Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------AHL20(2)                   <---------AHL20(2)                                        <---------GLK1(2)                  <---------AHL20(1)                                       --------->AHL20(1)                  --------->AHL20(2)                                       <---------ARR11(3)                  <---------AHL20(2)                                       --------->ARR11(3)            --------->TOE2(3)                                   ------>ZmHOX2a(1)                  <-            --------->TOE1(3)                   <----------DOF2--------->TOE2(3)                   <-   aaaacttagacaaaccctaattttttttatatttttgtcatgagcgttttctttgaatattgtctccttaatccatatatattctcatgaattctcagat  19048400                                                                                             <-------                                                                                             <-------                                                                                             <-------             <---------AHL20(2)                                                              <-------           <---------AHL20(2)                                                                <-------          <---------AHL20(1)                            <---------ARR11(3)                   --------          --------->AHL20(1)                 --------->ARR11(3)                           <---------MYB52(1)       --------->AHL20(2)                    <---------AHL20(1)                <---------AHL20(2)     <----------DOF2                         --------->AHL20(1)      <---------ATHB12     --------->ARR14(2) --------ANAC58  <---------YAB1             <---------AHL20(2)       --------->ICU4 <-----------GT1<- --------ANAC58  <---------AHL20(2)   --------->TOE2(3) --------->ARR11(3)  ------->TEIL  <---------ARR14(2)   agtgtgtctttatatattttttattagttggacctgtttttcttaaatattttgaaaagatttcatgagcaataaatgtatttttatcaccagttacgtt  19048500                  <---------ARR11(3)                  <---------AHL20(1)                  --------->AHL20(1)       <---------AHL20(2)                       <---------ANAC58       --------->AHL20(2)                       <---------ANAC58       <---------AHL20(1)                  --------->At4g35610      --------->AHL20(2)   ------------>CBF<---------At4g35610 --ANAC58         --------->ARR11(3)       --------->ZAT2 --ANAC55(1)    --------->AHL20(1)     <------ZmHOX2a(2)      <---------AHL20(2) --ANAC58       <---------AHL20(2)    <---------ARR14(2)     <---------AHL20(2) --ANAC46  --------->AHL20(2)         --------->ARR14(2)     --------->AHL20(2) --ANAC55(2) --------->AHL20(2)       --------->AGP1    <---------MYB52(1) ->ANAC55(2)<---------AHL20(2)     --------->DEAR3(2)  ----------->GT1          <----------DOF2<----- --------ANAC46 <---------AHL20(1)------->TEIL<-----------HVH21         <----------DOF2 ------>ZmHOX2a(1)   tttgtgtattaaatttaaaatattttctgaacaatgaaccgatctagctgtcgtctctggtaattaaatcgtttctttcatgctttgctcctctcatttt  19048600                                           --------->ARR11(3)                                 --------->ARR11(3)                                <---------ICU4                 --------->AHL20(2)        <---------AHL20(1)                    ------->TEIL      <---------YAB1             <---------ARR11(3)                        <-----------RAV1(1)    <--    --------->YAB1   ------------>CBF      <---------ARR11(3)       --------->GLK1(2) <-----------GT1   <---------YAB1<---------AHL20(2)        --------->AHL20(1)      <---------GLK1(2)<----------DOF2 ----AHL20(2)   --------->AHL20(2)<---------GLK1(1)         --------->AtLEC2<-------GAMYB         ---   tttttatgataaatgagattaaattcaattttcaagatttcagaaaatatttcttcatttccatgcacagattccttctgttgaatctttacttcttcaa  19048700                           <----------DOF2                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)         --------->ARR11(3)                        --------->AGP1             <---------ARR11(3)                        --------->ARR11(3)        <---------CCA1(2)                        <---------ARR11(3)      --------->AHL20(2)             --------->TOE2(3)          <------MYB83             --------->TOE1(3)    <---------YAB1<---------AHL20(2) -------ARR11(3)       --------->GLK1(1)<------MYB46(1)             <<<<<<<<<<<<<<<<<LFY ------>ARR11(3)      ----------->ARR10--------->MYB59          --------->ICU4   ----------->GT1   --   gatttcaaaataaaaccctaaactgagatctttgttttcattaggtttttttaaatcttccaagtgatgttgacaatgggagaaggtaatgtgatgactt  19048800                              --------->RAP2.6(2)                              --------->DEAR3(1)                             --------->ATERF1(1)                            --------->At4g35610                          --------->ATERF1(1)                          --------->MYB46(3)                         --------->ZAT2                       <-----------RAV1(2)                       <------NtERF2                      --------->LBD16                      <------NtERF2                      --------->At4g35610                      ------>NtERF2                      <---------At4g35610                     --------->RRTF1(2)                     --------->RAP2.3(2)                     ----------->RAV1(1)                    <------NtERF2                    --------->ATERF1(1)                    --------->RAP2.3(1)                    --------->RRTF1(1)                   ------>NtERF2                   --------->ABI4(1)                   <---------ATERF1(1)                  --------->RAP2.3(2)                  --------->ATERF1(2)                  <---------DEAR3(1)                  --------->ANAC46                  --------->DEAR3(1)                  --------->RAP2.3(3)                  <---------ATERF1(2)                 --------->ORA47(2)                 --------->RAP2.3(1)                 --------->ERF1<---------RAP2.6(3)                 --------->DEAR4(2)                 --------->ATERF1(1)               --------->KAN4(1)                <---------RAP2.3(1)                --------->HSFB2a(1)            <---------ANAC58<---------At4g35610    <---------HSFB2a(1)            <---------ANAC58<---------ATERF1(1)    <---------KAN4(1)        --------->GLK1(1)--------->At4g35610      <---------KAN4(2)       --------->ARR14(2)<---------ZAT2       --------->HSFB2a(2)       <---------GLK1(2)----------->RAV1(1)   <---------HSFB2a(2)       <---------ARR14(2)<---------At4g35610  --------->LBD16                 <---------CCA1(2)  ----------->RAV1(1)--------->DEAR3(1)      <---------LBD16  --------->TOE2(3)  --------->MYB52(1)--------->RAP2.6(1)     <---------LBD16   --------->TOE1(3)        <---------At4g35610 ------->ANAC46 <---------ATERF1(1)   <<<<<<<<<TBF1--------->MYB46(3)     --------->AHL20(2)   <-----   caaacaacagatttgcttcgccgccgcagcagccgtcttcttcttctccgggaacaatccaaaaccctaatttcaatttcatacctttcaactcatattc  19048900                   <----------DOF2               ---------->ID1             <---------MYB46(3)                                                                    <-             --------->MYB52(2)                                                                    <-           <---------MYB52(1)                                                                    <---          <---------MYB52(1)                                         <---------YAB1   <---------ARR11(3)         --------->LBD16                                          <---------------AGL15         <----        --------->LBD16                                           <---------YAB1      --------->ARR11(3) --TEIL<---------LBD16                     --------->TOE2(3) <----------DOF2  --------->ICU4    <----   atccattatcccggtttgttcctttttaaaactttcaaacatttatctcaaatccctctctctcttttcttattcttgaaatttttaaaatctttcattt  19049000                                                                  --------->ATHB12                                                                 <---------YAB1                                                               --------->YAB1                                                              --------->ICU4                                                            --------->YAB1                                                           --------->ICU4 ---------DOF2              <---------HSFB2a(2)            <---------YAB1                    -------- --------DAG2               <---------HSFC1(1)           --------->YAB1                      -------- ---------------------ANAC81--------->HSFC1(1)          <---------YAB1                      --------- -------GT1                 --------->HSFB2a(2)   <---------YAB1 --------->ICU4         <------ZmHOX2a(1) -----AHL20(2)      <------ZmHOX2a(2)          --------->ICU4 <---------YAB1    --------->ZAT6      -   acttttttttttttggttttggatcattttctagaaggaagagcatgggatgatgagtatgatgatgatgatgggagatggaacagtagaggaaatgatg  19049100                 <---------PCF2                 <-----------HVH21                <------MYB83                <------MYB46(1)               <---------MYB46(3)               --------->MYB55(2)              --------->ALFIN1              <--------P             <---------MYB52(1)            <-------GAMYB            --------->ALFIN1            <------NtERF2           --------->MYB55(2)           <---------MYB46(3)           ------>NtERF2          <---------DEAR3(1)          <---------ANAC46         <---------LBD16         --------->ATERF1(1)        <---------ORA47(2)        <---------DEAR3(2)        <---------RAP2.3(1)                       --------->CCA1(2)        <---------ATERF1(1)                       <------ZmHOX2a(2)       <---------DEAR3(1)                --------->ANAC58       <---------DREB2C(2)               --------->ANAC58     --------->ARR14(2)             <---------ZAT18                           --------->WOX13(1)     <---------ARR14(2)             --------->ZAT18                       --------->bZIP60(1)     <-----------HVH21         <---------MYB52(1)--------->ARR14(2)       <---------bZIP60(1) ->ATHB12<------NtERF2       --------->MYB59     <---------ARR14(2) --------->GLK1(2) >HAHB4<---------DEAR4(1)    --------->MYB111(1) --------->ARR11(3) ------->TEIL   --------->At4g35610 >ICU4<---------ABI4(1)     <-----------RAV1(2)  <---------ARR11(3) --------->ARR14(2)   ----------->TGA1 -------->MYB52(1)        <-----------HVH21--------->YAB1           <---------ARR14(2)<-------TEIL --   gaaaacgggtcggcgggtgggtcattcgggtcaggtagtgaacaagcagaagatccaaagtttggaaacgaatctgatgtcaatgagcttcatgacgatg  19049200                                                       --------->ANAC58                                                       --------->ANAC46                                                       --------->ANAC58                                                   <------ZmHOX2a(2)          --------->LBD16                          --------->CCA1(2)          ------>NtERF2                           --------->AGP1  <---------ANAC58          ---------        <---------LBD16                           <---------ARR14(2)             <---------MYB52(1)       ------>ZmHOX2a(1)                          --------->ARR14(2)             --------->ICU4   ------->GAMYB            <---------YAB1       --------->At4g35610 <---------TOE1(2)      <--------   --------->AtMYB61     --------->DOF5.7(2)     <---------At4g35610 <---------TOE2(2)<-----------GT1 -------->P             --------->TOE1(3)    <-----------HVH21    <---------ANAC46--------->ATHB51 ------->MYB46(3)       --------->TOE2(3)   --------->YAB1        <---------ANAC58--------->AHL20(2)   aacaacctcctccggctaagaagaaacgttatcacagacacactaatcgtcagatccaagaaatggaagcgtatgtttttgccattattttcagtatatg  19049300  Previous    Next  AGI:  At5g46880.1    Description:  HB-7 (homeobox-7); DNA binding / transcription factor. similar to homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G17710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60291.1); similar to homeodomain protein GhHOX2 [Gossypium hirsutum] (GB:AAM97322.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63344.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Lipid-binding START (InterPro:IPR002913); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro Range:  from: 19048767    to: 19052615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version