Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ------>MYB46(1)                          ------>MYB83                        <---------MYB59                     <---------ICU4                  --------->ANAC46                         --------->AHL20(2)                   -----            <---------ANAC58                               <---------YAB1                       -----            <---------ANAC46     --------->YAB1            <---------AHL20(2)   <---------AHL20(2)            <---------ANAC58    <---------ATHB12         --------->CCA1(2)      --------->AHL20(2)      <------ZmHOX2a(1) --------->AtMYB61          --------->MYB52(1)           <---------AHL20(1) ----ARR14(2)   <---------HSFB2a(2)            --------->ANAC58         <-----------GT1         ----- --->ARR14(2)   --------->HSFB2a(2)            --------->ANAC58<-----------GT1 --------->AHL20(2)   <   ccgatttaggagttgcttctacaaaaccaaaccaataacaaatgtcactaagcaaacagatataattacatttgtaacctattaaatttgaagttatcaa  18499500                                               --------->MYB52(1)                                               ------>MYB83                                               ------>MYB46(1)                                             <---------MYB59                                             ------->GAMYB                                             --------->AtMYB61                                            --------->MYB46(3)    --------->YAB1                                           -------->P        --------->LBD16                                           ------>MYB46(1) <---------LBD16 ---->ANAC46                               ------>MYB83 --------->ZAT18 ---->ANAC58                             ------->GAMYB  --------->ZAT14           <---------MYB52(1)- ---->ANAC58           --------->ATHB12 --------->MYB46(3)------->TEIL      <---------ARR14(2)   ---- -------TEIL--------->GLK1(2)         <-----------GT1   <---------ZAT14----------->GT1--------->TOE2(3)   gctacatagagaagaatcaattgaatcactggcattaacttaaccaaccaaaccgaagtgaaccggaatcataatgtgaaaccggttatctcaattgaag  18499600                                                                             ---------->DOF2                                      <-------TEIL                   --------->LBD16                                     --------->CCA1(2)             <---------LBD16  <---------ARR14(2)       ----------->GT1<---------TOE2(3)                           ------->TEIL--------->DAG2   ---------->DOF2   --------->YAB1 --------->ARR14(2)   <---------LBD16  --------->YAB1 -------->YAB1    <----------DOF2   <---------ARR14(2) <-----------GT1   --------->ICU4         <---- ----->YAB1---------->DOF2----------->GT1   --------->At4g35610 <---------ZAT14----------->GT1-------   aataagaaagagtaaaagagctataatgttgttacacagatacatcaactgtagatttaaccggactgaaccggaattataaagtgaaaccggttatcac  18499700                                                             --------->ANAC46                                                            <---------------------WRI1                                        --------->DEAR3(1)<---------DEAR3(1)                                       <------NtERF2      --------->DEAR3(1)                                      ------>NtERF2     <---------ATERF1(1)                                     <---------ALFIN1   <-----------HVH21                                    <---------ABI4(2)   ------>NtERF2                                    --------->ERF1     <---------DEAR3(1)                                    --------->ATERF1(1)<---------ANAC46                                   ------>NtERF2      <------NtERF2                                   <---------ATERF1(1)--------->ATERF1(1)        <---------At4g35610                                  --------->DEAR3(1) ------>NtERF2   <------ZmHOX2a(2)   <---------At4g35610                                  --------->ANAC46   <---------RAP2.3(1)         --------->At4g35610                                 <---------At4g35610 <---------ATERF1(1)       ------>ZmHOX2a(2)                                 <------NtERF2      --------->DEAR3(1)        <------ZmHOX2a(2)                      --------->At4g35610          --------->ATERF1(1)       <---------ARR11(3)                      <---------At4g35610  --------->ZAT2--------->ATERF1(1) --------->ARR14(2)                    <------ZmHOX2a(1)--------->DEAR3(1)--------->DEAR3(1)    <---------ARR14(2)   <--              ---------->DOF2<-----------HVH21   ----------->HVH21   --------->ICU4      --------->At4g35610 -----YAB1   <------ZmHOX2a(1)   --------->At4g35610<---------DEAR3(1)       --------->ARR11(3)   <-- -->YAB1  <------ZmHOX2a(1) <---------ZAT6 <---------ZAT2<------NtERF2--------->YAB1     ----------->RAV1(2)   aattgaagaagaggaggaaagaggagcttactgtcagcgccaccgagcttagcgacggcgtcgacgaagcgatcatgaagatcggctgtccatctgagcc  18499800                   --------->YAB1                                                                   <                   <---------ICU4                                                                 <--                  <---------YAB1          --------->TOE2(3)                                       <--         ------>ZmHOX2a(2)          --------->YAB1             <----------DOF2                    <--        --------->GLK1(1)          <---------TOE2(3)      <-----------GT1                        <---        <---------GLK1(1)   --------->LBD16            --------->ARR14(2)              --------->YAB1        <------ZmHOX2a(2)   ------>NtERF2 <---------MYB59<-------TEIL  <---------AHL20(2)    --------       --------->ARR11(3)  --------->ANAC46     --------->TOE2(2)      --------->AHL20(2)    <-------       <---------ARR11(3) <---------LBD16 --------->TOE1(3)  <---------DAG2       <------ZmHOX2a(2)-- -------TOE1(2)   --------->ICU4   <---------YAB1   --------->LBD16   --------->AHL20(2)    <-------- -------TOE2(2) --------->YAB1  --------->ICU4  --------->TOE1(2)     *TSS  <-----------GT1 <--------   taggtttgggatctctagtcatcataactccgccattatcgtaacctaaacctccgagattcactctttccatttaattttccgatcaaacaaaataatg  18499900 ------NtERF2 -------ANAC58                                                                 <---------ARR14(2) -------ANAC46                                                                 --------->ARR14(2) -------ANAC58                                                              ----------->GT1 ------LBD16                                                            <------ZmHOX2a(1) ->MYB52(1)                                                       ---------->DOF2 --ICU4                                      =========================HOX2a_HOX2a           <-------- ------->LBD16                               ------>ZmHOX2a(1) ------>ZmHOX2a(2)         ---------->DOF2 -AHL20(2)              --------->AHL20(2)<-----------GT1      ================HOX2a_HOX2a ---------- -ATHB51              ------->TEIL       <-----------GT1   ----------->HVH21<---------ANAC46---------   gcgggaaactcagtcggaagaatgaatcaaataacttcgaaattttcctcttctcaaggatgtgatcggaaagaggaagcgtaaactcaaaaaaaggaaa  18500000                                                                                                =====                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               <-----                                                                               ---------->DOF2------>NtERF2                            ---------->DOF2                                    ======================   --------->WOX13(1)    --------->ETT(1)                        <---------ANAC58            <------- --ID1       --------->ANAC58       --------->ALFIN1             <---------ANAC58    --------->ARR11(3) ->GT1       --------->ANAC58    --------->DAG2      <---------TOE2(3)     <---------TOE2(3) -------- -->GT1      --------->ANAC46   ---------->DOF2     ---------->DOF2   --------->ATHB12       --------   aatggcaatcgaactacgaaatattggtcggaaagaaagtggaagaaattttgttaaagatgggaatgcgagtgattagggtaaagagataatcggcgac  18500100      ----------->GT1  <------ZmHOX2a(1) ==========================bZIP_DOF                                   <---------ARR11(3) -----O2                                                              --------->ARR11(3) -----TGA1a                                                           --------->GLK1(2) ---->TGA1a                                               --------------->AGL15 ---->O2                                                  <----------DOF2 -NtERF2                         --------->ATHB12         <---------DAG2 =====bZIP_DOF               --------->ATHB12    <------ZmHOX2a(2)<------ZmHOX2a(1) --DEAR3(1)                 --------->ICU4     <---------GLK1(1)<---------TOE2(3) --->HVH21                  <---------YAB1---------->DOF2 <---------------AGL15                    -- ->DEAR3(1)     ---------->DOF2<---------WOX13(1)========================HOX2a_HOX2a ---------->DOF2-   gagaggacgagataaatagaaagaagtgtgatgattgatggagaaaaagagatcagaaaactttttgaggaaaatctcagagagagagaaagggaactta  18500200                                                                                               <-----                     <---------YAB1                                                         ---------                     --------->ICU4                                                       --------->AHL20(2)                  --------->ICU4                                                          <---------AHL20(2)                  <---------YAB1                                                          --------->AHL20(1)                --------->YAB1                                                            <---------AHL20(1)           --------->At5g28300                                            <---------MYB52(1)---------         <---------ANAC46                          <---------ANAC58      <-------GAMYB   --------->YAB1         <---------DEAR3(1)                        <---------ANAC58     ----------->GT1 <---------YAB1         <------NtERF2                        --------->ICU4    <---------WRKY12      <--------HAHB4      --------->ATERF1(1)                ----------->HVH21    --------->TOE1(3)       --------->YAB1      <------NtERF2--------->YAB1      ----------->GT1        <-----------TGA1       <---------YAB1     <-----------HVH21                --------->ALFIN1     --------->MYB52(1)<---------YAB1<---------YAB1 -------->DOF2 <---------YAB1   <------ZmHOX2a(1)<---------YAB1--------->DOF5.7(2) <---------ZAT6 -------->DAG2 --------->ICU4<------ZmHOX2a(1)<---------YAB1  --------->TOE2(3)  ----------->GT1   aaaaagtcgtcgcggtgatgatgatgatggaggaggagaagtggtgacattattcgtgacttaacgtcaaccttcggttaatatagtattattataatat  18500300                       --------->ZAT6                                                 ---------->DOF2                     ----------->RAV1(1)                                           --------->YAB1   -                   ------>ZmHOX2a(2)                                            --------->YAB1      <                  <------ZmHOX2a(2)                                            <---------YAB1       <                 ------->TEIL                                                --------->YAB1       <--                 --------->ARR14(2)                                         <---------YAB1     ------                 <---------ARR14(2)                                       --------->YAB1       ------ ----AHL20(1) <---------TOE2(3)                                         --------->AHL20(1)--------->AHL20(2) >AHL20(2) <---------ATHB51 ---------->DOF2                       ----------->GT1  --------->AHL20(2) >YAB1 <-----------------AGL3         --------->AHL20(2)  <-----------GT1<---------YAB1 ----------->GT1   atgtataatacaaattatggatccaacactaaaagtttgtttatatacaaaaacaaattgtatccatatcgaaatattatgataataaaaaagaaaatag  18500400  Previous    Next  AGI:  At5g45580.1    Description:  transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G24120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50003.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 18498319    to: 18499870    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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