ---                              <---------GLK1(2)                                     ----------->GT1<-                              <---------ARR14(2)                            <----------DOF2       <-- ------AHL20(2)               --------->ARR14(2)                           <---------ICU4--------->ICU4 ---->YAB1             <----------DOF2        ------->TEIL   ------------>CBF      <---------TOE2(3) --->AHL20(2)      <----------DOF2<-----------HVH21  <----------DOF2     --------->GLK1(2)        <--   aaaatgtttgactaaaattctctttcttttccgattcgtcattcgatgaatcttcctttcttatacaatttggataatcttttctaatgtaaaaattcga  20069000             --------->TOE2(3)            ----------->GT1                                                         <---------CCA1(2)           <---------TOE2(3)                                                       ------>ZmHOX2a(1)          --------->YAB1                                                        <---------YAB1       --------->YAB1                                                       ------>ZmHOX2a(2)     ---     <-----------TBP                                                      <---------ARR11(3)  <------ <---------AHL20(2)                  --------->TOE1(3)                <-----------GT1<---------ARR11(3) --------CCA1(1)                     <---------MYB59             ==================HOX2a_HOX2a<------ ------>ARR11(3)                     --------->TOE2(3)           ------>ZmHOX2a(1)--------->TOE1(3) --------RVE1(1)                   -------->P                   --------->TOE2(3) --------->TOE2(3) -------ARR11(3)       ----------->TBP                      <----------DOF2 ==============HOX2a_HOX2a -------GLK1(2)        --------->AHL20(2)                <---------ALFIN1 --------->ARR11(3)  <------   gatttttttttataatgttaaatctataaataagagcaacctaaaacgaacaacttctcccactttccttattttcgatcttatccttatcttcttcctt  20069100                                                              <------ZmHOX2a(2)                                                              =================================HOX2a_HOX2a                                                             <---------ARR14(3)                                                             --------->ARR14(2)                                                             <-----------ARR10                                                             --------->ARR11(3)                                                             <---------ARR14(2)                                                         ---------->DOF2                                                    <---------YAB1                                                  --------->YAB1                                                 <---------ATHB12                        --------->ANAC58                                                 <---------YAB1         --------->AHL20(2)                                                 --------->ICU4         <---------AHL20(2)                                            --------->YAB1   --------->ARR14(3)          --------->ANAC46                                            --------->ANAC55(2)------>ZmHOX2a(2)         --------->ANAC58 ------->ID1                                --------->ANAC46 --------->AGP1             ------>ZmHOX2a(1) ---ANAC46                                  --------->ANAC58 <---------ARR11(3)       ------>ZmHOX2a(2) ---ANAC58                                  --------->ANAC58--------->RVE1(1)       <---------ARR11(3) ---ANAC58                                  --------->ANAC55(1)================================HOX2a_HOX2a   gttctatttctcttctaactaatctcttctcttctcttaaaatcaaacgtaatcataaataaagatcttcttgtttaatttctcttgatcctcgcaaaat  20069200                                                                                             --------               <----------DOF2                                                              ---------            --------->GLK1(2)                                                           --------->TOE2(3)   --------->GLK1(2)             --------->GLK1(2)        <<<<<<<<<<<<<<<<<LFY   --------->YAB1     <  <---------GLK1(2)<-----------GT1                     ---------->DOF2          ----------->GT1     <  <---------ARR14(2) <---------ANAC58               <---------YAB1              --------->ICU4      <  --------->ARR14(2) <---------ANAC58    --------->ARR11(3)                <---------YAB1   ---------   cacagattcttgaaattcttttttcttgtcttgaaattcttgagttcttgagttatgaaaagacaatggacagagttatgaaatgataaatctcaaccaa  20069300                                              <---------MYB52(1)                                    - ->MYB46(3)                                   --------->DOF5.7(2)                                  <- >ANAC58 --------->YAB1                      --------->TOE2(3)                                  ----- ---------ANAC46                            --------->ANAC55(2)                                 <---- ---------ANAC58                           <---------TOE2(3)                                 <------- ---------ANAC58                 --------->ATHB12                                           <-------- >ANAC58<---------YAB1   <---------YAB1   <-----------GT1                                   =========   ttccttgtttatcattctatatcagttgtgattcttcattggttttacgttatctcttgaacaaaaaaacatggcaaacgcagagaagacaagttcaggt  20069400                                                            <---------ANAC46                                            <---------ARR14(2)                                            --------->GLK1(2) ---------->RAV1(1)                         <---------ARR11(1) --------ETT(1)             --------->ANAC58--------->ARR14(2) ---->ARR14(2)              --------->ANAC58------->TEIL    <---------ANAC58 -----ARR14(2)          --------->ANAC58   <---------ARR14(1)                                   ----- --TOE1(3)              --------->ANAC46   <---------CCA1(2)<---------ANAC58                   <----- ---RAV1(2)             --------->ANAC58--------->LBD16    <------NtERF2                   --------->ANAC58 ===========RAV ---------->DOF2  <---------YAB1  <---------AtLEC2                          --------->ANAC58   tccgacatagatgagaagaaaagaaaacgcaagttatcaaaccgcgaatctgcaaggaggtcgcgtttgaagaaacagaagttaatggaagacacgattc  20069500    ------>ZmHOX2a(2)   <------ZmHOX2a(2)   <---------GLK1(1)   --------->GLK1(1)  --------->ARR14(3)  --------->ARR11(3)                                                <---------WRKY18(1)  <---------ARR14(3)                                 --------->At5g28300  --------->ARR14(2)                                ----------->GT1----------->HVH21         --------  <---------ARR14(2)                              <---------At4g35610                        <-------  <---------ARR11(3)             <---------ZAT14  <---------ZAT2 <---------ANAC58          --------->LBD16 ---->YAB1                ---------->DOF2         --------->ZAT2 <---------ANAC58        <---------LBD16 --TEIL          <----------ID1  --------->ZAT14  --------->At4g35610          --------->MYB52(1)   atgagatctccagtcttgaacgacgaatcaaagagaacagtgagagatgtcgagctgtaaaacagaggcttgactcggtcgaaacggagaacgcgggtct  20069600  Previous    Next  AGI:  At5g49448.1    Description:  CPuORF4 (Conserved peptide upstream open reading frame 4) Range:  from: 20069055    to: 20069961    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g49450.1    Description:  ATBZIP1 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 1); DNA binding / protein heterodimerization/ transcription factor. similar to GBF6 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11), DNA binding / protein heterodimerization/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G34590.1); similar to bZIP transcription factor bZIP41 [Glycine max] (GB:ABI34673.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 20069055    to: 20069961    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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