Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          ------>ZmHOX2a(2)                                        =============HOX2a_HOX2a                                       --------->GLK1(1)                                       <---------GLK1(1)                                      --------->ARR11(3)                                      <---------ARR11(3)                                      <---------AGP1                   <---------At4g35610                              <---------ZAT2                    <---------ANAC46          --------->ANAC58    --------->ZAT2                    <---------ANAC58          --------->ANAC58    <---------At4g35610         <---------ANAC46 ------>ARR14(2)              --------->At4g35610         <---------ANAC58 ------>AGP1   --------->GLK1(2)      ------->TEIL        <---------ANAC58 >P     ---------->DOF2   --------->ANAC46    ------>ZmHOX2a(1) <---------ANAC58<----------DOF2   gttctacttctaaagccattctgtctcttcgcagctcatggatctctccttctagcgactgcgtttgcgtttgagatgatgtctttcttctcttgatgtt  17643200                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                      --------->AHL20(2)                                                                                    --------->TOE2(3)                                                <---------CCA1(2)                 <------ZmHOX2a(2)                                         --------->ARR14(2)                      <---------ARR11(3)     --------->At4g35610                 <---------ARR14(2) --------->WOX13(1)   --------->ARR11(3)   cttaagaagatgcctctctcccttcagaaaatgctcatttgcaaattcccatctctctgtatcaatcttcttaaacccctacagatcattaaacaaagat  17643300                                                                                         -------->ATHB1              <------ZmHOX2a(2)                                                          --------->ATHB12             --------->ARR11(3)                     ------->TEIL                         <---------ICU4         --------->YAB1                             <-------TEIL                         --------->ATHB51       <---------TOE2(3)                         <---------ANAC58                       <---------YAB1     <---------AHL20(2)                          <---------ANAC58                       --------->ICU4    <---------YAB1                               <---------ANAC46<---------At4g35610    <---------AHL20(2) -------AHL20(2)                                 --------->ANAC55(2)          --------->ZAT2 ------>AHL20(2)          --------->ANAC58       <---------ANAC55(2)          <---------ZAT2 ----->AHL20(2)           --------->ANAC58       <---------ANAC55(1)       ---------->DOF2    <------ ----ARR11(3)<---------ARR11(3)        ---------->DOF2           --------->ZAT2  ----------->GT1   -- --->ARR11(3)------------------------>ANAC81    --------->MYB59  --------->At4g35610    <---------ATHB51   ttaatttttaatgaagatcaaaataaccaagacaaaaactcaaaagtagttacgtacataagtattgagctgtctaacaaagctggagaaattattgtgc  17643400                                                                                                  ---                                                          <---------MYB46(3)           <---------ANAC58                                                       <-----------RAV1(1)        <-----------RAV1(1)                                                     <---------At4g35610     ------->TEIL         <--             --------->ANAC58                       ------->TEIL          --------->AtLEC2   <-------             ----------->GT1                      ---------->DOF2         --------->ANAC46   <------- ---YAB1     --------->ANAC58                    <---------ATHB12   --------->At4g35610<---------ANAC46 -------->DOF2<------NtERF2---------->DOF2   <---------ATHB12       <---------At4g35610<---------ANAC58   ttaaagcatctagggaggcaaattagggcaaaagtctctggttcccaaacaatgaagctgttgttgtctctgctccatgaaactatgttgtttgtgcttg  17643500                                           <---------ANAC58                                          <------NtERF2                                        <---------DEAR3(1)                                      <------MYB83                                      --------->MYB52(2)                                      <------MYB46(1)                                      <---------MYB46(3)                                     <---------MYB46(3)                                     <---------AtMYB61  ------>ZmHOX2a(1)                  <---------DEAR3(1) ------>ARR14(2)                    <---------MYB52(1)                          <---------YAB1 -------ARR14(2)           --------->ANAC58<---------ANAC46                <------MYB83 --ANAC58                  --------->ANAC58<---------ANAC58                ----------->GT1 --ANAC58<-----------RAV1(1) ---------->DOF2     <----------DOF2           <------MYB46(1)   aatcctccactatgttgtatgttttcgtcaagaaagccgttggtggcgtttctttgagaccctctaatggaattggaaggttataatccattttgtgaac  17643600                          --------->YAB1                         <---------AHL20(2)                    <----------DOF2                    <---------DAG2                                                 <----------DOF2           <---------AHL20(2)    ---------->DOF2                        <---------ANAC58         --------->AHL20(2)  --------->AHL20(2)                         <---------ANAC58         <---------AHL20(2)  --------->YAB1                --------->ICU4     <------ZmHOX2a(1)       ----------->TBP  <---------AHL20(2)                 <---------YAB1   <---------TOE2(3)      <-    --------->TOE2(3)   --------->AHL20(2) <------ZmHOX2a(1)     --------->At4g35610     <---------At4g35610   aaaaaacctatataaatttgagcttttttaataaaaaaagagagaggagagaatagttgtgatgaatagctgaagcttgaggatgcttttatgctgtcta  17643700                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                             --------                                          <---------ANAC58                                   <-------               <---------YAB1             <---------ANAC58                 <---------------------WRI1              --------->AHL20(1)          <---------ANAC46                <----------DOF2   <--------              <---------AHL20(1)     <----------DOF2                    <---------YAB1---------->DOF2             <---------------AGL15  <---------ANAC58           <---------AHL20(2) --------->ZAT18 ---            =========================================================================================            <-----------------AGL3  <---------ANAC58           --------->ATHB12<---------ANAC46   <-- --------AHL20(2)               <------------CBF              --------->AHL20(2)  <---------ETT(2)<--   tatttttggggtttaatatttttggatagaaatgtattgcttttgagtgttttggataagtctatttattagttatctttgatgtggacaaagccgattt  17643800 ----------->TBP <---------YAB1    --------->YAB1 --------------AGL15 ------------->AGL15                                                                                < -------------->AGL2                                                                                - ---------------AGL1                                                                            ----- ---------------AGL2                                                                            <---- ->ARR14(2)       <---------YAB1                                                               <----- --ARR14(2)      <---------ARR11(3)                                                            ------ -RAP2.6(3)      --------->ARR11(3) <------------CBF                                  --------->ARR11(3) -------------->AGL3              <-------TEIL                                        --------->GLK1(2) ==============MADS_MADS <-----------HVH21                   <----------DOF2------->TEIL       ------ ---------------AG<------ZmHOX2a(2)--------->ATHB12<----------DOF2       <---------YAB1        <----- ---------------AGL3    <---------ZAT6     <---------At4g35610    ---------->ID1      <---------ARR11(3)   gctataaatggaaatgagagatcatagtgtcatacattcattggaagatgctacttttgtgttcttttgtcttctatgaatatcagaaaatctaaaattt  17643900           <---------AHL20(2)          --------->AHL20(2)          <---------AHL20(2)         <---------YAB1       --------->YAB1      <---------YAB1    --------->YAB1    <---------ICU4    <--------HAHB4   <---------YAB1                                                                               <----   <---------ATHB12                                                                        <---------ANAC46   --------->ICU4                                                                          <---------ANAC58 --------->WOX13(1)                                                                        <---------ANAC58 ---------AHL20(2)                                                                    --------->ANAC55(2) -------->AHL20(2)                                                                    <---------ANAC55(2) ---->AHL20(2)                              <-------TEIL       ------->MYC3          <-------TEIL --- -----AHL20(2)                           <---------HSFC1(2)    <-------MYC3         --------->ARR14(1) ----AHL20(2)                            --------->HSFC1(2)   <---------O2          --------->CCA1(2) --->AHL20(2)                       --------->YAB1           <<<<<<<<<<ABI5        <---------ARR14(2) --->AHL20(1)                    --------->TOE2(3)           <<<<<<<<<<BZIP12      --------->ARR14(2) ----AHL20(1)                 ----------->RAV1(1)        ----------->HVH21         --------->ARR11(1)   aattaatcattataaatttagtgactatgctccaacatttataagcttcgttttcgcccatgacacgttgtagtgaatgcatagagatacgtttcgtggt  17644000                                                           <---------ZAT14                 <---------WOX13(1)                                                           --------->ZAT14               --------->ATHB12                                                           --------->REM1(2)            <---------AHL20(2)                                                      --------->CCA1(2)                 <---------YAB1                              <----------DOF2        --------->ARR11(3)       ------>ZmHOX2a(1)                       --------->ATHB12      <----------DOF2                  ======================= -----ANAC46          --------->ICU4    --------->TCP20   <---------ANAC46<---------ARR14(2)     ---- ------>MYB52(2)   --------->ICU4 <---------AtMYB61  <---------ARR11(3)   --------->ARR14(2)    -----   ttgtttgtttattctgaagtcagaatgatgggatttttggtggaaccctttgaaagatttgtgtagagaacaagagtatcctttgaaaatttgattgatc  17644100  Previous    Next  AGI:  At5g43840.1    Description:  AT-HSFA6A (Arabidopsis thaliana heat shock transcription factor A6A); DNA binding / transcription factor. Identical to Heat stress transcription factor A-6a (HSFA6A) [Arabidopsis Thaliana] (GB:Q1PDN3;GB:Q9FG80); similar to AT-HSFA6B (Arabidopsis thaliana heat shock transcription factor A6B), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G22830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71226.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232) Range:  from: 17642664    to: 17643591    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version