Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       ----------->GT1 ---YAB1                                          <-----------GT1             --------->YAB1 --AHL20(1)                                       --------->YAB1             <---------TOE2(3) ->AHL20(2)                                    --------->YAB1                <---------YAB1 --AHL20(2)                                   <---------AHL20(2)            <-----------GT1 >YAB1                               --------->ARR14(2)          <---------AHL20(2)   ttctgtgatgttatttcatggaacttcatggacatattgtatatgcatataatcacaacttgctgatttttttaaaattaacataatcaaatgccgaaga  4980100                                          --------->ATHB12                                      <---------ICU4                                      --------->ATHB12                                     <---------YAB1                     <---------MYB52(2)                                     --------->ICU4                    <---------ZAT2                                   -------->HAHB4                      <---------At4g35610                                   --------->YAB1                      --------->ZAT2                                  <---------YAB1                       --------->At4g35610                                 <---------TOE2(3)                <---------SPL7                                --------->YAB1                   <---------ANAC58         <----------DOF2                              --------->AHL20(2)              <-----------RAV1(1)        <---------DAG2              <----------DOF2 <---------AHL20(2)<---------ANAC58 <---------ANAC58        --------->TOE2(3)        <---------GLK1(2)    --------->YAB1     <---------ANAC58 <---------ANAC46     <-----------GT1   --------->MYB52(1)      ------->TEIL <---------WOX13(1) <---------AHL20(2)<----------DOF2   aaaacgaacagaatcactttgtttagatgaattttaatgataattgattcgcttgtgccaatttatgtcgtccagctaacttttaatctaacctttttct  4980200                    --------->ATHB51                    --------->ATHB12                   <---------YAB1                <---------AHL20(1)                      --------->LBD16                --------->AHL20(1)                     --------->ANAC58                   --------->ANAC46                --------->AHL20(2)            <---------ICU4                              --------->ANAC58                <---------AHL20(2)           --------->ICU4  --------->AHL20(2)           --------->ANAC58             <---------AHL20(1)            --------->ANAC46  <---------ATHB51             --------->ANAC55(2)             --------->AHL20(2)       <-----------GT1  --------->ANAC46         <---------ICU4             <---------AHL20(2)     <---------ICU4     --------->ANAC58      --------->ANAC55(2)             --------->AHL20(1)    <---------YAB1<-----------GT1  <-----------GT1  <---------AHL20(2)     --------->GLK1(2)            --------->TOE2(3)   <---------LBD16      --------->AHL20(2)<-------   attggagcatcttaatattttattattgaaacaaaacattattccacataattacatccgcaaattattcactacatttacataattacttcaagtaaca  4980300                             ------->GAMYB                            --------->MYB46(3)                      --------->CCA1(1)                            <---------MYB55(2)         <---------ANAC58                        <---------MYB59 --------->ARR14(2)   ------>ZmHOX2a(2)                       <---------ANAC55(2)             <---------ANAC58               --------->WOX13(1)       <---------ARR14(2)  <---------WOX13(1)             ---------- <-----------GT1  <---------ICU4--------->AtMYB61    --------->ARR11(3)       <-----------GT1      -- ----GT1 <---------ICU4--------->ANAC55(2)       --------->LBD16    --------->RVE1(1)  <---------TOE2(3)   attttaccacattatttcaattagtacttaaccaccaatgcatatttgttccgaatttcttgatcgataaatatccaaattaacaagttaatgaagaaaa  4980400                                          <-------PIF5                                         --------->ANAC46                                       <---------ALFIN1                                  <---------HSFC1(2)                                  --------->HSFB2a(1)                         --------->AHL20(2)    --------->ANAC46                         <---------AHL20(2)    --------->bZIP60(2)                        --------->AHL20(2)------->PIF5          ------------>CBF        <---------HSFB2a(1)    --------->GLK1(2)          <------ZmHOX2a(2)       --------->HSFC1(2)    <---------ARR14(2)                 *TSS  <---         <---------ARR11(3)      --------->ANAC58       <---------GLK1(2)           <---------ANAC58 <----------ID1----------->GT1 --------->At4g35610      --------->ARR14(2)          <---------ANAC58 ->GT1   --------->ARR11(3)  --------->YAB1  <---------ALFIN1                    --------->GLK1(2) ------->MYB52(1)------------>CBF--------->ANAC58   <---------At4g35610         <---------GLK1(2)<---   aaaacgaagaagatcaatggtcaatatttaatcagaagcatccacgtccacttcatcagattctatctctctctctctgtaagattccttgctctcgcgc  4980500                                           --------->DEAR3(1)                                          --------->DEAR3(2)                                        <---------ALFIN1                   <---------MYB46(3)  <---------ZAT14                   --------->MYB52(2)  --------->ZAT14                                <----------DOF2 <-----------GT1  <-------TEIL    --------->ZAT2                           ----------->RAV1(1) -------DOF2   <---------ANAC58 <-------PIF5                            <------ZmHOX2a(2) ------DAG2    <---------ANAC58 ------->PIF5<-----------HVH21          --------->AGP1<---------DAG2   ttttctctctctctctcgcgttcgttcttatccacgagctctgcaccgtcgcaatctccgtcttctccatttagatccaacacagagccttttctacatg  4980600                         <---------HSFB2a(2)               <---------ANAC58                                           <----------DOF2               <---------ANAC58    <----------DOF2                       --------->TOE1(3)               <---------ANAC46    <---------DAG2        <---------ARR11(3)         <---------GLK1(2)              --------------->AtSPL8               --------->CCA1(2)     --------->TOE2(3)          -              --------------->AtSPL3          <---------ZAT14         <-----------GT1             <--      ---------->DOF2    --------->HSFB2a(2) --------->ALFIN1<----------DOF2    ---------->DOF2  <---   aaattcggcaaagagtttcgtactcacctcgaagaaactttaccagagtggagagacaagttcctttgctataaacctttaaaaaagcttctcaaatatt  4980700                                                                                                    <                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                <XXXX                                                                                              -------                                                                                              -------                                                                                             --------                                                                                             <------NtERF2                                                                                             --------                                                                                            ------>NtERF2                                                                                            <--------                                                                                           ----------                                                                                           --------->DREB2C(2)                                                                                           --------->At1g77200                                                                                           --------->DEAR3(1)                                                                                           --------->RAP2.3(3)                                                                                          --------->ERF1                                                                                          --------->ATERF1(1)                                                                                          --------->RRTF1(1)                                                                                          --------->RAP2.3(1)                                                                                          --------->ORA47(2)                                                                                          --------->DEAR3(2)                                                                                          <------NtERF2                                                                                         <---------ATERF1(1)                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                                         ------>NtERF2                                                                                         --------->ABI4(1)                                                                                        --------->RAP2.3(3)                                                                                        --------->RRTF1(3)                                                                                        --------->RRTF1(2)                                                                                        --------->RAP2.6(2)                                                                                        <---------ATERF1(2)                                                                                        --------->DEAR3(1)                                                                                        <---------DEAR3(1)                                                                                        --------->ATERF1(2)                                                                                        --------->RAP2.3(2)                                                                                       --------->DEAR4(2)                                                                                       --------->ORA47(2)                          ------>NtERF2                                                --------->RRTF1(1)           --------->LBD16--------->LBD16                                              --------->RAP2.3(1)           <---------At4g35610                                                         --------->ERF1           ------>NtERF2 --------->ANAC58                                              --------->RAP2.6(1)          --------->DEAR3(1)                                                           --------->ATERF1(1)         <---------LBD16 --------->ANAC58                                             <---------ATERF1(1)     <-----------GT1     --------->ANAC46                                             --------->At4g35610  <---------ICU4        --------->MYB46(3)                                            <---------RAP2.3(1) --------->ICU4        <---------ATERF1(1)                                            --------->LBD16 ------>ZmHOX2a(1)    --------->PCF2         --------->ARR14(2)                       <---------At4g35610 <---------YAB1       --------->ARR14(2)     <---------GLK1(2)                        ------>NtERF2<- -------->TOE2(3)     <---------ARR14(2)     <---------ARR14(2)                      --------->ANAC46 -------YAB1   --------->ARR14(2)     --------->YAB1      --------->ARR14(2) <---------ARR11(3)<----- --------GT1   <---------ARR14(2)    <------ZmHOX2a(2)    <---------ARR14(2) --------->ARR11(3)------   atccttattactccgccgattttggacccgccaattccgatcacaacgattcgcgtccagtatttgctgatactactaacatctcttccgccgccgacga  4980800              --------->RAP2.3(1)      <---------MYB46(3)     --------->ALFIN1     <---------AtMYB61   <---------ANAC46   --------->ALFIN1  <------NtERF2 <---------MYB46(3) <---------DEAR3(2) --------->ANAC58 ---------DEAR3(1)  --------->ANAC58 -----NtERF2 --------->LBD16 -------RRTF1(1)  <-----------RAV1(2)       --------->MYB52(2) --->NtERF2  ------>NtERF2                 <-------TEIL -------RAP2.3(1) --------->SPL7      --------->LBD16 -------ERF1--------->LBD16          <---------LBD16 ------RRTF1(3)  <------NtERF2    ===========================HOX2a_HOX2a ------RAP2.3(2)<-----------HVH21 ------>ZmHOX2a(2) ------RAP2.3(3)<---------SPL7   <------ZmHOX2a(2) ------DEAR3(1) ------>NtERF2    ============================HOX2a_HOX2a ---->ATERF1(1)--------->TGA1a   <---------GLK1(1) XXXXXXXXXXXXXXXXXMIR2935        --------->GLK1(1) -->DEAR3(1)<---------LBD16     <-----------ARR10 ---->HVH21<---------HSFB2a(2)  --------->ARR14(3)            <---------TOE2(3) ->ATERF1(1)--------->ANAC46    --------->ARR11(3)           --------->MYB52(1) ->SPL7 <---------ARR14(2)      <---------ARR14(3)        --------->ANAC55(2)                <------- -ATERF1(1)<---------LBD16      <---------AGP1<---------MYB52(1)     ------->TEIL          <--------- ->HVH21--------->ARR14(2)      <---------ARR14(2)        <---------ANAC55(2)      <---------TOE1(3) --------ABI4(1)<-----------TGA1<---------ARR11(3)     --------->ARR14(2)          <---------TOE2(3) ----ATERF1(1)<------NtERF2     --------->ARR14(2)     <---------ARR14(2)         <-----------GT1 >NtERF2<---------PCF2        ----------->ARR10       <------ZmHOX2a(1)      ----------->GT1<--------   cggcggtgtggttcccggcgtcaggccatcggaagatctccagggttcgtttgtgaggatacttaacgatgaacttgagaagtttaacgatttttacgtt  4980900                                                 <---------YAB1                                               <---------AHL20(2)   <------ZmHOX2a(1)                          <---------AHL20(2) --------->ANAC58                             --------->AHL20(2) <---------TOE2(3)    --------->At4g35610     --------->AHL20(1)      --------->WRKY18(1) --------->ANAC58   --------->YAB1            <---------AHL20(1)   --------->MYB59             <----- --ANAC46       <---------MYB52(1)        --------->LBD16     <---------ARR11(3)          --------->ANAC55(2) --GT1    --------->ARR11(3)         <---------ANAC58        <------ZmHOX2a(1)         <-------TEIL -TOE2(3) <---------ARR11(3)         <---------ANAC58     <-----------RAV1(2)  --------->ARR11(3)   gataaggaagaagatttcgttatcagattacaggtttttgcttccgaatttattctagcttcaggattttaggtcaagttagaacttggttcatgtgatt  4981000  Previous    Next  AGI:  At5g15330.1    Description:  SPX (SYG1/Pho81/XPR1) domain-containing protein. similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G26660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15014.1); contains InterPro domain SPX, N-terminal (InterPro:IPR004331) Range:  from: 4980491    to: 4982234    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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