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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
<---------
GLK1(2)
--------->
ANAC46
--------->
ANAC58
<-------
TEIL
----------->
RAV1(2)
--------->
ANAC58
<---------
ARR14(2)
<---------
GLK1(2)
<-
---->
ARR14(2)
--------->
ANAC58
--------->
ARR14(2)
--------->
ARR14(2)
<-----
-----
ARR14(2)
--------->
CCA1(2)
<--------------
OsCBT
<---------
ARR14(2)
<-----
---->
GLK1(2)
---------->
DOF2
--------->
ANAC58
<----------
ID1
<----------
DOF2
----
tccatcgcctgattctctatgtttcaaagagaaacgcgaaacgcattcgaaggaaacgcgatgaatagcgaccagattcat
cgcttttgtttgtgtttcg
5529900
<
<-
<-
<-
<------
-------
<------
-------
<------
<------
<------
ZmHOX2a(1)
=======
--------->
LBD16
-------
<---------
LBD16
---------->
DOF2
<------
--------->
HSFB2a(2)
===========================
<----------
DOF2
<----------
DOF2
<-----------
HVH21
<------
ZmHOX2a(1)
<------
--------
DEAR3(2)
<---------
HSFB2a(2)
--------->
LBD16
<------
----
ANAC58
<---------
ANAC58
<---------
ZAT6
<-----------
RAV1(2)
<------
----
ANAC58
<---------
ANAC58
*
TSS
--------->
CCA1(2)
<---------
ANAC58
------>
ID1
<-----------
GT1
<-----------
GT1
--------->
CCA1(2)
<---------
ANAC58
tcgcttcacttcaaattactttccaggatttaa
cgagtgtcagtgtcagtataagagagagagagataagagccaggaaagttttctctgtgtcttacgt
5530000
--------->
AHL20(2)
----------
DOF2
--------
ANAC46
--------
ANAC58
--------
ANAC58
---
O2
-->
O2
---
ANAC58
<-----------
GT1
--------
-->
TGA1a
--------->
YAB1
--------->
MYB52(1)
<-------
---
ANAC58
--------->
ANAC46
<---------
ANAC58
<---------
AHL20(2)
--------
---
ANAC55(1)
<---------
ANAC58
--------->
AHL20(2)
--------
==========
bZIP_DOF
<---------
AHL20(2)
--------->
ARR11(3)
<---------
AHL20(2)
<-------
-->
ANAC55(2)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(1)
--------
---
ANAC55(2)
--------->
AHL20(2)
>>>>>>>>>
GATA-1
--------->
YAB1
<---------
At5g28300
===
bZIP_DOF
<---------
AHL20(2)
<---------
ANAC46
--------->
TOE2(3)
========
---
TGA1a
<-------
TEIL
<---------
YAB1
----------->
GT1
--------->
GLK1(2)
<---------
ANAC46
-
---
bZIP60(2)
<---------
ICU4
--------->
SPL7
--------->
RVE1(1)
--------->
AHL20(2)
--------
---
ANAC46
--------->
ANAC55(2)
--------->
TOE1(2)
--------->
CCA1(1)
<---------
AHL20(2)
<-------
ggcttttaatatacataattaaatgatataatcgtgcgtcgtatagataaatatctgagataatcttattaaattttaacggtgtatattatgccacgta
5530100
->
ANAC58
--
TGA1a
->
O2
------->
TEIL
--
->
TGA1a
<---------
ANAC55(2)
--------->
ANAC46
--
O2
<---------
ANAC55(1)
--------->
ANAC58
->
ANAC58
--------->
O2
<-----------
GT1
--------->
YAB1
<-
===============================
bZIP_DOF
<---------
ANAC58
<---------
ATHB12
------
------>
TEIL
--------->
At4g35610
<----------
DOF2
------>
MYB46(1)
<--------
->
ANAC55(2)
--------->
DAG2
<---------
ANAC58
------>
MYB83
--------->
ANAC55(1)
--
ANAC55(2)
---------->
DOF2
<---------
ANAC46
<---------
AHL20(2)
--------->
ANAC58
tgaaactcaccgagaaaaacagaaaaagctgctatcgatgctacgtgtacttttaaaccgaattaatccgaaccaaatcaaaatacacgaaatgaaaccg
5530200
--------->
ANAC55(2)
<------------
CBF
<---------
At4g35610
------>
MYB46(1)
<---------
At4g35610
<---------
TOE2(3)
------>
MYB83
<----------
DOF2
-
------->
AHL20(2)
--------->
MYB52(1)
*
TSS
<---------
DAG2
<-----
--------
AHL20(2)
<---------
MYB59
<---------
ANAC58
<-----
----->
GT1
--------------->
AtSPL3
<-----------------
AGL1
--------->
At4g35610
---
GT1
----------->
HVH21
--------->
AtMYB61
--------->
MYB52(1)
<---------
ANAC58
<---------
tttaatttaggtgacagtcagagtgtctaccaaaactaatcgtacaaaaccgaactgaattgaaccgaaatggcc
atgcctgcttttcttcagctttaag
5530300
---
<----
-------
<------
ZmHOX2a(2)
<---------
ARR11(3)
<------
ZmHOX2a(1)
===========
--------->
LBD16
<------
ZmHOX2a(2)
<---------
RVE1(1)
<---------
HSFB2a(2)
<---------
ARR11(3)
<---------
CCA1(1)
--------->
HSFB2a(2)
--------->
ARR11(3)
<---------
AHL20(1)
<---------
LBD16
--------->
DOF2
--------->
AHL20(1)
<---------
HSFC1(2)
----
TOE2(3)
--------->
ARR11(3)
--------->
HSFB2a(1)
----
TOE1(3)
<---------
ALFIN1
<---------
ARR11(3)
<---------
HSFB2a(1)
-
DOF2
--------->
ATHB12
---------->
DOF2
--------->
HSFC1(2)
<
ggaaaagatcaaagattgggtcttcaacacttgagagagtctctgtctctgtaaaagatatttgagcttgagaagaacagaagaaacttccaggatcaat
5530400
--------->
SPL7
<---------
SPL7
<---------
ANAC55(2)
<---------
ANAC58
--------->
ANAC55(2)
<---------
ANAC58
<---------
ZAT14
--------------->
AtSPL3
<---------
ZAT18
--------->
GLK1(2)
<----------
DOF2
--------->
ARR14(2)
--------->
TOE2(3)
<---------
ARR14(2)
<------
ZmHOX2a(2)
--------->
LBD16
<
------>
WOX13(1)
<---------
HSFB2a(2)
<--------
-----
ATHB12
--------->
ZAT14
--------->
HSFB2a(2)
--------->
ARR14(2)
-->
WOX13(1)
--------->
ZAT18
<-----------------
AGL1
<---------
ARR14(2)
==========
HOX2a_HOX2a
--------->
ARR14(2)
--------->
DEAR3(1)
-
---------
ATHB12
<---------
MYB59
<---------
ARR14(2)
--------->
DEAR3(1)
--------->
DEAR3(1)
caatcgatcaactttagtgaactaactcttgatttttcattcgaagtt
atggaatcggttcccgaatccgtaccatcgccgaactcgaatacaccgtcaa
5530500
--------------->
AtSPL8
<---------
GLK1(1)
--------->
GLK1(1)
<---------
ZAT14
--------->
ZAT14
---------
--------->
LBD16
<---------
ANAC46
<---------
DEAR3(1)
--------->
At4g35610
--------->
DEAR3(1)
<---------
ANAC58
<---------
LBD16
--------->
ATERF1(2)
<---------
ANAC58
<---------
WRKY18(1)
--------->
ATERF1(1)
--------->
ABI4(1)
<---------
DAG2
<---------
MYB46(3)
<---------
ATHB12
<---------
At4g35610
------>
NtERF2
<----------
DOF2
--------->
ANAC58
--------->
WRKY12
--------->
At4g35610
--------->
DEAR3(1)
--------->
DEAR3(1)
--------->
ANAC58
--------->
WRKY45
<---------
ZAT2
--------->
DREB2C(2)
------>
NtERF2
----------->
HVH21
--------->
WRKY38(1)
--------->
ZAT2
------->
GAMYB
<---------
SPL1(1)
--------->
ANAC46
----------->
HVH21
<---------
LBD16
<---------
ALFIN1
--------->
SPL7
------>
MYB83
<---------
MYB52(1)
<---------
ANAC58
--------->
MYB46(3)
--------->
DEAR3(2)
------>
MYB46(1)
------>
ZmHOX2a(2)
<---------
ANAC46
---------
ALFIN1
<---------
SPL1(2)
--------->
TOE1(2)
<---------
ARR14(2)
<---------
MYB52(1)
===
---
HVH21
<---------
ZAT18
<----------
DOF2
--------->
TOE2(2)
--------->
ARR14(2)
<---------
DEAR3(2)
---
-------->
AtMYB61
<---------
SPL7
----------->
GT1
<--------
P
--------->
At4g35610
<---------
ANAC58
----
taccaccgccggtgaactccgtaccgcctttcttgagtaaaacctacgacatggttgatgatccgttgaccaatgaggtcgtttcgtggagcagcgggaa
5530600
<---------
HSFB2a(2)
--------->
HSFC1(1)
<---------
ZAT14
<---------
HSFC1(1)
<-------
GAMYB
----------->
RAV1(2)
--------->
HSFB2a(2)
<-----------
TGA1
<-------
TEIL
--------->
GLK1(1)
<-----------
HVH21
<---------
GLK1(2)
--------->
LBD16
<-------
TEIL
--------->
ZAT2
<---------
ANAC58
<---------
GLK1(2)
--------->
At4g35610
<---------
LBD16
--------->
At4g35610
>
LBD16
<---------
SPL7
--------->
LBD16
--------->
MYB46(3)
----------->
GT1
======================
RAV
<---------
GLK1(1)
--------->
YAB1
<---------
ZAT2
-------->
RAV1(1)
--------->
ZAT18
--------->
HSFB2a(1)
--------->
ANAC58
--------->
ZAT2
---------
----->
MYB46(3)
<---------
ANAC58
<---------
TOE1(2)
--------->
ANAC58
<---------
At4g35610
caacagcttcgtcgtctggagtgccccggagttctcgaaggtgctcttgcccaagtatttcaagcacaacaacttctccagcttcgtcagacagttaaat
5530700
<---------
HSFB2a(2)
--------->
HSFC1(1)
--------->
HSFB2a(2)
<---------
HSFC1(1)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ANAC46
--------->
YAB1
<---------
AHL20(2)
<---------
ANAC58
--------->
ANAC58
<---------
AHL20(1)
<---------
ANAC58
--------->
ANAC58
--------->
AHL20(1)
<---------
MYB52(1)
----------->
GT1
>
AHL20(2)
<---------
ZAT6
<---------
AHL20(2)
------>
ZmHOX2a(2)
<---------
LBD16
--------->
ICU4
acttat
gtaagcatcattttttgtgttattgtcaatttatttttctagaaattgatcgttttttcgtggtacaatttggggaacatcgtgaaatgttgaa
5530800
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AGI:
At5g16810.1
Description:
ATP binding / protein kinase. similar to unnamed protein product [Vitis vinifera] (GB:CAO62166.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009)
Range:
from: 5526745
to: 5529933
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g16820.1
Description:
HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor. Identical to Heat stress transcription factor A-1b (HSFA1B) [Arabidopsis Thaliana] (GB:O81821;GB:Q9LFD6); similar to ATHSFA1E (Arabidopsis thaliana heat shock transcription factor A1E), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G02990.1); similar to HSF3 DNA-binding domain/VP16 activation domain fusion protein [synthetic construct] (GB:AAN86075.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232)
Range:
from: 5530276
to: 5532795
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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