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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
ZmHOX2a(1)
===================
HOX2a_HOX2a
<---------
ARR14(2)
===========================
HOX2a_HOX2a
--------->
ARR14(2)
<------
NtERF2
<------
NtERF2
--------->
LBD16
--------->
LBD16
<------
NtERF2
<------
NtERF2
<---------
At4g35610
<---------
LBD16
------>
NtERF2
<---------
MYB46(3)
<---------
LBD16
------>
NtERF2
--------->
At4g35610
<---------
DEAR3(1)
--------->
LBD16
------>
ZmHOX2a(2)
--------->
ALFIN1
<------
NtERF2
<---------
ARR14(2)
<-------
GAMYB
<---------
DEAR3(1)
------>
ZmHOX2a(2)
--------->
ATERF1(1)
--------->
ATERF1(1)
<------
ZmHOX2a(2)
<---------
DEAR3(2)
<---------
ANAC58
<---------
RAP2.6(2)
--------->
ARR11(3)
<---------
DREB2C(2)
<---------
ANAC46
<------
NtERF2
<---------
ARR14(2)
<---------
DEAR4(1)
<---------
ANAC58
--------->
ATERF1(1)
<---------
ARR11(3)
<---------
MYB46(3)
<------
NtERF2
--------->
ABI4(2)
--------->
ARR14(2)
<---------
At1g77200
--------->
ALFIN1
<---------
MYB46(3)
<---------
GLK1(1)
<---------
DEAR3(1)
--------->
ZAT2
<---------
ATERF1(1)
--------->
GLK1(1)
<-----------
HVH21
<---------
At4g35610
------>
NtERF2
===================
HOX2a_HOX2a
<---------
MYB46(3)
--------->
At4g35610
-------->
ALFIN1
<------
ZmHOX2a(1)
--------->
ARR11(3)
<---------
ANAC46
<---------
ZAT2
-->
REM1(1)
====================
HOX2a_HOX2a
<-----------
RAV1(1)
<--------
P
------->
GAMYB
<
cggtggccgcggaggaagggaggagatcgtggatcgaagaaattgtactgtcggtggcggaattgaagaggtaagctgcaacggtgtcgtattgctcttc
4633300
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
CCA1(2)
<---------
ANAC46
<------
NtERF2
<-----------
HVH21
------>
NtERF2
<---------
ANAC46
<---------
DEAR3(1)
<---------
ZAT18
--------->
TOE2(3)
<---------
MYB52(1)
<---------
ZAT14
--------->
TOE1(3)
<---------
LBD16
xxxx
------>
ZmHOX2a(1)
--------->
At4g35610
--------->
DEAR3(1)
xxxxx
<---------
ALFIN1
<---------
At4g35610
--------->
ANAC46
<----------
DOF2
<--------
----------
DOF2
--------->
ZAT14
--------->
ZAT14
------>
ZmHOX2a(1)
--------->
LBD16
<---------
MYB52(1)
ttctttctctcctccccccagtgtagtagtagtctctgctctcttcttctccttaaacggcgtcgtatccggttctttcttcttgctctgttttttgttg
4633400
--------->
GLK1(2)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
GLK1(2)
<----------
DOF2
<---------
ANAC46
<<<<<<<<<
TBF1
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
At4g35610
----------
xxxxxxxxxxxx>
smallRNA(i)
<---------
HSFB2a(2)
<---------
ZAT6
<----------
xxxxxxxxxxx>
smallRNA(i)
--------->
HSFB2a(2)
--------->
ALFIN1
>>>>>>>>>
CBP60g
---
RAV1(1)
<---------
ANAC58
--------->
ARR11(3)
--------->
At4g35610
>>>>>>>>>
SARD1
ttgttcttcttcttgctcttcttgcttctgggattctcgttgatctcgtgagaagtgttgagctcgagcttgagactgagaaatttgggttttttcgttt
4633500
<---------
ANAC58
<---------
ANAC58
--------->
HSFC1(2)
<---------
HSFC1(2)
-
<--------
P
---
<---------
O2
<---------
MYB46(3)
-----
----------->
HVH21
<---------
AtMYB61
<----
--------->
ANAC55(2)
<---------
MYB46(3)
------>
ZmHOX2a(2)
--------->
TOE1(2)
--------->
ALFIN1
<-----------
GT1
------>
ZmHOX2a(1)
------>
ZmHOX2a(2)
--------->
ATHB12
<---------
AtMYB61
<---------
MYB52(1)
==============
>
ID1
<---------
ARR11(3)
<---------
YAB1
------>
ZmHOX2a(1)
<------------------------
ANAC81
-
-
GT1
--------->
ARR11(3)
--------->
ICU4
--------->
ANAC46
<---------
At4g35610
<---------
ARR11(3)
ttgttctgatcttacgagacgcgtcaagattggaagaagacttatcctccatggtggtggtagcttctctgttttttctcttcttgatcctcttcgatga
4633600
<----------
DOF2
<---------
ANAC58
--------->
MYB52(1)
<---------
SPL7
------>
NtERF2
<---------
ETT(2)
--------->
ETT(2)
<-----------
GT1
--------->
ARR14(2)
-------->
TOE1(1)
--------->
DEAR3(1)
------>
ZmHOX2a(2)
--->
ZmHOX2a(2)
--------->
MYB46(3)
--------->
ANAC46
---->
ARR11(3)
----------->
HVH21
<---------
ALFIN1
--------->
ZAT6
-----
ARR11(3)
------>
NtERF2
<---------
ANAC58
<------
ZmHOX2a(2)
<-----------
GT1
====
HOX2a_HOX2a
--------->
DEAR3(1)
---------->
ID1
--------->
GLK1(1)
<----------
DOF2
-------->
TOE2(1)
----------->
HVH21
<-----------
RAV1(1)
<---------
GLK1(1)
--------->
ZAT6
<-
tctcgtactctgtttttcttctccgacgaccggacttgctttgttgctacacat
ctccgatctctgtctctctctctctctaacactttaactcttctct
4633700
------->
MYC3
<-------
MYC4
-------->
ABF1
------->
MYC4
------->
MYC2
<-------
MYC2
<-------
MYC3
--------->
ANAC55(2)
<--------
ABF1
<---------
TGA1a
<---------
ANAC55(2)
=============
<---------------
AtSPL8
<---------------
AtSPL3
---
----------->
HVH21
--------->
TGA1a
<---------
At4g35610
--------->
O2
<------
MYB46(1)
=======================================
bZIP_DOF
<------
MYB83
---------->
DOF2
----------------------->
TaNAC69(2)
<---------
AtMYB61
<---------
ZAT2
<---------
O2
---------->
ID1
--------->
MYB111(2)
--------->
At4g35610
----------->
HVH21
<
---------
DOF2
*
TSS
--------->
YAB1
--------->
ALFIN1
--------->
ZAT2
<---------
DAG2
-------
gctttctaagttttgt
tctcattttctcgctcactcagaagtatgtaggtggagcgagagggaaagctgacagtgatggtaccttttgacacgtgtctat
4633800
--------->
DAG2
<------
MYB83
---------->
DOF2
<------
MYB46(1)
<------------
CBF
<-----------
RAV1(2)
--------->
ATHB12
--------->
GLK1(2)
<---------
TOE2(3)
===================
bZIP_DOF
<---------
ARR14(2)
<---------
TOE1(3)
------>
WOX13(1)
<---------
GLK1(2)
--------->
DAG2
---------
ATHB12
--------->
YAB1
--------->
ALFIN1
<--------
P
<-
-->
WOX13(1)
<------------
CBF
<---------
YAB1
<------
ZmHOX2a(1)
<---------
ANAC46
cagtcattggataaagctattgtaatcttggattctgtttggatgtgcaggagataataaggttggattagattactacattacatctgtgtcttaaact
4633900
<---------
ANAC58
<---------
ANAC58
<---------
AHL20(1)
--------->
ARR11(3)
--------->
AHL20(1)
--------->
YAB1
-------
<---------
AHL20(2)
--------->
DAG2
--------->
YAB1
--------->
AHL20(2)
---------->
DOF2
------>
MYB83
<---------
AHL20(2)
<----------
DOF2
<----------
DOF2
<---------
YAB1
--------->
AHL20(2)
<---------
YAB1
--------->
YAB1
<---------
DAG2
--------->
AHL20(2)
----------->
GT1
----------->
GT1
<---------
DAG2
<-----------
GT1
------>
MYB46(1)
--------
YAB1
<---------------
AGL15
<-----------
GT1
------->
TEIL
<-----------
GT1
----------->
RAV1(1)
tctgattagttaattatatattgggtaactccattcttattttcaacttttcataaagcaccttgtttttctactttttagataccaacatttttataat
4634000
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
------->
GAMYB
<---------
AHL20(2)
--------->
MYB46(3)
<---------
AHL20(2)
<-------
TEIL
<---------
ARR11(3)
<---------
GLK1(1)
--------->
DAG2
--------->
ARR11(3)
--------->
CCA1(2)
---------->
DOF2
<---------
AHL20(2)
--------->
GLK1(1)
------>
MYB83
<---------
AHL20(1)
<---------
ARR14(2)
------>
MYB46(1)
--------->
AHL20(2)
--------->
ARR14(2)
----------->
RAV1(1)
--------->
AHL20(1)
--------->
ALFIN1
<---------
MYB52(2)
--------->
AHL20(2)
<---------
TOE2(3)
--------->
YAB1
<---------
YAB1
<---------
AHL20(2)
-->
YAB1
---------->
DOF2
--------->
ZAT18
--------->
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
gttcacattttttaaaaaaggtttgggatatgtgcattagtaaccaacatttttataaagttgacattttaaatatattttaattcaaattaacatgagg
4634100
<---------
YAB1
--------->
YAB1
--------->
AHL20(2)
----------->
GT1
------>
ZmHOX2a(2)
<----
<---------
TOE2(3)
<---------
RVE1(1)
-----
---------->
DOF2
<---------
CCA1(1)
---------->
DOF2
--------->
ANAC58
<---------
ARR11(3)
<---------
CCA1(2)
--------->
ANAC58
----------->
RAV1(1)
<---------
AHL20(2)
>>>>>>>>>
RAP2.2
-
---------->
DOF2
<-----------
GT1
<----------
DOF2
--------->
ARR11(3)
<---------
AHL20(2)
-
ttgacattaagcaaaggtaattaacatgatcagtttttctttaggcatcaacagattaacatgagatttttttgatccaatattatatctaaagtgatat
4634200
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AGI:
At5g14370.1
Description:
similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14646.1); contains InterPro domain CCT (InterPro:IPR010402)
Range:
from: 4631894
to: 4633716
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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