Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ANAC58               --------->YAB1                --------->ANAC58           --------->KAN1   --------->MYB52(1)                    ---       <---------RVE1(2)             <----------DOF2    <------ZmHOX2a(1)                       -----       --------->GATA12        --------->RVE1(2)   --------->RVE1(2)                   <---------TOE1(3)       <---------GATA12  <-----------GT1  <---------RVE1(2)<---------KAN1              <---------TOE2(3)   gtgagtgtcgatttggacaagcctatgttaccatctcaactttgcatattcaaaatcaggaataactgaaacagcttgagagcatacttaaggctagaga  6942500                                                              <---------AHL12(1)                                                              --------->AHL12(1)                                                              --------->AHL25(3)                                                              <---------AHL12(3)                                                              <---------AHL25(3)                                                              <---------AHL25(2)                                                              <---------AHL25(1)                                                              --------->AHL25(1)                                                              --------->AHL25(2)                                                 --------------->AGL15                                            --------->At4g35610  <---------YAB5                                            <---------At4g35610<---------AHL25(3)                                        <---------ALFIN1      <---------AHL20(2)                                  <---------ARR11(3)          --------->AHL20(2)                                  --------->ARR11(3)          --------->AHL20(1)                                  --------->GLK1(2)          <---------AHL25(2)                                 --------->CCA1(1)           --------->AHL25(1)                                --------->AHL12(1)    --------->DOF5.7(1) --------->WOX13(2)                           ----------->GT1 <---------GATA12  --------->AHL25(3)          -------->P      --------->HSFB2a(2)    ====================================================    --------->DAG2        <---------HSFB2a(2)    <---------------AGL15    <---------WOX13(2)   ---------->DOF2       <---------ANAC46  --------->GATA12  <---------AHL12(3)            <---------YAB5   --------->DOF5.7(1)   <---------ANAC58  --------->ARR14(2)--------->AHL12(2)          --------->YAB1 -------->GT1            <---------ANAC58  <---------ARR14(2)--------->AHL20(2)   <-----------ARR10 ------>GT1     <-----------HVH21--------->RVE1(1)    ---------->DOF2    --------->KAN1 <---------YAB5   gagaaaaaagctaaccagggtcgcattgctggaaaaaatcttccacatctgcaaaaaaaagaaattaattgttcttaattcgaagaactaagcatcatca  6942600                                                            ------>ZmHOX2a(2)                                                      ------>MYB83                                                      --------->MYB52(1)                                                      ------>MYB46(1)                                                     --------->MYB55(1)                                                    --------->MYB46(3)                                                    <---------MYB111(1)                                                    --------->AtMYB61                                                    <---------MYB111(2)                                                    <---------MYB46(2)                                                    <---------MYB52(2)                                                   --------->ANAC58                                                 --------->RAP2.6(2)                                      ----------------->AGL3--------->YAB1                                      ===============================================================                 <---------ZAT18 --------->DOF5.7(1)<---------MYB55(2)              <---------KAN1                 --------->ZAT18--------->DAG2--------->ANAC58                  --------->ANAC46              ---------->DOF2   --------->DOF5.7(1)--------->ANAC58             --------->ANAC58          --------->ZAT6       --------->DOF5.7(1)------>NtERF2          --------->GLK1(1)     --------->TOE2(3)         ---------->DOF2--------->ANAC58           <---------GLK1(1)  --------->RVE1(2)     <---------MYB46(3)  ---------->DOF2<------ZmHOX2a(2)    --------->ANAC58 =======================================================MADS_MADS<---------YAB1--------->LBD16   acacaatccataacactagagcacaattgttgaaaaagggtctaaataaagccaccaaacgatcgtcatgagaagaattcccacgaaaaactcaaaaccc  6942700                           --------->DOF5.7(1)                         ---------->DOF2                      --------->ANAC58                      --------->ANAC58                                       --------->ANAC46                      ------------------------>ANAC81                        <---------DEAR3(1)                     --------->DAG2                                    --------->At4g35610               <----------DOF2                                         <---------At4g35610               --------->TOE1(3)                                       <---------ZAT2         -------               --------------->AGL15                    <---------ZAT2 --------->ZAT2   <---------ARR11(3)               <---------------AGL15            --------->ALFIN1  <---------bZIP60(1)   --------->GATA12               --------->TOE2(3)  ---------->DOF2<---------MYB46(3)   ------>NtERF2     --------->ARR11(3)   ---------->DOF2  ---------->DOF2 --------->DOF5.7(1)--------->ARR11(3)   --------->RAP2.6(3) ==============================MADS_MADS   <<<<<<<<<<<<<<<<<LFY --------->YAB5------>NtERF2<---------HSFB2a(2)   ataagaaaagtttcaaactttaaaaagcaaagagaagaaagaagagaccagtggtgagagcttggatgatgccagctcgacggcccttaaaatctcgaaa  6942800                                --------->ARR14(2)                                --------->ARR11(2)                                <---------ARR14(2)                                <---------ARR11(2)                               --------->GLK1(1)                              ----------->ARR10                          ---------->DOF2                            --------->ZAT18                            <---------YAB1                            <---------ZAT18                      --------->ARR11(2)                          --------->ZAT18                        <---------ARR11(2)                          <---------ZAT18                        <---------ARR14(2)             <----                          --------->ZAT14                        --------->ARR14(2)            <-----                     <---------ZAT14   ------>ZmHOX2a(1)     <---------LBD16                  <------     ----------->HVH21    <---------ZAT14         <---------CCA1(2)  --------->YAB5        <---------ANAC58 --------->KAN1      --------->ZAT14 <---------DOF5.7(1) ------>ZmHOX2a(1)                 <---------ANAC58 --->DOF2           <----------DOF2 ------>ZmHOX2a(1)  <-----------------AGL1       <---------TOE2(3)   gacttcttcgacagttcgagggctgtagtgcgcagttcctccttccatgtccgtctctcctctctcggaaacgatgaaagaacagtgaggtttgcttctt  6942900                                                                                      -------->P                                                                                      ------>MYB46(1)                                                                                      ------>MYB83                                                                          ----------->HVH21                                                                          --------->REM1(2)                                                                          --------->ETT(2)                                                                          <---------ETT(2)                                                                        <-------PIF5--------->MYB46(3)                                                                        --------->LBD16                                                                        ------->PIF5----------->HVH21                                              --------->TOE2(3)        <---------O2 <---------MYB59       ---------->DOF2      --------->ANAC55(2)                        <---------ANAC46   --------->LBD16 -----DOF5.7(1) <---------KAN1      ----------->GT1           --------->DAG2        --------->DEAR3(1) -----DOF2*TSS  --------->AHL12(1) --------->DAG2            ---------->DOF2    ----------->HVH21 <-- ---DOF5.7(1) <---------GLK1(2)   ---------->DOF2---------->DOF2       --------->O2--------->DEAR3(2)   ttttttttctaaagcagaatttttgttcttaagtgataaagtaagaaaacttaatgcagactaaaaagttgccccgtggacagtgaccgacccggtctag  6943000                         <---------ANAC55(2)                        <-------TEIL                               <---------ANAC46                   --------->AHL12(3)                              <---------ANAC58                   --------->AHL20(2)                              <------MYB83                   --------->AHL25(2)                              <---------ANAC58                   --------->AHL20(3)                     <----------DOF2                   <---------AHL12(3)                    <---------ANAC46                   <---------AHL20(3)                    <---------ANAC58                  <---------AHL25(3)         <---------ICU4        <------MYB46(1)                  --------->YAB1             --------->YAB1       <---------AtMYB61                 --------->AHL20(2)       --------->YAB1 <---------ANAC58           <---------AHL20(2)   --------->MYB52(1)      <---------TOE1(2)           --------->AHL20(2)  <---------AHL20(2)    <---------ANAC58         --------->WOX13(2)    <---------ATHB51      <---------ANAC58<---------ZAT6         <---------WOX13(2)  --------->AHL12(2) --------->ARR11(3)--------->MYB111(2) ---------GT1  --------->YAB1--------->YAB1<---------AHL12(2)     --------->MYB46(2)   --------->YAB1   tcacaacacttatttaaaaataaaaatacataaataatggacattaataatgtcttcgtgcgtttagtttggtgttatctcattttcaaacataatcaag  6943100                                                  --------->ANAC58                                       <---------YAB1                                    <---------YAB1<---------ANAC55(2)                                   --------->AHL20(3)                                   <---------AHL25(2)                                   <---------AHL12(2)      <---------ALFIN1                                   --------->AHL25(2)   <---------ICU4                                   --------->AHL20(1)   --------->YAB1                                   <---------AHL20(3)  <---------YAB5            <-----------GT1    <------NtERF2                 <---------ICU4  --------->ANAC55(1)       --------->YAB1         <-    ----------->GT1               --------->AHL12(1)--------->TGA2(2)      <---------YAB5          <-   --------->HSFB2a(2)           --------->ICU4   --------->ANAC58       --------->YAB1            <-   <---------HSFB2a(2)          --------->AHL12(3)--------->ANAC46      <---------AHL20(2)      <----  --------->ETT(1)              --------->AHL12(2)--------->ANAC55(2) --------->CCA1(2)       <------  <---------ANAC46       --------->GLK1(1) ----------->HVH21         --------->ARR11(3)    <---------DOF5.7(1)  <---------LBD16       <---------GATA12  <---------WOX13(1)         <---------ARR11(3)   <----------DOF2   tttgtcgggaaaaaaactactctacagatttcataaatattatgaatgacagacgtaatcaacacattcaagatataatcatataaccatgtcttttttc  6943200                                                                                   <---------AHL12(2)                                                                                 --------->AHL25(2)                                                                    ----------->RAV1(1)                                --------->LBD16     <---------At4g35610          --------->AHL25(1)                          <---------YAB5            --------->At4g35610          --------->AHL20(2)                  --------->ANAC58  <------ZmHOX2a(1)             ------>MYB83   <---------AHL20(3)        <---------ATHB12 <---------ARR11(3)      <------ZmHOX2a(2)------>MYB46(1)--------->AHL12(3)        <---------YAB5   --------->ARR11(3)   <---------YAB1     ----------->RAV1(1)      --------->WOX13(1)--------->YAB1       <-----------------------TaNAC69(2)  --------->AHL20(3) --------DAG2     <xxxxxxxxxxxxxxxxxxsmallRNA(se3)==============================RAV--------->AHL12(2) ---------DOF2  ---------->DOF2<---------HSFB2a(2)===========================RAV--------->AHL12(2)--- --------DOF5.7(1)--------->ANAC58  ====================HOX2a_HOX2a--------->MYB46(3)           ----- -------GT1--------->At4g35610 --------->HSFB2a(2)<-----------RAV1(2)      ----------->GT1      ----- -----GT1--------->YAB1--------->ICU4       <-----------GT1     --------->AtMYB61<---------AHL12(3)   acttttctcaatcatctacaaagccatgatcatccagaggaaatagttacgatcagatgagaaacaccaacaacaattggaaaaaaaataacccaaaaaa  6943300                                                                   --------->At4g35610                                                               <---------ARR11(2)                              --------->YAB5                   --------->ARR11(2)         <---------ARR11(3)                           <---------At4g35610                 <---------ARR14(2)         --------->ARR11(3)                           --------->At4g35610                 --------->ARR14(2)         <----------                          <---------GATA12        --------->RVE1(2)<---------At4g35610    --------->RVE1(2)                          ------->TEIL  --------->ZAT6    <---------ZAT2                 <---------KAN1 ------>DOF5.7(1)       <-------TEIL<---------ANAC58      --------->STY1(2)       ------>ZmHOX2a(1) ---->DOF5.7(1)  --------->ANAC58   <---------ANAC58      --------->ZAT2  ---------->DOF2<---------CCA1(2) ----->DOF2      --------->ANAC58  --------->At4g35610    <---------STY1(2)   --------->ARR11(3)   aagaaggaaaactgagacgaagcaaatgcatctgattagcttacacttgccatctccactagctggttctgcttacaaaagttcctgtccaatatctcac  6943400  Previous    Next  AGI:  At5g20510.1    Description:  PHD finger family protein. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT3G42790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45651.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 6939815    to: 6942910    Orientation: Reverse Links:  TAIR  MIPS  AIP    AGI:  At5g20520.1    Description:  WAV2 (WAVY GROWTH 2). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13610.1); similar to unknown [Populus trichocarpa] (GB:ABK94077.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 6943156    to: 6946456    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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