Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------LBD16                            <-----------GT1                     --------->YAB1                      --------->AHL20(2)                       --------->AHL20(2)              <---------ARR11(3)<---------ARR14(2)         <---------AHL20(2)              --------->ARR11(3)<---------GLK1(2)     --------->AHL20(2)             <---------CCA1(2)  --------->ARR14(2)  ----------->GT1                       <----------           --------->AHL20(2)--------->HSFB2a(2)    --------->ANAC58        ----------->RAV1(1)     --------->ANAC46 --------->ATHB51  <---------TOE1(2)  --------->AHL20(2)         --------->AHL20(2) -----At5g28300      <---------MYB52(1) <---------TOE2(2)  --------->AHL20(1)       --------->TOE2(3) ------GT1 --------->YAB1 <-----------GT1           --------->ANAC58       --------->MYB46(3)  <-----   cccctaaacacaattatatctccattattttctcgattcgcgcatgtttctctcaagtaaataaaataaaaatcccaacaacaaaacattaaaaaccctt  14477600                                                                                       <------ZmHOX2a(2)                                                                                      <---------ARR14(2)                                                                                    --------->DEAR3(1)                  <-------TEIL                                           <-----------GT1           <-----------HVH21                                <---------CCA1(2)       --------->MYB46(3) -GT1  <---------ALFIN1                         <---------ANAC46    <---------MYB52(1)--------->ARR14(2) -----DOF2<----------DOF2                    ----------------------->TaNAC69(2)  <---------ALFIN1   tctctcttcccactttcacatccatagctaaacccttgaagaagattgtttagtgtgttctcgtctcttcgtttatttcttctccaccgatccaacaatg  14477700                                                                           <-----------------AGL1                                                                    <---------CCA1(2)                                                                   ------->TEIL                                                                   <---------ARR14(2)                                                                   <---------ARR11(1)                                                                   --------->ARR14(2)                                                                   <-----------ARR10                                                                  <---------CCA1(2)                                                                <---------ANAC55(1)                                                                <---------ANAC46             --------                             <---------MYB52(1)                 <---------ANAC55(2)          --------                 ------>NtERF2                                  --------->ANAC55(2)         <--------          --------->WOX13(1)--------->TOE2(3)     <---------TGA1a <---------ARR14(1)        ---------        --------->WRKY18(1) ----------------------->TaNAC69(2)  <---------ANAC58          --------->ZAT14      --------->LBD16      ----------->GT1        --------->TGA1a--------->LBD16          <---------ZAT14    <---------LBD16   <---------YAB1       <---------CCA1(2)    <---------ANAC58          <---------ZAT18   ctactctccggtcaatctccgactctgattcgttaatctccctccgtctctctcgtctgattccttccgtatctctctctgattttggccagagcacgct  14477800                                                                                              <------                                                                                              <------                                                                                            ---------                                                                                            <--------                                                                                           ------>ZmHOX2a(2)                                                                                          -----------                                                                                          <----------                                                                                          -----------                                        ------>ZmHOX2a(1)                                 <----------                          <---------ANAC55(2) <---------TOE2(3)                         --------->YAB1                          --------->ANAC55(2) <---------TOE1(3)                        <---------YAB1                       <---------MYB52(1)--------->ATHB12                         -------------------                      <-------GAMYB     <---------YAB1                           ------>ZmHOX2a(2)                 <---------SPL7        --------------->AGL15                   <---------ARR14(2)    --------->YAB1 --------->SPL7     <-----------------AGL1                   --------->ARR14(2) ->ANAC58        <---------MYB52(1)   <-----------------AG                     <---------AGP1 ------- ->ANAC58       --------->LBD16     --------->ARR14(2)              <------------CBF<---------MYB52(1) -ZAT18        --------->ANAC46     <---------ARR14(2)     <---------ANAC58 --------->HSFB2a(2) >ZAT18       <---------LBD16      <---------MYB52(1)      <---------ANAC58 <---------HSFB2a(2)   tgataatcaaaatttctccggtacggttatgtaatccgtttcctgattagggttttgaatttcgtcttcgtattgtttctcgatctgttatgatcgtacg  14477900    <---------MYB52(1)  <---------ANAC46 ---------->ID1 ---TOE1(2) ---TOE2(2) >TOE1(2) -SPL7 <------------CBF    <---------AHL20(2) ---->AtSPL3               --------->AHL20(2) -----AtSPL8       <---------MYB52(1) ---->AtSPL8      <-------GAMYB                                                                    <- -----AtSPL3   <---------MYB52(1)                             --------->ZAT14                  <----- ---->TaNAC69(2) --------->MYB52(2)    <---------YAB1         <---------ZAT14      ----------->ARR10 -->SPL7      <-----------HVH21  <---------YAB1          <---------YAB1<----------DOF2--------->CCA1(2)   tttttcgtttattgttcgtcagttattttttaattttgattttgattcgttgtgaaattttgactgtaggggtctttatatgactgagatttgagaacat  14478000                                                               <----------DOF2          ---------->DOF2                                  --------->ZAT18       ----------->GT1              ---------->DOF2     --------->ALFIN1      --------->DAG2            --------->ANAC58       ------->MYC3                    ----------->HVH21     ---------->DOF2            --------->ANAC58       <-------MYC3        <---------GLK1(1)   <----- --------ANAC46             --------->MYB52(1)    <---------AHL20(2)      --------->ARR11(3)   <----- -------CBF               <---------MYB52(2) <---------YAB1<---------ZAT18<---------ARR11(3)  -------   tgtgtagaaaagtaaagaaatgttagaaactaacgagcaaaagggttttgatttaaacgtgtgtgcttcaattgaagatttcagtgagtctgacattaag  14478100                       <---------MYB46(3)                      <---------WOX13(1)                      <--------P                       <---------TOE2(3)             --------->GLK1(2)                     <-------GAMYB            <---------WOX13(1)   --------->DAG2   <---------GLK1(2)                    <---------MYB46(3)      --------->ATHB12 ----------->GT1  <---------ANAC58   ----------->GT1  <------MYB46(1)        <---------YAB1--------->YAB1--------->ATHB12 <---------YAB1 ----TOE1(3)        <------MYB83<---------ANAC46 <---------TOE2(3)---------->DOF2 ----------->ARR10 ----TOE2(3)       <---------AtMYB61    --------->GLK1(2)<------ZmHOX2a(1)    <---------ANAC58<------ --->DOF2          --------->MYB59--------->ALFIN1     <---------TOE1(3) <---------WOX13(1)   <------   gctgagggtgaaactgatagtttggttgatggtaatgtggagaatgtgattgagattaaggataagaaaaaagtgattgagcgtgagattctcattacgc  14478200                                                                                                    <                                                                       ---------->DOF2           ----                                                  <---------ICU4  ---------->DOF2                <---            <-----------RAV1(2)             --------->YAB1     ----------->HVH21         <---------MYB46(3) ---ANAC55(2)      <-----------RAV1(1)   ----------->GT1      --------->At5g28300       <---------AtMYB61 ---ANAC46  ===================RAV   <---------ZAT14         ----------->GT1          --------->MYB52(2)   gtagggttcttcgctcaggctctgtggcaagggatttagtaaacagtgataaacattgtaaggctgtgaaaaggaaaggaaatgttgttagtggtggaag  14478300                                                                      <---------At4g35610                                                                 <---------LBD16                                                                <---------ANAC58                                                                <---------ANAC46                                                                <---------ANAC58                                                               <-------TEIL                                                              --------->GLK1(2)             ---------->DOF2                                 <---------GLK1(2)         --------->At4g35610                                 --------->ARR14(2)         <---------ANAC46                                    <---------ARR14(2)         ----------->GT1                                    <---------HSFB2a(1) <-------GAMYB                    --------->ALFIN1          <---------GLK1(1)              ---------- -----------RAV1(1)            <------ZmHOX2a(1)           ----------->ARR10           <---------ANAC46 ----->ARR14(2)             <-----------RAV1(2)           <------ZmHOX2a(1)          --------->ZAT14 ------ARR14(2)      ----------->GT1                ----------->RAV1(2)              <---------ZAT14   ttctgttgatgaggtgaaagaagaagtgaaacaggagtgtgttaagtctttggtacctgaggagattcgtggagatgattttcgaagtgaagtgaaagtg  14478400                  --------->At4g35610                  <---------At4g35610                <-----------RAV1(2)               <------ZmHOX2a(2)           <---------WOX13(1)        <---------YAB1                                                                         <-----      ================HOX2a_HOX2a                ---------->DOF2                             --------      <------ZmHOX2a(1)                       --------->TOE2(3)                             <--------    <---------TOE1(3)                        --------->ANAC46                        --------->WOX13(1)    <---------TOE2(3)               ---------->DOF2    <------ZmHOX2a(1)           --------->WRKY18(1) >DOF2--------->YAB1       ---------->DOF2<---------WRKY12    <------NtERF2    --------->At4g35610  -   gaatctaaggatgatagatcagatgatggaaaagaagagaaagttcaacgtaaaagaggaaggcctcgaaagtttgggatgagcagtcaatctgatgata  14478500  Previous    Next  AGI:  At5g36740.1    Description:  PHD finger family protein. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT5G36670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22541.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 14478020    to: 14482957    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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