Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->GLK1(2)                   --------->MYB52(1)                   ---------->DOF2               ------>ZmHOX2a(1)               <---------------AGL15          --------->CCA1(2)                                <-----          <----------DOF2 <---------ARR11(3) --------->ARR14(2)                             <--------       <-----------GT1    --------->ARR11(3) <---------ARR11(3)                            <---------AHL20(2)     <-----------GT1    ----------->ARR10 <---------HSFB2a(2)                      <---------YAB1 <--  <----------DOF2 ------>ZmHOX2a(1)  <----------TaMYB80                 <-----------GT1    --------->AHL20(2)   atctcttttacactttcctcctaaaggagattttgaagtatattcgagatatgaaaaccattaactgaatgaattaacctagtttatgcttaattttata  5402800                                                                     ----------->GT1                                                                  ---------->DOF2                                                               --------->ANAC58                                                               --------->ANAC58                                                           ------->TEIL                                                        --------->ANAC55(1)                                                        --------->ANAC55(2)                    <---------ANAC46                    <---------ANAC55(2)      <---------At4g35610                               --------->ANAC46 ------GT1          <---------ANAC58                   <-------TEIL ----------->GT1 -AHL20(2)  <----------DOF2  --------->YAB1          --------->ARR14(2)                      <-------TEIL --------DOF2       <---------ANAC58                 <---------ARR14(2)                --------->YAB1   ctttcttaagctctctttattttcgtagtatgcataatttagtattttgttcacatatacgtatcaagaaaagataaaaactctataaatgaaaatacat  5402900                                       --------->YAB1                                      <---------YAB1                                    <---------ICU4                                   --------->ICU4                               --------->ANAC46                             --------->ZAT6                            <-------TEIL                            --------->ZAT14                   --------->AHL20(2)--------->AHL20(2)                   <---------AHL20(2)--------->AHL20(1)        ------>ZmHOX2a(2)   --------->ZAT18       <------ZmHOX2a(2) --------->ANAC55(2)                                                  <------      <---------AGP1     <---------ANAC55(2)                                                  <------      <---------ARR14(2)<---------------AtSPL8                                               <-------      --------->ARR14(2)--------------->AtSPL3  <---------DAG2                        --------->ANAC58     <---------CCA1(2)  --------------->AtSPL8  <----------DOF2        ---------->DOF2--------->ANAC58   catgttcggatctaaaattgttttaatacgtacactaaatattataagccctttttttgttaacaaaaaaaaaaaaagaataaatgaaacgaaattcagg  5403000                           <---------AHL20(2)                                          ------>ZmHOX2a(1)                       <---------AHL20(2)                                             --------->ANAC46                   <---------YAB1                                         <---------AHL20(2)          --------->AHL20(2)       --------->YAB1                         <---------ATHB51          <---------AHL20(2)      --------->ICU4        --------->YAB1 <---------AHL20(2)    <------ZmHOX2a(2) --------->ICU4 <---------YAB1  ------>MYB83      <---------AHL20(1)   <---------ARR11(3) <---------YAB1<---------ARR11(3) <---------ATHB12--------->AHL20(2) ---TOE2(3)      ----------->GT1  <---------YAB1     ------>MYB46(1)   --------->AHL20(1)       <---- ---TOE1(3)  --------->ARR11(3) --------->YAB1    ----------------->AG--------->AHL20(2)        ----- ----RAV1(2) <---------ARR11(3)<-------TEIL      -------->P<------ZmHOX2a(1) <---------YAB1 ------->GAMYB   ttagagatcaaataaaatcttgttattatttgattcatgatcatacatactaaccaaatcaggatttatgaaataaattattctttctcctcaaccgaat  5403100                                                         <----------DOF2                                                    --------->GLK1(2)                                                    <---------ARR11(1)                                                    ------->TEIL                                                   <---------ARR14(1)                                                   <---------GLK1(2)              --------->ALFIN1                                                   <---------CCA1(2)            <---------ANAC58                                                 <---------MYB59                <---------ANAC58          ---------->DOF2                     <-----------GT1                   <---------ANAC46   --        --------->CCA1(2)                   <---------ANAC58                  <---------ANAC46     --     ----------->GT1       <----------DOF2  <---------ANAC58        <-----------GT1  <---------ANAC46 -----ATHB12   ----------->GT1    <---------ARR14(2)<---------ARR14(2)     <----------DOF2 *TSS    -- ------->CBF  ----------->GT1     --------->ARR14(2)--------->ARR14(2) <----------DOF2 <------ZmHOX2a(1)   caatatgaagataaaaggggtaatttagtcttttcgaattcgtttttcttaccgaatctctttagttttttttctttcttttgtgtggaggagagaagag  5403200                                                 =============================HOX2a_HOX2a                                                 ------>ZmHOX2a(2)                                               --------->ARR11(3)                                           --------->O2                                           <---------O2       <----------DOF2                     --------->ANAC55(2)       ==============================================bZIP_DOF                                 -------    <---------ALFIN1                       <---------TGA1a                                -------->P  ----------->RAV1(1)                  --------->HSFB2a(2)                            ------>ZmHOX2a(1) ------->ANAC58                        <---------HSFB2a(2)                        --------->ARR14(2) ------->ANAC58              <----------DOF2   <---------ARR11(3)      ------>ZmHOX2a(1)----------->HVH21 ------->ANAC46              ========================bZIP_DOF   --------->ARR11(3)<---------ARR14(2)   aacgcaacactttcttcccaatctctctctgctttctctctctagacgtgatctctaattctctaatgtcttcctgcattgccatttcctctaacccctc  5403300                    ------>ZmHOX2a(1)                                                    <---------YAB1                    --------->LBD16                                               <---------ANAC58                    --------->HSFB2a(2)                           <---------ZAT6  <---------ANAC46                    <---------HSFB2a(2)                   --------->RVE1(1)       <---------ANAC58                   <---------LBD16                       <---------ARR11(3)  <---------ICU4        <------ZmHOX2a(1)                                --------->ARR11(3)  --------->YAB1 -->ANAC46         --------->TOE1(2)                     --------->GLK1(2)  --------->ICU4          -   cacaatcggaggaagacgattcctgggagcaagagaaacgatgggacttcccatcggaaaatctcttagagtgagagaattatggtgtgttcttaatgct  5403400          <---------ALFIN1        <-----------HVH21        ----------->RAV1(1)       --------->ANAC46       ----------->HVH21                                            <----------DOF2       --------->At1g77200                                          <---------DAG2       <---------ETT(1)                                        --------->ANAC58       --------->DEAR3(1)                                      --------->ANAC58       --------->DREB2C(2)                                   ---------->DOF2                   <-----       --------->DEAR4(1)                                 --------->HSFB2a(2)              ---------- <---------ICU4                    <---------AtLEC2      <---------LBD16            <---------ANAC58- --------->YAB1                --------->At4g35610      <---------LBD16  <----------DOF2 --------->MYB46(3) -------->ICU4               <---------ICU4 <---------YAB1<---------HSFB2a(2)       <---------ANAC58-   taataatcaccgacacagccattgttcttcatcatctccatggattttgattccatttctcgggaaagcacttttctttccccattgcttaaccaaagta  5403500                                                                            <---------ANAC58                                                                            <------MYB46(1)                                                                            <---------ANAC58                                                                            <------MYB83                                                                           <------MYB46(1)                                                                           <------MYB83                                                                         <--------P                                              <---------ZAT2            <---------ANAC58        <-----------GT1                       --------->ZAT2            <-------GAMYB   <----------DOF2                            <---------At4g35610       <---------ANAC58   ------>ZmHOX2a(1)                          --------->At4g35610      <---------MYB46(3)  --------->TOE2(3)                       --------->TOE2(3)           <---------AtMYB61 ------GT1                       --------->TOE1(3)               <---------ANAC46 >DOF2 <-----------GT1           --------->YAB1               <---------ANAC46 ----->MYB46(1)                  --------->TOE2(3)       <-----------RAV1(1)<---------ANAC46  <------ ----->MYB83            <---------YAB1    --------->TOE1(3)   --------->ALFIN1  ----------->GT1   ccatcctttattccctctctgatgttctgattcaatcttaaaaacctcagcttgaatttttgttgtggggttttggttgggtttgtgaattttagatgca  5403600                                                              <---------ANAC46                                                             <---------LBD16                                                            --------->MYB52(1)                                                           ----------->HVH21                                                          <-----------TGA1                                                          <-----------HVH21                                                         --------->bZIP60(2)                                                         --------->ANAC58                                                         --------->ANAC58                                    <-------GAMYB       --------->SPL7                                 <---------ANAC58      <---------ARR14(2)                     <---------At4g35610             --------->LBD16                 <---------AHL20(2)                     --------->At4g35610            --------->HSFB2a(2)             --------->AHL20(2)                   <-----------RAV1(2) --------->ATHB12--------->ARR14(2)       --------->ICU4                  <------ZmHOX2a(2)--------->ALFIN1 --------->ANAC46         <---------YAB1     <----            --------->TOE1(2)    <---------ANAC58   <---------HSFB2a(2)  <---------GLK1(2)  <------ZmHOX2a(1) -TEIL    ------->TEIL    <<<<<<<<<<<<<<<<<LFY     <---------LBD16--------->GLK1(1)<---------YAB1   <   atgtggcaaatgaacttgggatcagatgatacaatgggtgttgatgggtcttatccggaacgtcacggagagccagattgtgcttattatataaggactg  5403700  Previous    Next  AGI:  At5g16540.1    Description:  ZFN3 (ZINC FINGER PROTEIN 3); nucleic acid binding. Identical to Zinc finger type domain-containing protein ZFN3 (ZFN3) [Arabidopsis Thaliana] (GB:Q8L7N8;GB:Q8LFU7;GB:Q9XFB9); similar to ZFN1 (ZINC FINGER PROTEIN 1), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G02830.1); similar to hypothetical protein OsI_004824 [Oryza sativa (indica cultivar-group)] (GB:EAY76977.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 5403191    to: 5405157    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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