Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                            <---------RAP2.6(3)                   ---                                                       ------->MYC3                              <---                                                       ------->PIF4                              <---                                                       <-------MYC3                              ----                                                       <-------PIF4                              ----                                                       ------->PIF5                              <---                                                       <-------MYC4                              ----                                                       ------->MYC4                              <---                                                       <-------PIF5                              ----                                                       <-------MYC2                             -----                                                       ------->MYC2                             <----                                                      --------->PIF3(3)                         -----                                                      <---------PIF3(3)                         <----                                                      <---------TGA1a                           <----                               --------->AtMYB61      --------->TGA1a                           -----                               --------->ZAT6         --------->O2                              >>>>>       <---------ALFIN1        <---------ALFIN1       <---------O2  --------->ZAT6              <<<<<      --------->LBD16         --------->MYB46(3)     ------------>OsbHLH66                      -----     --------->HSFB2a(2)    <---------ALFIN1        <------------OsbHLH66                       <---- ------->ARR11(3)         --------->TCP16(2)   <-----------GT1    <-----------GT1             <------ ----------GT1           --------->PCF2    --------->AHL20(2)    --------->YAB1              <------NtERF2 --------ARR11(3) --------->MYB52(1)       <---------AHL20(2)    <---------ICU4        <---------YAB1 ------YAB1      ----------->HVH21   --------->ZAT6 <---------ALFIN1<-----------GT1 <---------YAB1--- ---YAB1<---------ALFIN1<-----------TCP11(1)<---------AHL20(2)  --------->ICU4------>ZmHOX2a(1)------   ttatcttccccaacttgccctaacgtaggcccaccactaccactattaatttccccacgtgccgaaattatcacttcttcctcggtattatggtcgccac  7258900       <---------ANAC46    --------->ALFIN1    ----------->HVH21    ----------->TGA1   <-----------HVH21   <------NtERF2   --------->ATERF1(1)                                                              <------NtERF2   --------->At5g28300                                                             ------>NtERF2  <---------MYB46(3)                                                              --------->bZIP60(2) <---------ANAC46                                                                 <---------bZIP60(1) <---------DREB2C(2)                                                              --------->bZIP60(1) <---------DEAR3(1)                                                               <---------ANAC46 ---------ABI4(1)                                                                 --------->O2 ------NtERF2                                                                    <------NtERF2 -------->HVH21                                                                  ------>NtERF2 ----MYC4                                                                        --------->RAP2.3(1) ----PIF5                                                                       <---------RAP2.3(1) --->PIF5                                                                       <---------ATERF1(1) --->MYC4                                                                       ------>NtERF2 ----MYC2                                                                      <---------RAP2.3(2) --->MYC2                                                                      <---------DEAR3(1) ----MYC3                                                                     <---------LBD16 --->MYC3                                                                  <---------At4g35610 ---->O2                                                                   --------->ZAT2 -----O2                                                                   ----------->RAV1(2) ---->bZIP60(2)                                                        <---------ARR14(2) -----bZIP60(2)                                                   ----------->RAV1(2) -----PIF3(3)                                              <---------STY1(2)  --------->At4g35610 ---->PIF3(3)                                      --------->MYB52(1)  --------->ARR14(2)          <- >>>>>HY5                 --------->MYB55(2)       <---------ARR14(2)  ------->TEIL<-----------HVH21- <<<<<HY5                 <---------MYB46(3)       --------->ARR14(2) <---------GLK1(2)           <-- ---->TGA1a              --------->ALFIN1------>ZmHOX2a(1) --------->STY1(2)  <---------At4g35610---- -----TGA1a              <---------AtMYB61  <-----------RAV1(2)   ====================RAV       ----- ---ALFIN1              <---------MYB52(1)--------->ANAC46 <---------ZAT2  --------->At4g35610  <---- ------>ALFIN1         --------->LBD16------>ZmHOX2a(1)   --------->ANAC58 <---------ZAT2   --------- >NtERF2             <---------LBD16 <---------ALFIN1     --------->ANAC58<-----------RAV1(1)  ------   gtggcggtgacggatgatgttgttccggtggtagtagctcctcctcgcaggcgaaacggctagctacgacctgaatctgctgcggcgtcagagaacgacc  7259000                                                                                       <---------DAG2                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                    --------->RRTF1(3)                                                                                    --------->DREB2C(2)                                                                                    --------->RRTF1(2)                                                                                    <---------ALFIN1                                                                                    --------->RAP2.3(3)                                                                                    --------->RAP2.6(2)                                                                                   --------->RAP2.6(1)                                                                                   --------->RAP2.3(1)                                                                                   --------->ORA47(2)                                                                                   --------->RRTF1(1)                                                                                   --------->DEAR4(2)                                                                                   --------->ATERF1(1)                                                                                   <------NtERF2                                                                                  <---------ATERF1(1)                                                                                  ------>NtERF2                                                                                 --------->ANAC46        <---------LBD16                                                         <-------MYC3     <---------HSFB2a(1)                                                        ------->PIF4     <---------HSFC1(2)                                                         ------->MYC3     --------->HSFB2a(1)                                                        <-------MYC2    ---------->TaMYB80                                                          ------->MYC2    --------->GLK1(2)                                                           ------->PIF5    <---------ARR14(2)                       ------>NtERF2                      <-------PIF5    --------->ARR14(2)                      <---------TCP16(1)                 --------->ANAC58   <---------GLK1(2)                        --------->PCF2                     <---------ATERF1(1)   <---------GLK1(1)                        <---------PCF5                     --------->ANAC46   --------->GLK1(1)  <------NtERF2<---------ZAT18                    <------NtERF2--------->ERF1 --------LBD16       <---------LBD16      --------->LBD16           --------->O2<-------PIF4  ------- -------->LBD16     <---------LBD16--------->ZAT18                  <---------ANAC46--------->DEAR3(1) -------LBD16       <---------ANAC46    <---------LBD16            ------>NtERF2<---------ABI4(2) ----->MYB52(1)     --------->ETT(1) <---------ZAT2               --------->DEAR3(1)--------->RAP2.3(2) ---->AtMYB61  --------->ARR14(2) <---------ANAC58         <---------ZAT14     --------->ANAC58 -----ALFIN1   <---------ARR14(2) <---------ANAC46         ---------->DOF2 --------->ANAC58   <------ >MYB46(3)--------->LBD16    <---------REM1(1)             --------->ZAT14 --------->ANAC58   <------ --->MYB46(3) <------ZmHOX2a(1)   <---------ANAC58      ----------->GT1  ---------->DOF2      -------   accgggaatctccggaggattgtcggggaagttgaagcgtgctccggggccacgaagacagtaaagagccgcgtcgaaagcacgcgccgccttctcagca  7259100                                 --------->ALFIN1                                 <---------MYB52(1)                               <----------DOF2                               <-----------RAV1(1)                               <---------MYB46(3)                               --------->MYB55(2)                           --------->ANAC58                           --------->O2                           --------->TGA1a                           ===============bZIP_DOF                           --------->ANAC58                           =============MYC_MYB                        ----------->HVH21                      ------>ZmHOX2a(1)                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                   --------->ANAC58                   --------->GLK1(2)                   --------->ANAC58                  --------->ZAT14                  --------->ARR14(2)                  ------>NtERF2                      <---------ZAT14                  <---------ARR11(3)                 <---------ALFIN1                    <---------ZAT18                  --------->AGP1<-------GAMYB        --------->RAP2.6(2)            ----------->RAV1(2)                  --------->ARR14(3)                 --------->DEAR3(1)          --------->SPL7                  --------->ARR11(3)               <---------At4g35610         --------->LBD16                  <---------ARR14(2)               --------->At4g35610         <---------SPL7<-------   ---------->DOF2<---------ARR14(3)<---------ANAC46--------->MYB46(3)        <---------ANAC46   ==================================bZIP_DOF------->TEIL                     <---------ANAC58 -->ZAT2          <---------GLK1(2)<---------LBD16--------->ANAC46            <---------ANAC58 ---ZAT2  <---------MYB59 <---------LBD16    --------->GLK1(2)           ------>ZmHOX2a(1) ------->TEIL ---At4g35610-------->P<-----------HVH21 <-----------------------TaNAC69(2)------------------>SPL14 -->At4g35610========================MYC_MYB <-----------ARR10    <---------ALFIN1<---------ALFIN1   gagtcgaaagagcctaaccagatcctgtcacggctgttggggagacgaatctcagccacccattttccccacttcctcttccgtacacctgtgtactttg  7259200                                                        <------MYB83          <---------ARR11(1)                            <------MYB46(1)          --------->ARR11(3)                           <---------TOE2(3)          <---------ARR11(3)                     <---------WOX13(1)          <---------ARR14(2)                --------->YAB1                                       ----          --------->ARR14(2)               <---------YAB1                                      <-----    ------->TEIL                         --------->CCA1(2)                                     <-----  <-------TEIL                          --------->ARR14(2)                                     ------  --------->HSFC1(2)                    <---------ARR14(2)         ------->TEIL    <---------MYB52(1)  <---------HSFC1(2)               --------->CCA1(2)   --------->MYB59  <-----------GT1        ------ ---DOF2 <---------CCA1(2)    ---------->DOF2 <---------YAB1   <---------TOE2(3) <---------TOE2(3)   gggatgcatccatatctctaaatgcagagagggaaagagatggatatgatgatagattaggttttaatgtatattcacttattcaggtatgttttggagc  7259300                    <---------ANAC58                    <---------ANAC46                  <---------RAP2.3(1)                  ------>NtERF2                 <---------RAP2.3(2)        <---------ZAT6      ----------->GT1    --------->ZAT14 <---------ANAC58                            --------->YAB1                      <    <---------ZAT14<------NtERF2<-----------TBP              --------->YAB1             <---------ZAT2 ------->HVH21   <---------ANAC46                         <---------ZAT6                <---------At4g35610 ----ZAT2        <---------DEAR3(1)                       ----------->GT1         <-----------HVH21 < ----At4g35610   <---------RAP2.6(2)     <-------MYC3   <---------ZAT14     >>>>>>>>>TBF1<---------ANAC46 --->ZAT2  *TSS  <---------RAP2.3(3)     ------->MYC3   --------->ZAT14  >>>>>>>>>TBF1  --------->ZAT2 --->At4g35610  --------->RAP2.6(3)  <-------TEIL       <-------TEIL  >>>>>>>>>TBF1    <---------TOE1(2)   tgacagtatagtgaaaatggcggcttgtgagtgtatatatacatgtgtttgcgataagtacagttataagaagaagaagaagaaggtcgcagcttgtatg  7259400                                                                  <---------MYB52(1)                                                            ------->MYC4                                                            ------->PIF5                                                            <-------MYC4                                                            <-------PIF5                                                            <-------MYC3                                                            ------->PIF4                                                            ------->MYC2                                                            <-------PIF4                                                            ------->MYC3                                                            <-------MYC2                                                           <---------O2                                                           <---------TGA1a                          ===========================================bZIP_DOF                          ---------->DOF2                  ==========================================                    <---------ANAC58                       --------->TGA1a                    <---------ANAC55(1)                    <---------ANAC55(2)                    <---------ANAC55(2)                    ==============MYC_MYB                    <---------bZIP60(2)                    --------->O2      <-----------HVH21   <---                    <---------ANAC58                       --------->ANAC55(2)                  -----                    <---------ANAC46       --------->ICU4 ------------>OsbHLH66                 <----               --------->ATHB12--------->LBD16           <---------ALFIN1 ------>ZmHOX2a(1)  <-------              --------->ICU4  --------->ANAC46      <-----------GT1      --------->TOE2(3)<----------  <---------MYB46(3)--------->ANAC55(2)    <---------YAB1<------------OsbHLH66       --------->YAB1 -------GAMYB <---------YAB1<---------ANAC46      <---------ICU4 <-------GAMYB     --------->ANAC58 ----------DOF2<---------ICU4<---------LBD16     <---------YAB1 ----------->GT1    --------->ANAC58   cgcgttgttgaagaagatgattacgtggtaacgcggaagtaagtcatgtttattattccacacgtgctgttatttcctcagtcacaagcatatttttacc  7259500                                                                              ----------->GT1 =======bZIP_DOF                                  <----------DOF2      <---------YAB1 -------DOF2 <-----------GT1                     <---------ICU4      --------->YAB1                 < ---------->AGL15   <----------ID1         <---------bZIP60(1)      <---------ATHB12               -- -----DAG2 <----------DOF2                 --------->bZIP60(1)  <---------AHL20(2)                 <- ----GT1<-----------GT1            --------->TOE2(3)  <-----------GT1<---------ICU4               --- --------------ANAC81----------->RAV1(1) --------->YAB1         --------->AHL20(2)            <------   tttttttgtttttctttactagacaacaaaatttggaccttaatcacatcatcttttcaccgaaatataaatcatcatacatgttaaaactatattttga  7259600                                                       <------MYB46(1)              <------MYB83                      --------->AHL20(2)              <------MYB46(1)              <---------AHL20(2)       <-------GAMYB                      --------->AHL20(2) ------------------------ANAC81           <---------AHL20(2)                                 <------- ------->AHL20(2)                  ----------->GT1     <------MYB83                          -------- --------AHL20(2)                 ----------->GT1 <---------AHL20(2)         <---------ARR11(3) ------>AHL20(2)    --------->AHL20(2)    --------->AHL20(1)                 --------->ARR11(3) ---YAB1<---------MYB52(1)      ---------->DOF2 <---------AHL20(2)       ---------->DOF2   ----------   tttaattttcgttgtttggtttttatatagtttcaaaagttaaatttaatataaatttggttttgcagagaaattgaaagatgtttgataccaaaaagaa  7259700                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                             --------->AHL20(1)                                                             <---------AHL20(1)                                                            --------->AHL20(2)    ----------->GT1     --------->DAG2                      <---------ATHB12 ---ID1                ---------->DOF2                  --------->AHL20(2)            -------->P --->GT1           --------->AHL20(2)               --------->ICU4               --------->DAG2    -- >DOF2        <-------TEIL                     ----------->GT1                 ---------->DOF2     --   aaacaattgtgaaaaatgcattaaaaaaagtttttctaattttaagaagaagtaaaaattcaataaattagttttaaaaaaaaaaggcaacctcttgtac  7259800  Previous    Next  AGI:  At5g21960.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF016 (ERF016) [Arabidopsis Thaliana] (GB:Q9C591); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G19210.1); similar to RAP2-like protein [Populus trichocarpa] (GB:ABQ62997.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 7258366    to: 7259311    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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