Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->TOE2(3)                    ------>MYB46(1)                                                                 <                    ------>MYB83                                                                   --                 --------->MYB46(3)                                                                --                -------->P                                                 <---------WOX13(1) ------>ZmHOX2a(2)               --------->WOX13(1)                                        --------->ATHB12    --------             --------->MYB46(3)                    <---------ATHB12  <------ZmHOX2a(2)       <------ZmHOX2a(2)             <---------ATHB12                    --------->WOX13(1) <---------ARR11(3)      <--------            ------>MYB46(1)                  --------->YAB1------->TEIL <---------YAB1      <--------            ------>MYB83             <-----------GT1--------->AHL20(2)------>ZmHOX2a(2)     --------- --->YAB1  --------->WOX13(1)--------->TOE2(3) <---------YAB1       --------->ARR11(3)      ---------   aaaccaaaaacaccaatcaaccaatctcaaaacttaatttcactctattatcaatgaaatgaatctctaagatcgtgattgtctatgtaatcgagatcta  16827500        ------>ZmHOX2a(2)        ----------->GT1       <------ZmHOX2a(2)      <---------ARR11(3)                                     ------->GAMYB ----------DOF2                                             <---------MYB52(2)                     -- ------->TOE1(3)                                            --------->MYB46(3)               <------ZmHOX2a(2) ------->TOE2(3)                                          --------->MYB52(1)                --------- ->CCA1(2)                                            <------ZmHOX2a(1)          <---------At5g28300 -ARR11(3)                                          --------->LBD16             <-----------GT1 ----- ---ARR10              --------->ANAC46            <---------LBD16            --------->GLK1(1) ----- >AGP1--------->ARR11(3)                        <---------ARR14(2)           --------->ARR14(2) ----- >ARR11(3)         ----------->RAV1(1)          --------->ARR14(2)           <---------ARR14(2)------   acctttaagatcgtgaaattgcaacacaacattgtaaacaaacacattcaaatccaggaacaacgaacacattacatcggatttacagttctgagatcaa  16827600                ------>ZmHOX2a(2)               --------->CCA1(2)               <------ZmHOX2a(2)              >>>>>>>>>GATA-1              >>>>>>>>>GATA-3                                                 --------->ZAT14              >>>>>>>>>GATA-2                                                 <---------ZAT14        <---------At4g35610                                              <---------ZAT14 --------->RAV1(1)         >>>>>>>>>TBF1                                ----------->RAV1(1) >ARR11(3)    --------->AGP1                      --------->DEAR3(1) --------->YAB1                -- ---->ANAC46  >>>>>>>>>GATA-4                 --------->MYB46(3)   --------->ANAC58                -- ---->ANAC58  --------->ARR11(3)  <------ZmHOX2a(2)                --------->ANAC58  --------->At4g35610 ---->ANAC58  <---------ARR11(3) <---------ARR11(3)            ------>ZmHOX2a(2)  <---------MYB52(1) --->WOX13(1)--------->GLK1(1)   --------->ARR11(3)        <---------YAB1--------->ZAT14      -------   gcaacaatgcagaagagatctaaatcgaagaagaagatcagaaaatcactcaccgaagaagatgatcgcaagcacaacagtgctgtttgctccaaacgag  16827700                                <----------DOF2                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                      --------->SPL7                      <---------TOE1(2)                    <---------SPL7                   <---------ANAC46                   <---------ANAC58                   <---------ANAC58  --------->ATHB12                  <---------------AtSPL3                  --------------->AtSPL3     --------->ARR14(2)  --------->ARR11(3)              <----------DOF2     <---------ARR14(2)  <---------ARR11(3)        --------->At4g35610 ------->ANAC58   <---------------AtSPL8           <---------At4g35610                >>>>>>>>>TBF1-- ------->ANAC58   --------------->AtSPL8          --------->ARR11(3)           <----------DOF2  <---- -->TOE1(2)   <----------DOF2   <---------DAG2    <---------ARR11(3)        <---------TOE1(3) -------   cgagccatatcggaaacttttgcgtacgatctctctttttgatttgaacagagagcttccttttgttttctggtttttaagctttgaagaagaagttagg  16827800                                                                                             --------                                                                                          --------->WRKY45                                                                                          --------->WRKY12                                                                                         --------->ALFIN1                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                       <---------ANAC46                                                                                       <---------bZIP60(2)                                                                                       <---------TGA1a                                                                                       <---------O2--                                                                                       --------->O2<-                                                                                      ----------->bZIP911(1)                                                                                      ----------->STF1                                                 --------->HSFB2a(2)                 <---------TGA2(2)                                                 <---------HSFB2a(2)                ----------->HVH21                                           <---------------AGL15             --------->At4g35610  ---                  <---------HSFB2a(2)      <---------DAG2                    <---------At4g35610 <---       --------->MYB59      <---------AtMYB61    <---------TOE2(3)        *TSS    --------->At4g35610 --------->GT1    --------->HSFB2a(2)      --------------->AGL15         <-----------HVH21--------->WRKY38(1) --ZmHOX2a(1)   <---------ZAT18            <----------DOF2         <-----------GT1<---------At4g35610 -->MYB59  <-------TEIL  --------->ALFIN1 <-----------------AGL3  --------->AHL20(2)----------->TGA1   atgcttaaataggtccagtgcccgaaggtgatggtgaagtagtcgctttttatggaagacgaagaaatttaactatgtcatcggagatgacgtggaccaa  16827900                                    <------MYB46(1)                                    <------MYB83                                   --------->MYB59                                <---------ARR14(2)                           ------>MYB83                           ------>MYB46(1)                          --------->WOX13(1)                      <-------GAMYB                        ------------>CBF                         --------->MYB52(2)           <------ZmHOX2a(2)    --------->ARR14(2)               --------->MYB55(2)          <---------ARR11(3) --------->YAB1                      <------MYB83    --------->SPL7      --------->MYB46(3)                       <------MYB46(1) ---->CBF --------->ARR11(3)<---------ATHB12                     <---------MYB46(3) ------->ARR11(3)      --------->ANAC58                        <---------MYB52(1) --------ARR11(3)      --------->ANAC58                      <---------MYB46(3) ------>YAB1          --------->WOX13(1)   <-----------RAV1(1)<-------GAMYB     <<<<<<<<<TBF1 ------ATHB12   --------->YAB1  <---------GLK1(2)      <---------ICU4      <---------MYB52(1)   ttatcttacgacgatctataatgtcaaccaatcagatttggtcttgtgttggagtaatcgtggccgttggttacttcgtttcttcttcttaattagacaa  16828000                                                                  --------->MYB46(3)                                                                  <------------MYB.PH3(1)                                                                <-----------GT1                                                                <---------ARR14(2)                                                                --------->MYB52(1)                                                          --------->TOE2(2)                                                          --------->TOE1(2)                                                       <---------ARR14(2)                                                     --------->LBD16                                                   <---------LBD16--------->DEAR3(2)                                                  --------->MYB52(1) ------>MYB83       --------->DAG2                                             ---------->DOF2    --------->ARR14(2) --------->ANAC58                                         --------->ALFIN1----------->RAV1(2)       ----------->GT1     <---------MYB46(3)               <------ZmHOX2a(1)--------->ARR14(2)     ----------->HVH21     <-----------RAV1(1)        <---------ICU4   --------->ARR14(2)  ------>MYB46(1)--------->LBD16  <----------DOF2               --------->ATHB12 <---------ARR14(2)------->GAMYB   --------->ANAC58   tgagcttttgttgggccagtcttcttctattacatcattaggagtggaaaagaaccggaacctgagtaaccgactcagaactgacccgaaaaattggatt  16828100                                       <---------AHL20(2)                            <---------ARR11(1)                            ------->TEIL                            <---------ARR14(2)                            --------->ARR14(2)      --------->AHL20(2)                   ----------->RAV1(2) --------->AHL20(2)                  ------->TEIL      --------->AHL20(1)            --------->ARR14(2)      <---------AHL20(1)                                --------->GLK1(2)            --------->GLK1(2)       --------->AHL20(2)       --------->ANAC46        --------->GLK1(1)            <---------ARR14(2)     <---------AHL20(2)      <-----------GT1        --------->LBD16  <-            ------->TEIL   <---------ARR14(1)       <---------AHL20(2)      <---------AHL20(2)     <-      <---------ARR14(2)   <---------CCA1(2)     <---------ARR11(3)        <---------AHL20(2)    <---      --------->ARR14(2) ------>ZmHOX2a(2)       --------->AHL20(1)        --------->AHL20(2)    <---   tgaaatcgaatacgaatccgaacctgatcgtatctaaatattttattcgaatatataaattttactccatactcaaatttaatccgaaaatccaagtatt  16828200                                                                                           --------->ATHB12                                                                                          --------->AHL20(1)                                                                                          <---------AHL20(1)         <---------ANAC58                                                   <---------ARR11(3)         <---------ANAC58                                                   --------->AHL20(1)         <---------ANAC46               <---------YAB1                      <---------AHL20(1)     --        <---------LBD16          --------->TOE1(3)                     --------->MYB46(3) --------->AHL20(2) --------ANAC58                --------->GLK1(2)                     ------>MYB46(1)      <---------AHL20(2) --------ANAC58                ------->TEIL                          ------>MYB83     <---------AHL20(2) ------AHL20(2)               --------->ARR11(3)                   <---------MYB59   --------->AHL20(2) --------GT1              ---------->DOF2--------->YAB1------>ZmHOX2a(2)    --------->AHL20(2)    <--   tacttgaaatttcgggtttcgattccaaaaaagaacctgaaaattatagccaattgatccgaaccaaaaccgaaccaatattttagatttattttattgg  16828300                                                                --------->ANAC46                                                               <---------LBD16                                                             --------->SPL7                                                             ------->TEIL                                  --------->YAB1             <---------ARR14(2)                                 <---------ATHB12            --------->ARR14(2)                               --------->WOX13(1)          <---------SPL7                             --------->MYB46(3)           <---------ANAC58                             <---------MYB59           ------>ZmHOX2a(2)                            --------->ANAC58          <------ZmHOX2a(2)                   <---------MYB52(1)         <<<<<<<<<GATA-1    <-----------------AGL1   --------->ARR14(2)           ------->GAMYB        <-----------GT1     --------->ANAC58         <---------ARR14(2)           --------->YAB1      <---------AHL20(2)    ----------------->AG--------->GLK1(2)--------->LBD16 --------->MYB46(3)  --------->AHL20(2)       --------->SPL7<-----------GT1  <---------ANAC58  --------->ANAC46   ------ ------->YAB1          --------------->AtSPL8   --------->ARR14(2)      <---------ALFIN1  --------->DOF5.7(2) ----ZmHOX2a(2)        --------------->AtSPL3   <---------ARR14(2)  --------->GLK1(1)<---------ALFIN1   atcataaatttatctatccgaatgactcgtacccaatcaggttttactcgaatccgatctgcgtacccggatgtccacccctaaccatcaccgttaacaa  16828400  Previous    Next  AGI:  At5g42020.1    Description:  BIP (LUMINAL BINDING PROTEIN); ATP binding. Identical to Luminal-binding protein 2 precursor [Arabidopsis Thaliana] (GB:Q39043;GB:Q39042); similar to heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) [Arabidopsis thaliana] (TAIR:AT3G09440.1); similar to BIP1, ATP binding [Arabidopsis thaliana] (TAIR:AT5G28540.1); similar to BIP3, ATP binding [Arabidopsis thaliana] (TAIR:AT1G09080.1); similar to Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) (GB:Q03684); similar to Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) (GB:Q03685); similar Range:  from: 16824711    to: 16827874    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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