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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                         <---------YAB1
                                                                                         --------->ICU4
                                                                                        <---------TOE2(3)
                                                                                   --------->ATHB12
                                                                                  --------->MYB46(3)
-NtERF2                                                                           <---------ATHB12
---RAP2.6(3)                                                                     ------>MYB46(1)
->DEAR3(1)                                                                       ------>MYB83
--ATERF1(2)                                                                      -------->P
->RAP2.6(2)                                                 --------->ANAC58   --------->AtMYB61
->ATERF1(2)                                      <---------YAB1      <---------ANAC46  --------->YAB1
-RAP2.6(2)                               <-------TEIL       --------->ANAC58   --------->MYB46(3)
 
aagaagttgaacagcatggacgaagtgagcatgaagagtagaagtccatctcattcttggagcacgaatgcttcgtttaagaccaaccattgatgatgag  17092700
                                                            ----------->GT1
                              <------MYB83              --------->ICU4
                              <------MYB46(1)           <---------YAB1   <---------At4g35610
                     --------->CCA1(2)                --------->YAB1     --------->At4g35610
                    <---------ARR14(2)               --------->ICU4   ------>ZmHOX2a(1)
                  ----------->ARR10                  <---------YAB1  --------->TOE2(3)  <-------GAMYB
           --------->ETT(2) <--------P             --------->YAB1 <---------ARR14(2)    ============
       --------->ARR11(3)<---------TOE2(3)      <----------DOF2   --------->ARR14(2)   <---------MYB46(3)
      <---------GLK1(1)  <---------TOE1(3) <---------At4g35610 <---------WRKY38(1)     --------->MYB52(2)
 
cttctcttgaaatctcgaccgtagatttgaggttggaacatgtttgagcgcctttgatgatgatggtcaaatcctaagctcaagagaggtttgttgaaga  17092800
                                                                   ----------->HVH21
                                                               ------>NtERF2
                                                               --------->ABI4(1)
                                                              --------->ANAC46
                                                              --------->DEAR3(1)
                                                             --------->MYB46(3)
                                                             --------->ATERF1(1)
                                                             --------->DEAR3(2)
                                                            <---------At5g28300
                                                          ----------->HVH21
                                                         <-----------HVH21
                                                        --------->LBD16                        =====
                                           <---------ANAC58 <---------ATERF1(1)              -------
                           --------->At4g35610     <---------GLK1(1)               <---------ANAC58
                           <---------At4g35610     --------->ZAT2 --------->LBD16  <---------ANAC46
                      <---------TOE2(3)    <---------ANAC58<---------WRKY38(1)     <---------ANAC58
               <-----------HVH21           <---------ANAC46<---------WRKY12      ------>NtERF2 =====
              --------->TGA1a   --------->HSFB2a(2)--------->GLK1(1)--------->REM1(2)----------->HVH21
              --------->At4g35610  <---------GLK1(2)  <---------LBD16           <---------RAP2.6(2)
              <---------At4g35610--------->LBD16   --------->At4g35610          <---------LBD16=====
            <-----------RAV1(2) <---------HSFB2a(2)<---------ZAT2<---------ANAC46--------->LBD16
========================MYC_MYB --------->HSFC1(1) <---------At4g35610         <---------LBD16 <----
 
agttgttctcatggctcaggtcactgaggctgcttccagaatcactgcttgtggagctccggtcaccgccgtgaagaggttttccggcgtgatagttagg  17092900
                    --------->HSFB2a(2)
                    <---------HSFB2a(2)
                   ------>ZmHOX2a(2)
                  --------->CCA1(2)
                  <------ZmHOX2a(2)
                 <---------ARR11(3)
                 --------->AGP1
                 --------->ARR14(2)
                 <---------ARR14(2)
     ------>ZmHOX2a(2)
    <---------At4g35610
    --------->At4g35610                                                                     <-------
  <---------ZAT14--------->ARR11(3)                                                    <---------YAB1
============HOX2a_HOX2a                                          --------->YAB1 <-----------GT1
-->MYB59         <---------AGP1                    <---------ANAC58   --------->At4g35610   <-------
=========================HOX2a_HOX2a               <---------ANAC58 <---------ICU4 <----------DOF2
==========================HOX2a_HOX2a    --------->YAB1       --------->YAB1    <---------AHL20(2)
--ZmHOX2a(1)   ----------->ARR10    <---------At4g35610 --------->ZAT6<---------At4g35610 <---------YAB1
 
aagactgatctgaagagacagatctgggactgagtttgaagctctcatactgtttcttgactctaacatcatcatctcactattttctttatgattcttg  17093000
                              ---------->DOF2
                         --------->ALFIN1                   <---------ZAT14
                         <---------ANAC46                   --------->ZAT14<---------YAB1
               <------ZmHOX2a(2)                            --------->At4g35610      ----------->GT1
  --------->AHL20(2)  --------->GLK1(2)                     <---------At4g35610    *TSS
--ANAC58      --------->ARR11(3)                       --------->ZAT18   <----------DOF2         ---
--ANAC58      <---------ARR11(3)                       <---------ZAT14<---------ALFIN1      --------
 
tctacttaaatagtggagatcaaagaatgtgtggaaagagaacgagagagagagagagagctctgcagaaacaacacttttattgagggagaaaaaaaag  17093100
         <---------YAB1
        --------->AHL20(1)
        <---------AHL20(2)
      <---------YAB1
     --------->AHL20(2)                                                       <---------AHL20(2)
     --------->AHL20(1)                                                      --------->AHL20(2)
   <---------AHL20(2)                                                        <---------AHL20(2)
   --------->AHL20(2)               <---------YAB1                       <---------YAB1
   --------->AHL20(1)         <---------ARR11(3)                      <---------YAB1
   <---------AHL20(1)        <---------ICU4                     <----------DOF2   ----------->GT1
-------->GT1             <---------YAB1<---------TOE2(3)  <------------CBF  <---------YAB1
-->DOF2 <---------AHL20(1)  --------->ICU4            --------->GLK1(2)  --------->ICU4        -----
 
aggtaaaatattatatttctccatcgttgtcattatctcattaatgtattaaacaaaattctattgtctttttcttattattaaatggtttttttttcca  17093200
                                                       --------->TOE2(1)
                                                       --------->TOE1(1)
                                                      ------>ZmHOX2a(1)
                                                <----------DOF2            ------------>CBF
                      <---------YAB1      <---------ZAT14                 >>>>>>>>>>>>>>>>>LFY
                  --------->TOE2(3)       --------->ZAT14        ------>MYB46(1)
                  <---------MYB59         <---------ZAT18        ------>MYB83
------>RAV1(1)  <---------ARR11(3)        --------->ZAT18xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 
acaaaacaattctctacaataccttattattctgaaaacgcttattgcactcttttcctagtactaccaaatgttagtcccaatgtaataaccaaaaaaa  17093300
                            <---------ANAC46                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           --------->ZAT6
                       <---------AHL20(2)                    --------->AHL20(2)
                     <-----------TBP                         <---------AHL20(2)          <----------
                   --------->AHL20(2)                 --------->YAB1    <---------MYB52(2)
                   --------->ICU4         <---------MYB52(2)--------->AHL20(2)           -----------
                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     <---------AHL20(2)    --------->AHL20(2)
                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->AHL20(1)    --------->YAB1
               <------ZmHOX2a(1) <------------CBF    <---------YAB1     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
              ----------->GT1 xxxxxxxxxxxxxxxx>smallRNA(s)  <---------AHL20(1)   <---------YAB1   xx
           --------->ALFIN1 ----------->GT1 --------->MYB52(1)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 
aaaaaaaactagaagtgaggaaatatttatagggtgaattgcaaaactaactgtttttgataatttatttaagaaactaacactataatatacaaaatgt  17093400
                                                                                         <---------DREB2C(2)
                                                                                         xxxxxxxxxxx
                                                                                         --------->ALFIN1
                                                                                         <---------DEAR3(1)
                                                                                        <------NtERF2
                                                                                        <---------ABI4(1)
                                                                                       <---------DEAR4(2)
                                                                                       ------>NtERF2
                                                                                       <---------ATERF1(1)
                                                                                       <xxxxxxxxxxxx
                                                                                      --------->ATERF1(2)
                                                                                     <---------ANAC58
                                                                                     <---------ANAC46
                                                                                     --------->ATERF1(1)
                                                                                     <---------ORA47(1)
                                                                                     xxxxxxxxxxxxxxx
                                                                                    <---------ATERF1(1)
                                                                      <---------MYB46(3)--------->ATERF1(1)
                                                                    <-------GAMYB <---------RAP2.6(2)
                                                                   <---------MYB46(3)<---------ANAC58
                                                                  <---------AtMYB61xxxxxxxxxxxxxxxxx
                                                                  <---------YAB1--------->ABI4(2)
                                                             <---------MYB46(3) --------->MYB55(2)
                                                            <---------AtMYB61   <---------MYB46(3)
                                                            <---------ANAC46   <---------DEAR3(1)
                                                            --------->ALFIN1  <---------MYB52(1)
                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                                         --------->ALFIN1   <---------DEAR3(1)
                                                         <---------AtMYB61  --------->MYB55(2)
                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                                         <---------ZAT6 <---------RAP2.6(2)
                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                                        xxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ORA47(2)
                                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)-------
                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxx
                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-------
                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------
                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxx
                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <-------GAMYB
                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------DEAR3(1)
                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------RAP2.6(2)
                                                  <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxx
                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxx
                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------ATERF1(2)
                                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<------NtERF2
                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxx
                                             xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ALFIN1
                                            <---------WOX13(1) xxxxxxxxxxxxxxxx>smallRNA(i)<--------
                                           <------------CBF<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---
                                          --------->ATHB12<---------MYB46(3)<---------MYB46(3)xxxxxx
                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------AtMYB61----
        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ATERF1(1)
     --------->ZAT6                      <---------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<-------
   <-----------GT1      <-----------GT1  xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------DREB2C(2)<----
-----AGL15      ----------->GT1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------ORA47(1)<------
---->AGL15   ----------->GT1         <----------DOF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------MYB46(3)
xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------ANAC46<------NtERF2
 
agaaattaacactagagggtagtaaaattactaaattagtctttttgattggagatggtagtggtggtgatggttgtggccggtggtggccggcggtggt  17093500
                                                                                       <---------MYB46(3)
                                                                                      --------->ALFIN1
                                                                                      <---------AtMYB61
                                                                                    <---------MYB46(3)
                                                                                   <---------DEAR3(1)
                                                                                 <---------MYB46(3)
                                                                                <---------AtMYB61
                                                                                <---------DEAR3(1)
                                                                               <-------GAMYB
                                                                               <---------ABI4(1)
                                                                              <---------MYB46(3)
                                                                             --------->ALFIN1
                                                                             <---------DREB2C(2)
                                                                             <---------DEAR3(1)
                                                                --------->ALFIN1--------->ALFIN1
                                                            <------NtERF2  ------>NtERF2--------->ATERF1(1)
                                                            --------->LBD16<---------DEAR4(2)
                                                            <---------LBD16<---------ATERF1(1)
                                                         --------->PCF5   --------->ATERF1(2)
                                                         --------->ATERF1(1)--------->ATERF1(1)
xxxxxxxxxxxx>smallRNA(se3)                      <---------AtMYB61         <---------DEAR3(1)
xxxxsmallRNA(i)                           <--------P    --------->PCF2    <---------RAP2.6(2)    ---
x>smallRNA(i)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------AtMYB61--------->MYB55(2)
xxxx>smallRNA(l2)        <------MYB46(1)--------->MYB55(2)<---------LBD16 <---------ATERF1(2)    <--
-->MYB55(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------DEAR3(1)<------NtERF2    <---
xxxxxxxxxxxxxx>smallRNA(fl3)        <---------AtMYB61   <---------PCF5   <---------ANAC58       ----
--DEAR3(1)              <---------AtMYB61<-------GAMYB  <------NtERF2    <---------ANAC46      <----
->ALFIN1<---------AtMYB61<------MYB83  <---------AtMYB61----------->TCP11(1)<---------ABI4(1)<------
xxxxxxxxxxxxxx>smallRNA(se3)       --------->ZAT14   --------->ATERF1(1) xxxxxxxxxxxxxxxx>smallRNA(i)
xxxx>smallRNA(i2)    --------->ALFIN1<---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   -------
xxxxxxxxsmallRNA(le3)<-----------RAV1(1)<---------MYB46(3)<---------DEAR3(1)<------NtERF2    <------
xxxxxxxx>smallRNA(fl3) <--------P  <---------ZAT14 <---------AtMYB61     <---------ANAC58<---------RAP2.6(2)
-ABI4(1)<xxxxxxxxxxxxxxxxsmallRNA(s)--------->ALFIN1<---------MYB46(3)   <---------ORA47(1) <-------
------MYB46(3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->ATERF1(1)<---------ORA47(2)<------
xxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        --------->ATERF1(1)<-------
----->MYB55(2) --------->ETT(1)   --------->ALFIN1 --------->ALFIN1     <---------ATERF1(1)<------NtERF2
--AtMYB61   --------->MYB55(2) ------>ZmHOX2a(2)<-----------RAV1(1) --------->MYB52(2)<---------DEAR3(1)
-----ANAC46 <---------MYB46(3) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------MYB46(3)--------->ALFIN1
---MYB46(3)<---------AtMYB61xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->MYB55(2)<---------AtMYB61
 
ggatggagttgatggtggtcggaagtgttggtgatcggtgtggtggttgctatggtggtggcccgcggtggtagtggccggcggtggtggtggtggccgg  17093600
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AGI:  At5g42630.1   
Description:  ATS/KAN4 (ABERRANT TESTA SHAPE); DNA binding / transcription factor. similar to KAN (KANADI), transcription factor [Arabidopsis thaliana] (TAIR:AT5G16560.1); similar to KANADI-like transcription factor FEATHERED [Ipomoea nil] (GB:BAE73187.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:  from: 17091007    to: 17093084    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g42635.1   
Description:  glycine-rich protein
Range:  from: 17093455    to: 17093953    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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