Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ----------->HVH21                        --------->At5g28300                    <---------ALFIN1                   --------->ZAT14                   <---------ZAT14                <---------ATHB12               --------->ANAC58               --------->ANAC46             --------->AtMYB61             <---------ALFIN1            --------->MYB46(3)                                                     <---------ANAC58           ------>NtERF2<-----------HVH21                                          <---------ANAC58          --------->RAP2.6(2)             ---------->DOF2--------->ZAT6            <---------AtLEC2          --------->ANAC46    ----------->GT1           <---------YAB1          ------->PIF5 ---ZmHOX2a(1) --------->ANAC58     ---------->DOF2  <---------AHL20(2)         <-------PIF5 >HVH21  --------->MYB46(3) <---------ANAC46   --------->TOE2(3)  ----------->RAV1(1)    <----------DOF2   gaagaccagtagccaccactcaacactgtgactggtttcaaaggaaaagcctaaatttatgactagagcgacagtagaggcacttgcatgtctttgtagt  16395700                                                     --------->AHL20(2)                 --------->TOE2(3)                   <---------AHL20(2)              --------->AHL20(2)            <----------DOF2                   <---------ANAC58                  <---------YAB1         --------->GLK1(2)                <---------ANAC58             <---------MYB52(1)       -----         <---------ARR11(3)               <---------ANAC58             --------->DOF5.7(2)   --------         --------->ARR11(3)          ------>ZmHOX2a(1) <---------YAB1 --------->TOE1(3) <---------AHL20(2)        <---------GLK1(2)       <---------At4g35610  --------->ATHB51 --------->TOE2(3) --------->AHL20(2)    ---------->DOF2            ------->TEIL   <---------ANAC58       ----------->GT1--------->AHL20(2)   ttgtgctaaagaatctttatcttattgtttatgaagctcctcttgcttacttgaattatttttgaaaaactacgttaattttctcattaaaaaaatgatc  16395800                                                                           <---------HSFB2a(1)                                                                           <---------HSFC1(2)                                                                           --------->HSFC1(2)                                                                           --------->HSFB2a(1)                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                      --------->SPL7                                                                      <---------TOE1(2)                                                  <-----------GT1   <---------SPL7                                             <----------DOF2        --------->TOE1(2)                                          <---------ATHB12          --------->TOE2(2)           <----                                         ------>MYB46(1)           --------->YAB1              <-----                                         ------>MYB83             <<<<<<<<<ARR1                ------ ->ZmHOX2a(2)                         --------->MYB46(3)          <<<<<<<<<ARR2     --------->ZAT14 ->ATHB12                   ---------->DOF2  ------>ZmHOX2a(1)    --------------->AtSPL3      -------   gggacaatgctagttttctaaaccggtggaaaaagacataaccaatccttttatacatgattttgacaatcgtacgaaaattccagttctctctaatttt  16395900                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                <---------At5g28300                                -------->HAHB4                          --------->AHL20(1)    --------->ARR14(2)                 --------->YAB1                          <---------AHL20(1)    <---------ARR14(2)                 --------->ATHB12         <-----------GT1--------->AHL20(1)      <-----------ARR10                 <---------YAB1   <----------DOF2      <---------AHL20(1)      <---------ARR11(3)                <---------ATHB12 -----AHL20(2)       --------->AHL20(2)         --------->ARR11(3)            <---------MYB59      -- ----AHL20(2)      <---------WOX13(1)        <---------TOE1(3)          <---------MYB59         ----- --->AHL20(2)   <---------YAB1 <-----------GT1 <------ZmHOX2a(1)  <---------ICU4------>MYB46(1) ----- -->YAB1 <---------AHL20(2)<---------AHL20(2)<---------TOE2(3)   --------->ICU4 ------>MYB83 <-------   aatttctttatttacatgttgattaatatatatttaccatttttcttaaggatcttagggtttagggattatgacctaaacctaatgatagaatttaacc  16396000                                                            <-----------HVH21                                                           ------->GAMYB                                                           --------->DEAR3(1)                                                           --------->ANAC46                                                          <------------AtMYB77                                                          --------->DEAR3(2)                                                          --------->MYB46(3)                                                        --------->ARR14(2)               --------->ATHB12                         <---------ARR14(2)          --------->ANAC58                           <---------ANAC58          --------->ANAC58                           <---------ANAC58       --------->TOE1(2)                             --------->ANAC55(2)       --------->MYB46(3)                            <---------ANAC46      --------->DEAR3(2)                        <---------REM1(1) --------->ANAC58     <---------TCP20                           <---------TOE2(3)  --------->ANAC46     <---------TCP15(1)                      <---------AHL20(2)   --------->ANAC58   <---------ALFIN1     --------->PCF2                         <---------AHL20(2)  <---------ALFIN1     --------->AtMYB61 ------->MYB52(2)                        --------->AHL20(2)--------->RAP2.6(2)    <-----------GT1 ---->TOE2(3) --------->ICU4            ----------->TBP --------->MYB52(1)  ----------->TBP------>ZmHOX2a(1) ---->TOE1(3) <---------ATHB12        --------->YAB1 <---------ANAC55(2)    --------->AHL20(2) ----GT1 --------->LBD16    ---------->DOF2 --------->AHL20(2)<---------ALFIN1    --------->ANAC46 <-   ttagttggacccacgaatgatgggcctaagttaagcccaactataaattaatgtagcgtaaccgccacacgctcatctataaatacaccactcctatgca  16396100                                                                    ---------->ID1                       *TSS<---------WRKY18(1)                 <----------DOF2                   --------->ZAT14                    <-----------GT1                           <---- --------ARR11(3)  <---------ZAT18       ------>ZmHOX2a(1)<----------DOF2        <------ZmHOX2a(2)   agacctatagttttatttcagtcgactcttgaccttcaatttcctccgtctctaaatttccttttcttttggctctctctgcgatcgagttcgaaaccgt  16396200                       --------->TOE2(2)            ------>ZmHOX2a(2)           <------ZmHOX2a(2)           --------->CCA1(2)                                                     <---------YAB1          <---------AGP1                                                       --------->YAB1          --------->AGP1 <-------TEIL                                         <---------YAB1          <---------ARR14(3)                                                  --------->ICU4          --------->ARR14(3)                       <<<<<<<<<TBF1            --------->YAB1          <---------ARR14(2)                  <---------ANAC58             --------->ICU4          <---------ARR11(3)           <---------TOE2(2)               --------->LBD16          --------->ARR11(3)           <---------TOE1(2)               ------>NtERF2          --------->ARR14(2)          <-----------RAV1(2)             --------->ANAC46            --- -----MYB52(1)    <-------TEIL <-----------GT1<---------ANAC58       <---------LBD16        <<<<<<<<<TBF1   tccctaatcgaagatctagattcaacatacgttttatctctcaggtttgcttcttcttcgactacgttttctccgcgattatgatgatgccttcttcttc  16396300                                                                             <---------GLK1(1)                                                 --------->ARR14(2)          --------->GLK1(1)                                                 <---------ARR14(2)    ------>ZmHOX2a(2)                                                =============================HOX2a_HOX2a                                                ------>ZmHOX2a(1)     --------->CCA1(2)                                             ================================HOX2a_HOX2a                                             =================================HOX2a_HOX2a                                          <------ZmHOX2a(2)           <------ZmHOX2a(2)                   --------->ARR14(2)     =============HOX2a_HOX2a   <---------ARR11(3)                   <---------ARR14(2)    --------->ARR14(2)          >>>>>>>>>GATA-2                <---------ANAC58         <---------ARR14(2)          >>>>>>>>>GATA-1             <--------P           <---------ARR14(2)                 --------->ARR11(3)         -----            <---------ANAC58      --------->ARR14(2)                 --------->AGP1          --------            <---------ANAC58   ------>ZmHOX2a(1)==============================HOX2a_HOX2a   <--------            <-------GAMYB      ==================HOX2a_HOX2a         >>>>>>>>>GATA-4        ---------       <----------DOF2    <---------At4g35610------>ZmHOX2a(1)       >>>>>>>>>GATA-3  --------->ARR14(2) <----------DOF2<---------ANAC58  <---------GLK1(2)                 --------->GLK1(1) <---------ARR14(2) --->ZmHOX2a(1) <---------ANAC46XXXXXXXXXXXXXXXXXXXX>MIR851-5P   --------->LBD16    --------->DREB2C(2)   ctgctttcactttgggttgcgtttcttcatctcctcgattcgcgatcctcctattcgcatcgatacccagagatctagggtttccaccgatatggatatg  16396400                                                                     <---------ARR11(3)                                --------->ARR14(2)              <---------At4g35610  --------->ARR11(3)            <---------ARR14(2)              --------->At4g35610  <---------ARR11(3)         <---------TOE2(3)                <------NtERF2 ------>GT1             <------ZmHOX2a(1)                   --------->ETT(1) ->CCA1(2)             --------->ICU4                     <-----------HVH21                    <----- -ARR14(2)            <---------TOE2(3)              ------->TEIL   --------->REM1(1)          <----- >ARR14(2)            <---------TOE1(3)              <-------TEIL  <-------TEIL           <---------ZAT6   gataaatcttagggtttcaccgataaggattatggattcgagtttctcttctatgtacattgtcggagctacatcttctcttcttgttgttagtgttagg  16396500                                                                                 <----------DOF2                                                                               --------->ZAT18                                                                               <---------ZAT18                                                                           --------->ALFIN1                                                                   <---------ANAC46  <---------YAB1                                                                   <-----------RAV1(1)                        --------->YAB1                    <------MYB83    <-------PIF5                        --------->ATHB12                  <------MYB46(1) ------->PIF5--------->YAB1 ----TOE1(3)  --------->ANAC55(2)                   --------->AHL20(2)   <---------ANAC58 ----TOE2(3) <---------TOE2(3)      <---------GLK1(1)<---------AHL20(2)  <---------ANAC58  <---------LBD16   gttttgaataggttttaggtgatgaattataggtttagagttctgaattagagatttatttggttttttctgtggacgtggtgctctatgatacctggat  16396600  Previous    Next  AGI:  At5g40870.1    Description:  ATUK/UPRT1 (URIDINE KINASE/URACIL PHOSPHORIBOSYLTRANSFERASE 1); ATP binding / kinase/ uracil phosphoribosyltransferase/ uridine kinase. similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT3G27190.1); similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT1G55810.3); similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT1G55810.1); similar to predicted protein [Physcomitrella patens subsp. pa Range:  from: 16392136    to: 16395880    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g40880.1    Description:  WD-40 repeat family protein / zfwd3 protein (ZFWD3). similar to WD-40 repeat family protein / zfwd4 protein (ZFWD4) [Arabidopsis thaliana] (TAIR:AT5G49200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66448.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 16396123    to: 16398563    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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