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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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         --------->REM1(2)
      <---------ANAC55(2)
      <---------ANAC55(1)
      <---------ANAC46
      <---------ANAC58
      <---------ANAC58            <---------YAB1
     <-----------------------TaNAC69(2)             <---------MYB55(2)
   <---------MYB52(1)    ----------->HVH21          --------->MYB46(3)
  <-------GAMYB  ==================RAV             -------->P
 <---------MYB46(3)    --------->At4g35610         ------>MYB46(1)                            ------
 <-----------RAV1(1)   ----------->RAV1(2)         ------>MYB83                 <---------ALFIN1
-------->At4g35610     <---------At4g35610      --------->MYB46(3)         --------->LBD16<---------HSFB2a(2)
---------At4g35610 <---------ALFIN1     <---------YAB1        <-------TEIL<---------LBD16 --------->HSFB2a(2)
------At4g35610  ----------->RAV1(1)  <-----------GT1<---------ALFIN1    ----------->RAV1(2) <------
 
gctgctgttgcgtgtaagggccacacatctgaccttgctgattaccatacatccaaccacttgcatacatggtataccctggaacactcttgtctagacc  16977500
                                 --------->TGA1a
                                 --------->ANAC58
                                 --------->ANAC58
                                 --------->ANAC46
                               <---------ALFIN1
                              --------->LBD16
                             --------->ANAC58
                         <---------WRKY18(1)
                        ----------->HVH21                                                        <--
                  --------->HSFC1(2)                                                          ------
                  <---------HSFC1(2)                                                <---------ALFIN1
             --------->HSFB2a(2) ----------->HVH21 --------->ANAC58                 --------->ANAC46
           --------->MYB52(1)--------->ANAC58      --------->ANAC46               --------->AtMYB61
----->RAV1(2)<---------HSFB2a(2)--------->SPL7     --------->ANAC58              --------->MYB46(3)
---AGP1  <---------MYB52(2) <---------LBD16--------->ATHB12                    --------->ANAC46 <---
 
tgaagctatgccactaccagaagcctcttgacccgcacgacagtcttcatttgaacgacatcccatctccaaggctgaatccaaaccacacagttcatca  16977600
                                            ----------->GT1
                                            --------->ANAC58
                                            --------->ANAC58
                                          ---------->DOF2
                 <-------TEIL        <---------At4g35610
       --------->MYB52(1)            --------->At4g35610
     --------->MYB46(3)              --------->ZAT2
     <---------MYB52(2)       <-----------GT1
  <----------ID1--------->CCA1(2)    <---------ZAT2                   <---------WOX13(1)
-------ICU4    <---------ARR14(2)  <-----------RAV1(2)              <<<<<<<<<RAP2.2
--->YAB1       --------->ARR11(3)<---------ALFIN1                  <---------TOE2(3)   <---------AHL20(2)
------YAB1     --------->ARR14(2)--------->AtMYB61             <----------DOF2      ----------->GT1
 
aaattgcaacaagcggaagatacagtagccaaatcaccacagctgaaaagcaaaaatacagtttttcttttagattgacaatccaactagttaattcaca  16977700
                                        --------->ICU4
                           <-----------HVH21                                       --------->ZAT14
       --------->TOE2(3)<---------At4g35610                                      --------->At5g28300
--------->ANAC58        ----------->RAV1(2)                                 <---------YAB1
--------->ANAC46        --------->At4g35610   <---------At4g35610         <---------ICU4
--------->ANAC58       ------->TEIL--------->YAB1 --------->REM1(1)    --------->YAB1
 
actacgaaaaacttaactacaagttgcacctgtcacaagagtaatcttgagctacttctcttgcagagattgaaacatcatcactgtaaactcccataca  16977800
                                                                                            --------
                                                                                      --------->ANAC58
                                                                                      --------->ANAC46
                                                                                      --------->RAP2.6(2)
                                                                                      ------->GAMYB
                                                                                      --------->ANAC58
              --------->MYB59                              -------->P                --------->MYB46(3)
         <---------AHL20(2)                             --------->At4g35610         -------->P------
         --------->AHL20(2)                      --------->YAB1                    --------->MYB52(1)
         --------->ICU4                       --------->HSFB2a(2)        --------->DAG2     <-------
         <---------ATHB51                     <---------HSFB2a(2)       ---------->DOF2    <--------
    ----------->GT1  ---------->DOF2    <---------------AGL15         <------ZmHOX2a(1)    ---------
 
cattgaaccgaaataattcggttccaaagcagaaactttcttccttctactagaataagagctaccatggctaggaaaagtggaatcaaccgcaaccatg  16977900
                           --------->ANAC46
                           --------->ANAC58
                           --------->ANAC58
                        <---------REM1(2)
               --------->ARR11(3)
               <---------ARR11(3)
              <---------GLK1(1)                   ------------>CBF
              <---------RVE1(1)           --------->TOE2(3)
              --------->GLK1(1)          <---------ICU4            <----------DOF2
->YAB1        --------->CCA1(1)          <--------HAHB4 --------->AHL20(2)
----->HVH21   --------->RVE1(1)         <---------YAB1 --------->YAB1
--ICU4        <---------CCA1(1)         --------->ICU4 --------->AHL20(2)      ------------>CBF
-ATHB12      <---------ARR11(3)        <---------ARR11(3)       --------->ANAC58
>MYB46(3)    --------->ARR11(3)        --------->ARR11(3)       --------->ANAC58<---------AHL20(2) -
 
acacagataaactcgagatatcttctctacacgaaaaaacatgatcattaaacttcaataaaaatacaagctttctcaaatattcaatttttagactggg  16978000
                                          <---------------------WRI1
                                     <---------YAB1
             <---------AHL20(2)    <---------ICU4
             --------->AHL20(2)    --------->ATHB12
             <---------AHL20(1)    --------->YAB1
            --------->AHL20(2)    --------->ICU4                                               <----
  ------------>CBF                <---------ATHB12                                            ------
 --------->ANAC58           --------->ANAC58                                           ---------->DOF2
 --------->ANAC58           --------->ANAC58             ---------->DOF2    <---------GLK1(1) <-----
--------->DOF2         --------------->AtSPL8     --------->ZAT6<---------ZAT14--------->TOE1(2)----
 
tttaaagcaatgtcattaaatttgagacagtacccaaatcattacagagagaaacactaagaaagactacacatttatgaaatctgggagcaaagacgat  16978100
          <---------ZAT14                        <---------------AGL15                  <-----------
        <---------ETT(2)                   ------>MYB46(1)                         --------->At5g28300
        --------->ETT(2)                   ------>MYB83                         --------->At4g35610
--ZmHOX2a(2)                             <---------MYB59                       --------->GLK1(2)
--->ARR14(2)                      --------->TOE2(3)---------->DOF2            <---------GLK1(2)
----ARR14(2)                   <----------DOF2  --------->TOE2(3) <---------AtLEC2----------->GT1
-->ZmHOX2a(2)       --------->AHL20(2)   --------->TOE2(3)------------>CBF <---------HSFB2a(2)
 
cgccaagtttgtctacagagcaaaaaaatcgagtctttcttaaacctaatttcttaaagaagacaatatgcatgatacccagaagctgtaacattgaatc  16978200
                       --------->ANAC58
                       --------->ANAC46
                       --------->ANAC58
             <---------ANAC58                                         ---------->DOF2
             <---------ANAC58                                     <------ZmHOX2a(1)------>MYB83<----
             <---------ANAC55(2)                                 ----------->GT1   ------>MYB46(1)
             --------->ANAC55(2)                           <---------ZAT14         -------->P <-----
             <---------ANAC55(1)                           --------->ZAT14        --------->MYB55(1)
             <---------ANAC46                              --------->SPL7        --------->AtMYB61
            <-------TEIL  ---------->DOF2                <---------SPL7          <---------MYB111(2)
           --------->CCA1(2)                           <---------------AtSPL3    <---------MYB55(2)
          --------->ARR14(2)                    --------->LBD16  <------MYB83    --------->MYB46(3)
          <---------GLK1(2)                   <---------LBD16    <------MYB46(1) <---------MYB111(1)
-CBF      <---------ARR14(2) ----------->GT1 <---------LBD16   <--------P        <---------MYB46(2)
 
gaacagagaaccagatacgtgaacacacacaaaggaaaaacatcagacctcgggagaaacagtacggtaggaaaaaagaacacacctaccaaaattttca  16978300
               --------->ANAC58
               --------->ANAC58
         --------->ANAC58
     --------->ANAC58                                                                         ------
     --------->ANAC58   ----------->HVH21                                                     <-----
-----LBD16--------->At4g35610                                                                 ------
----LBD16--------->ANAC58                                              >>>>>>>>>TBF1          <-----
 
gggaagtgaagcaagctcaaggaagcgatgacactgtgatcaaattgaactgaaattgataagaagacatagaagaagaagacatagaagacgaagaagt  16978400
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AGI:  At5g42400.1   
Description:  SET domain-containing protein (TXR7). similar to ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX), histone-lysine N-methyltransferase/ phosphatidylinositol-5-phosphate binding [Arabidopsis thaliana] (TAIR:AT2G31650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21159.1); contains InterPro domain GYF (InterPro:IPR003169); contains InterPro domain SET; (InterPro:IPR001214)
Range:  from: 16971697    to: 16977899    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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