Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ANAC58        <-------TEIL -----NtERF2 --------->RAV1(2) --->NtERF2 -------RAP2.3(1) ------PCF2 ------RAP2.6(2) ------RAP2.3(2) ------ANAC58 ------ANAC46 ------ANAC58 ---->ATERF1(1) ---->RAP2.3(1) --NtERF2--------->ANAC55(2)                                    --------->ZAT2 ----RAP2.3(1)                                    --------->ZAT18 ----ERF1<---------ANAC58                 --------->WOX13(1)    --------->At4g35610 ----ATERF1(1)                        <---------ETT(2)          <---------ZAT2              --------- ---RRTF1(3)                    <---------ALFIN1 --------->DOF5.7(2)      ---------->DOF2--------->AtLEC2 -->ALFIN1                      --------->DEAR3(1)<-------TEIL  <---------At4g35610      --------->ANAC58 ---DEAR3(1)       --------->At4g35610--------->ETT(2)   --------->ARR14(2)              --------->ANAC58 ---RAP2.3(3)      --------->ZAT2   --------->LBD16      <---------ARR14(2)    --------->ZAT18 --RAV1(1)<-----------HVH21  <---------ALFIN1--------->YAB1  ------>ZmHOX2a(1)<-----------HVH21   cgcctgtagatgcgtcataagagctggaacagcacctccgtcgacaatcacgttcactaaatcctctgctgaacatcaaaggtcactagtcatgcaacaa  6512400                                                           <---------ZAT2                                                           --------->ZAT2                                                           <---------At4g35610                -------                                             <---------At5g28300                    <---------ANAC58                                            <-----------GT1--------->At4g35610      <---------ANAC58                                   <---------At4g35610  <---------ANAC58        <---------ANAC58    <                  --------->DAG2   <---------ZAT2<---------MYB52(1)             <---------ANAC58<----                 ---------->DOF2   --------->At4g35610  <---------ANAC58   <---------ANAC58<------NtERF2           --------->LBD16    ------>ZmHOX2a(2)--------------->AGL15       <---------ANAC58--------->At4g35610         <---------LBD16     <------ZmHOX2a(2)<-----------------AGL1      --------->ATHB12 --------->ZAT2        --------->MYB52(1)  <---------ARR14(2)<-----------------AG   <---------ARR14(2)    <---------At4g35610 -->RAV1(1)----------->GT1  --------->ARR14(2)<-----------------AGL3 --------->ARR14(2)    <---------ZAT2   aatatgaagaaaccggagaaaaaggagtaagatcggaagctgattttcaccgtttttggctagctcagccagaacttgagtggctcgcttggcagcagcg  6512500                                                                                                <----                                                                                               <-----                                                                                          <------NtERF2                                                                                         ------>NtERF2                                                                                        <---------ATERF1(2)                                                                                        <---------bZIP60(1)                                                                                        --------->bZIP60(1)                                                                                        --------->ATERF1(2)                                                                                       --------->RAP2.6(3)                                                                                      --------->MYB52(1)                                                                                     ----------->HVH21                                                                                     ----------->TGA1                                                                                   --------->ZAT2====                                                                                   <---------At4g35610                                                                                   --------->ABI4(2)                                                                                   --------->At4g35610                                                                                   <---------ZAT2<---                                                                                <---------DEAR3(2)                                                                               <---------DREB2C(2)---                                                                               <---------MYB46(3)----                                                <---------At4g35610            <---------At1g77200=== ------>ZmHOX2a(2)                              --------->At4g35610            <---------DEAR3(1)<--- -->At4g35610                <---------------AtSPL8-------->P---------->DOF2  <---------MYB52(1)----- ------ZmHOX2a(2)           <---------ZAT14  <---------At4g35610             <-----------HVH21 ------ -----ZAT18             <------NtERF2        --------->At4g35610          <---------ATERF1(1)<------NtERF2   cgatcggactcttgccaagagaaggcagagtttagtaccgagacttgagcagcaacctcgctaagaagcgcttggcctccgtcggtgctgacggcagaga  6512600                     <---------ARR14(2)                     --------->ARR14(2)                    <------NtERF2                    --------->ATERF1(1)                    <---------At4g35610                   <---------RRTF1(1)                   <---------RAP2.6(1)                   <---------ATERF1(1)                   ------>NtERF2                   <---------MYB46(3)                   --------->ABI4(2)                   <---------DEAR3(2)                   <---------DEAR4(2)                   <---------ORA47(2)                   <---------RAP2.3(1)                   <---------ERF1                  <---------RAP2.3(2)                  <---------RAP2.3(3)                  <---------RAP2.6(2)                  --------->DEAR3(1)                  <---------DEAR3(1)                 --------->ATERF1(1)                 <------NtERF2                 --------->DREB2C(1)                 --------->RAP2.3(1)                 <---------DREB2C(1)                 --------->DEAR4(2)                 <---------At4g35610                <---------RRTF1(1)                <---------RAP2.6(1)                <---------ATERF1(1)                ------>NtERF2                <---------DEAR4(2)                <---------ORA47(2)                <---------RAP2.3(1)                <---------ERF1               <---------RRTF1(2)               <---------RAP2.6(2)               <---------ATERF1(2)               --------->DEAR3(1)               <---------DREB2C(2)             <---------RAP2.3(1)           <---------LBD16      <------------------SPL14      ==============================HOX2a_HOX2a      ==========================HOX2a_HOX2a      ------>ZmHOX2a(2)    --------->ARR11(3)    <---------ARR11(3)                                                                       <------MYB46(1)    <---------ARR14(2)   ------>ZmHOX2a(1)                                                   <------MYB83    --------->ARR14(2)------>NtERF2                                                       <-------GAMYB -----ARR11(3) <---------DEAR3(1)                                                        --------->MYB52(2) ----GLK1(1)<---------DEAR3(1)                                                           --------->MYB111(2) ===============================HOX2a_HOX2a                           ------>NtERF2      --------->MYB55(2) ------GLK1(1) <---------RAP2.3(2)                         --------->LBD16               <---------MYB46(3) --->ZmHOX2a(2)<---------RAP2.3(3)                        <---------HSFB2a(2)           <---------MYB55(1) ----->GLK1(1) <---------RRTF1(3)      <---------At4g35610--------->HSFB2a(2)           <--------P ===============================HOX2a_HOX2a      <----------DOF2     --------->LBD16   <---------MYB52(1) ---ZmHOX2a(2)<---------ABI4(1)   <---------ANAC58       <---------LBD16               <-------GAMYB ---->ARR11(3)--------->ATERF1(1) <---------ANAC58   --------->ANAC46------>NtERF2    --------->LBD16 --->GLK1(1)--------->ANAC46 ------>ZmHOX2a(1)   ------>ZmHOX2a(1) <---------LBD16  <---------LBD16   tctctcgatcttctacggcggcggctccttcctctagcttccgcttctgtcctttacgctccggaaaactccggccttctcgcctctccggttgttggtc  6512700                                     <---------GLK1(1)                                 <------ZmHOX2a(1)                        --------->LBD16                      ==================HOX2a_HOX2a                     <------ZmHOX2a(2)                     ===================HOX2a_HOX2a                                          <-------                    --------->ARR14(2)             >>>>>>>>>TBF1        --------->WOX13(1)  <------ZmHOX2a(2)                    <---------ARR14(2)          >>>>>>>>>TBF1         ------------>CBF     --------->ARR11(3)             ---------->DOF2     =============HOX2a_HOX2a   *TSS      <---------ATHB12    <---------GLK1(1)       ---------->DOF2------>ZmHOX2a(2)<------ZmHOX2a(2)--------->At4g35610          ---------->DOF2   catcgttcacaaagtaaaagacgatccgaagaagaggagagatcagagaagaagaagaagcagcgttttgaaatcaatctcaggcacaaaagagatcagg  6512800                                                  <---------AHL20(2)                                                 <---------YAB1                                           <---------AHL20(1)                                           <---------AHL20(2)                     ----------->GT1                                           --------->AHL20(2)                   ---------->DOF2       <---------MYB52(1)            <----------DOF2                     ----------->GT1   <-----------GT1          --------->AHL20(2)<---------YAB1         <---------AHL20(2)         <---- ----RAV1(2)<---------AHL20(2)  <-----------GT1 <---------AHL20(2)  --------->AHL20(2)  <----------ID1   ggtattttcgttatttcattcgactcacaaataaaaaccctttattttatttttattttgtatttctagtttaaattgtaagaaaagaaaaaaacaaatt  6512900                                       <---------YAB1                                    <---------YAB1                                              <----                                <----------DOF2            --------->ATHB51      <---------ANAC46                               ------>ZmHOX2a(2)          <---------AHL20(2)    ---------->ID1 >>>>>>                             <---------ARR11(3)           <---------YAB1 --------->AHL20(2)   ------- ---TEIL                     --------->ARR11(3)       ----------->GT1    <---------AHL20(2)  <-------   cgtacttgggattagagtattagacataaatgatctttcttattaatgtccaaagaatgtataattgaaacgtttttaatttttcgtttacatttttgat  6513000                                                <---------AHL20(1)                                             --------->AHL20(2)                                           --------->AHL20(2)                                           <---------AHL20(2)                                         --------->AHL20(2)                                         <---------AHL20(2)                                       <---------AHL20(2)                                       --------->AHL20(2)                                     <---------AHL20(2)                                     --------->AHL20(2)                                   <---------AHL20(2)                                               <                                   --------->AHL20(2)                                              <-    --------->AHL20(1)           <---------AHL20(2)                                                <-    --------->ARR11(3)           --------->AHL20(2)                                                --    <---------AHL20(1)         <---------AHL20(2)                                                  <- --------->AHL20(2)            --------->AHL20(2)                                      <---------At4g35610 -----WOX13(1)               --------->AHL20(2) --------->ARR11(3)                    <---------ANAC58 >>>ARR2                    <---------AHL20(1)  --------->AHL20(1)                    <---------ANAC58 -->ATHB12                  --------->AHL20(1) <---------AHL20(2)           <---------ZAT6      <---- --YAB1                    --------->AHL20(2)<---------AHL20(2)      ----------->RAV1(1)    ------>ZmHOX2a(1)   tgtttatatattgaaatgtttttagacaaatatatatatatatatatatatatattgaaatgtttttctagcgacatagtgctaatttgcgctcctcact  6513100                              --------->ARR14(2)                              <---------ARR14(2)       --------->ARR14(2)   --------->LBD16       <---------ARR14(2)  <---------HSFB2a(2)      <---------RAP2.6(3)  --------->HSFB2a(2)    <------NtERF2         ----------------->AGL1   ------>NtERF2          <---------LBD16  <---------PCF2         --------->SPL7 --------->AHL20(1)           --------->ZAT18 --------->ATERF1(1)     --------->MYB52(1)                          --------->ZAT14 ---------MYB46(3)     <---------SPL7   --------->ARR11(3)           <---------ZAT14 ----------RAV1(1)    <---------ANAC58  <---------ARR11(3)           <---------ZAT18 --------DEAR3(1)     <---------ANAC58----------->ARR10  --------->ZAT2 ------->ALFIN1      <---------------AtSPL3              <---------ZAT2    <---------AHL20(2) --------AtMYB61     --------------->AtSPL3      <---------ALFIN1--------->ALFIN1   --------->MYB46(3) -------RAV1(1)     <---------ANAC46---------->DOF2    <---------ALFIN1    <---------YAB1         <--   ggtggtgccgatttgctaacttgggcgtaccggaactgaaaagatattgtcccactcccacctcgaggttgtgcagttttattgcaacaactaaaaactt  6513200                                                                                                   --                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ====                                                                                         ============                                                 --------->ANAC55(2)                     ---------->DOF2                           <------MYB46(1)       <---------ANAC55(2)           <------MYB46(1)   <---                           <------MYB83      --------->YAB1                    <------MYB83      ----                   <--------HAHB4          --------->AHL20(2)                  <---------MYB46(3)<---                   --------->ATHB51       --------->AHL20(2)                <---------ANAC46     <---                   <---------ICU4         --------->YAB1                    <---------ANAC58     ----                   --------->ATHB12    --------->YAB1                       <---------ANAC58     ====                  --------->ICU4      --------->ICU4                       <---------MYB46(3)    ====                  <---------YAB1      <---------YAB1                   <----------DOF2----------->RAV1(1)                --------->YAB1      --------->YAB1             ======================================      ----------->GT1<---------YAB1<---------ATHB12            <----------DOF2<---------AtMYB61  <--- -------YAB1    <---------ICU4     <---------ATHB51    --------->YAB1  ==============================   attgttgatggtttatagtcattattagttggtatcaataataataaaaataagtaatagtaaggcttttgaacttttgggtggtctgccacaaaggaga  6513300  Previous    Next  AGI:  At5g19330.1    Description:  armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein. similar to armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G13060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75981.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22522.1); similar to hypothetical protein OsI_019192 [Oryza sativa (indica cultivar-group)] (GB:EAY97959.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains Inte Range:  from: 6507796    to: 6512760    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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