Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ------>ZmHOX2a(2)              <------ZmHOX2a(2)                                        <---------TOE2(2)              --------->CCA1(2)                                        <---------TOE1(2)             --------->ARR11(3)                                        <---------TOE2(3)             --------->ARR14(2)                                     ------>ZmHOX2a(2)             <---------AGP1                                        <------ZmHOX2a(2)    --------->ANAC46                                              <---------ARR11(3)         <-------TEIL    --------->ANAC58                                              --------->AGP1          --------->ZAT2    --------->ANAC58     --------->ARR11(3)                       --------->ARR11(3)      <---------ZAT2 -------->ANAC58   --------->GLK1(1)                             --------->GLK1(1)        <---------At4g35610 -------->ANAC58   <---------GLK1(1)      <---------WRKY38(1)    <---------GLK1(1)        --------->At4g35610 ---->ANAC58 <---------ARR11(3)           <---------WRKY12 --------->MYB52(1)          <---------At4g35610 ---->ANAC58 <---------ARR14(2)--------->ARR14(2)       --------->TOE2(3)       <---------TOE1(3) ---->ANAC46 --------->AGP1------>ZmHOX2a(2)            --------->TOE1(3)       <---------TOE2(3)----   gtaagcacgactctagatctgaaatctgatctcgatctactaagtcaactctcacaaaccttaacagagatcttaggtttctgaggtttagcagctgcat  17201700                                               ----------->GT1                   ---------->DOF2          ---------->DOF2                --------->ANAC58           --------->YAB1                --------->ANAC58     ----------->RAV1(1)                  --------->HSFC1(2)     ---------->DOF2             <---------ARR14(2)                       <---------HSFC1(2)  ------------------------>ANAC81--------->ARR14(2)              <---------O2 ------>DOF2  ---------->DOF2    --------->GLK1(2)    --------->YAB1   ---------->DOF2          -----   aaagaatcaaagagaagaaagcaaagagtagagagaatccaacaatgaaagctaaaacataacatcgacgaggcaaagcttcttgttctctatctccatc  17201800                                                                                           ==========                                                                                  <---------RAP2.6(2)                     <---------ICU4                                         --------->HSFB2a(2)                     --------->YAB1                                   --------->ARR11(3)   <------ZmHOX2a(1)                    <---------ATHB12                   --------->ANAC55(2)  <---------HSFB2a(2)                  --------->WOX13(1)                   <---------ANAC58 ------>ZmHOX2a(2)  ==========      <---------ARR11(3)                               <---------ANAC58 ==========================HOX2a_HOX2a      --------->ARR11(3)                            <---------MYB52(1)<---------ARR11(3) <---------TOE2(3)      <---------ARR14(3)                      --------->ALFIN1      --------->WRKY12 <---------ANAC46      --------->ARR14(3)   --------->ZAT18  <---------ANAC58       <---------MYB52(1)<---------ANAC58 ---->YAB1   <<<<<<<<<TBF1 <---------ZAT14  <---------ANAC58     <---------MYB46(3)  <---------ANAC58   atcaagaagaccttcttcttcaatcatagcgaactgtttttctccagcgtggcccttacgttttgagccgttgatcttggagaagcggcttgaggaagag  17201900                          <------MYB83                                                ----------->HVH21                          --------->At4g35610                                        ------->MYC3               ------>ZmHOX2a(2)                                                     <-------MYC3              <------ZmHOX2a(2)                                                     <---------ANAC46             --------->ARR11(3)                                                     --------->bZIP60(2)             <---------ARR11(3)                                                     <---------ANAC55(2)             --------->ARR14(2)                                                     --------->TGA1a             <---------ARR14(2)                                                     --------->ANAC55(2)            --------->GLK1(1)                        <---------REM1(1)              <---------O2            <---------GLK1(1)                        <-----------RAV1(1)            --------->O2        --------->ALFIN1  <---------At4g35610     --------->ICU4                    <---------TGA1a        <---------ANAC46  <------MYB46(1)  <---------ANAC58                         <---------bZIP60(1)      <---------ANAC46   <---------MYB46(3)<---------ANAC46                         --------->bZIP60(1)     --------->ALFIN1    --------->ALFIN1  <---------ANAC58                       ------------->DYT1  --------->GLK1(2)     <--------P        --------->ATHB12                        <-------------DYT1 ====================HOX2a_HOX2a      --------->ALFIN1                    --------->TOE1(2) =====================HOX2a_HOX2a--------->MYB52(1)--------->YAB1<-----------GT1<-----------HVH21   tgagaatgtggtggagatcccatcgggctggtgagtaccggtgttgagtggaatgatgttgctgttttctccccatcgtgggagtcacgtgatggagatt  17202000                         --------->CCA1(2)                         <------ZmHOX2a(2)                        --------->ARR14(2)                        <---------ARR14(2)                        --------->AGP1                        <---------ARR11(3)                        --------->ARR11(3)                       --------->GLK1(1)                      ----------->ARR10  <---------ZAT2                 <---------ANAC46        <---------At4g35610              <---------ETT(2)           --------->ZAT2    <---------LBD16              --------->ETT(2)           --------->At4g35610--------->TOE1(1)              <---------WRKY12        ---------->DOF2    <---------O2         <-------TEIL              <---------WRKY38(1) <---------DEAR3(1)     <---------ZAT2    <---------ANAC46              <---------DEAR3(1) <------NtERF2           --------->O2      <---------ANAC58              ----------->HVH21<---------DEAR3(1) <---------ANAC58 <------MYB83 ------->TEIL           <------MYB83<---------GLK1(1)------->TEIL <-----------HVH21     <---------ANAC58           <------MYB46(1)------>ZmHOX2a(2)       <---------ANAC58 <------MYB46(1)                  -   ggacgaagtaggctggtcgacggggagatctagtcggcgatgaagctgagaggcttgtcacctcggagtcggtcttcgcgtgcatcttgagattggaatg  17202100                                                                  --------->ATHB12                                                              <---------WRKY38(1)                                                             ------------>CBF                                            *TSS      --------->ATHB51                                            --------->ANAC55(2)  <---------ATHB12                                <---------YAB1        <---------AHL20(2)                        <----                                --------->ICU4        --------->AHL20(2)--------->ARR14(2)     <-----                           --------->ANAC55(2)    <---------AHL20(2)    <---------ARR14(2)     <----- -------->At4g35610        <---------ANAC55(2) <------------CBF--------->WOX13(1)          <---------   gaagatgaacaagtagaagatgagaggttatgtgatgtttgtatttatgtattgaattatttagtcaatgagtggatttgagggccatttgcccattgct  17202200                 <---------YAB1          <---------MYB52(1)       <---------DAG2        --------->TOE2(3)          <----------DOF2                  --------->YAB1      <---------At5g28300   --------->ICU4                    <------MYB83     <-----------GT1        <---------YAB1                    <------MYB46(1) ------DOF2  --------->ANAC58   ------>ZmHOX2a(2)         --------->ATHB12 ----ANAC58  --------->ANAC58<---------ICU4              <---------YAB1 ----ANAC58--------->SPL7 --------->YAB1           <---------AHL20(2) ---CBF --------->TOE1(3) <---------ICU4           --------->AHL20(2)        --------->ANAC46  <-----   ttgtatattaccgtaacgcattatagcatcatgatcgcttttttttttttttttttaatacgattggtaatcaaaatttaagtcacctagtatatagttg  17202300                                                                                 <---------YAB1                                                                               <---------ICU4                            <----------DOF2                                    --------->YAB1               <---------RVE1(1)                                              --------->ICU4  -------               <---------CCA1(1)                                --------->AHL20(2)           <-------              --------->ARR11(3)       <------------------------ANAC81      --------->bZIP60(1)              --------->AHL20(1)    <---------DAG2              --------->AHL20(1)     <---------MYB52(1)              <---------AHL20(1)    <----------DOF2             <---------AHL20(1)   ------>ZmHOX2a(2)          ---------->DOF2   <---------DAG2                      <---------AHL20(2) <---------ARR11(3)     ----------->GT1     <-----------GT1                       --------->AHL20(2)--------->ICU4 ----MYB46(3) <---------ARR11(3) <-----------GT1             --------->YAB1 <---------bZIP60(1) <----   ttgaaataggcaaaaagatatttgtagtaactttttgactttttttttgtttgtgttctctactaataaattgttttgacatcatgatcgttttttttct  17202400                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                      --------->RVE1(1)                                                                                     <---------ARR11(3)                                                                                     --------->ARR11(3)                                                            <---------ANAC46      <---------AHL20(2)   --------->ZAT18                 <---------ANAC46    <---------MYB46(3)         --------->AHL20(2) --->ID1                           <---------ANAC58  <---------ANAC58     ----------->GT1     ------- ----GT1                           <---------ANAC58  <---------ANAC58    --------->AtLEC2    <------- ------DOF2            --------->ANAC55(2)         <---------YAB1 ---------->DOF2--------->AHL20(2)   ttttgtgcattgtatttctagttttatgtattgcattgtgtgtttgaactcatatgcttgttgagggaaaaagacatggaaaattaaaatctcttgtgat  17202500                                                                                            <--------                                                                                           <---------ANAC58                                                                                        --------->DREB2C(2)                                                                                        --------->DEAR3(1)                                                                                      --------->MYB52(1)                                                                                     --------->AtMYB61                                                                                     ------->GAMYB                                                                                     <---------ALFIN1                                                                                    <---------MYB111(2)                                                                                    <---------MYB52(2)                                                                                    --------->MYB46(3)                                                                                    <---------MYB55(2)                                                                                   ------>MYB83                                               <---------ANAC58                    -------->P                                               <---------ANAC58                    ------>MYB46(1)                                       --------------------->WRI1                 --------->MYB55(1)                                      <---------ANAC58                            --------->ANAC46 ------ICU4                           <---------ANAC58   --------->ANAC58        <---------MYB46(2) ----->YAB1                      --------->ANAC58   <------NtERF2                <---------MYB111(1) ---->ICU4                       --------->ANAC58  ------>NtERF2                 --------->MYB46(3) -----YAB1                       ----------->GT1 ---------->ID1    <---------ICU4<---------MYB111(2) -->YAB1                    <----------ID1 <<<<<<<<<MYB2 --------->ANAC58      -------->P  <---------ANAC58 --YAB1               <---------YAB1  <---------ANAC46 ---------->DOF2        <-----------GT1   aattatctaatctatttctgacttctgagtgagacaagttacttggttttcgtcgccaaaagcaaaccattactacaaacttaccaaccaccggcttgtc  17202600  Previous    Next  AGI:  At5g42860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45688.1); similar to H0814G11.12 [Oryza sativa (indica cultivar-group)] (GB:CAJ86345.1); similar to CAA30379.1 protein [Oryza sativa] (GB:CAB53482.1) Range:  from: 17200294    to: 17202144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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