Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ZAT2                                                       <---------At4g35610                                                     <-----------RAV1(2)                                                    <---------At4g35610                                                    <---------ZAT2                                                    --------->At4g35610                                        <---------DOF5.7(2)                                       <---------WRKY12--------->ZAT2   <----------DOF2                                       <---------WRKY45--------->At4g35610                        ---                                       <---------WRKY38(1)     <---------CCA1(2)                 ----       ---------->DOF2   <---------DOF5.7(2) <-------TEIL    <---------WRKY38(1)    <---------ALFIN1 ---------DOF2         --------->DOF5.7(2) <---------SPL7  <-----------HVH21   <---------REM1(2) <--- --------DOF2    <----------DOF2      --------->WRKY18(1) ----------->GT1      --------->ZAT14-------   cctttgggagaaagatgggctttgcgataacgatttcaaggtcaacgtacagacagcagctggtcaaatctcttctttctcttcacacactggcagtgag  4501000                                                                                    --------->GLK1(2)                                                                                    <---------ARR14(2)       <---------YAB1                                                  --------->GLK1(2)  --------->ANAC55(2)                                                  --------->ARR11(3)  <---------ANAC55(2)                                        --------->GLK1(2)      --------->ARR14(2) <-------TEIL                       --------->GLK1(2)       <---------GLK1(2)--------->ATHB12 -------->GT1                  ------->GAMYB          --------->ATHB12 <---------ARR11(3) ----------->AtSPL8  --------->AHL20(2)         --------->GLK1(2)     --------->RVE1(1)         <---- ------------AtSPL8  <---------AHL20(2)         --------->ARR11(3)  <---------AHL20(2)   <---------MYB52(1) -->ATHB12          --------->AHL20(2)          <---------ARR11(3) --------->YAB1  <---------GLK1(2)   tggtacataattcttgaacaaaaaaaatttcaaccgagattccatagaaaaatctttgattagaatctataaaaatctttgattagaatctgttaagtct  4501100                                                                                 ----------->GT1                           ------>ZmHOX2a(1)                               <----------DOF2                          --------->TOE2(3)                          --------->ANAC46             <--                        ------>ZmHOX2a(1)  <---------YAB1            --------->ANAC58   --------->ARR11(3) ------DOF2    --------->ZAT6         <---------CCA1(2)              --------->ANAC58   --------->GLK1(2)   ttaaaaaactcaaactctcactaatcctccttaaatttgtgtatcattttagttttgaaaaaccatggaataggcaacttttgtagttaaaatctgtttc  4501200                           <-----------HVH21                       <---------ARR14(3)                       <---------ARR14(2)                       --------->ARR14(3)                       <---------ARR11(3)                       --------->ARR14(2)                       --------->ARR11(3)                       --------->AGP1                     ----------->ARR10                   <---------At4g35610                   --------->LBD16                    --------->LBD16          --------->LBD16 <----------DOF2           <---------LBD16         <---------HSFB2a(2)                   <---------GLK1(1)         --------->HSFB2a(2)                   --------->GLK1(1)        <---------LBD16<---------AGP1--------->ANAC55(2)                                         <---      <---------ARR14(2) ------>ZmHOX2a(2) ------>ZmHOX2a(2)  --------->RVE1(1)                  ----      --------->ARR14(2)<------ZmHOX2a(2) --------->At4g35610--------->GLK1(2)                 <-----     <---------GLK1(1)<---------CCA1(2)   <---------At4g35610--------->ARR11(3)       >>>>>>>>>GT-1 --------DOF2--------->GLK1(1)       <---------ANAC55(2)     <---------ARR11(3)    ----------->GT1   cttttgaatttccggaaataccgcagatctttcacagataagtgatctgatttctcagggaaaaatctctgatttgatttcaacatggttaatatttctt  4501300  <---------AHL20(1)                                                                     <----------ID1  --------->AHL20(2)                       <---------AHL20(2)                       ---------->DOF2  --------->AHL20(1)                       --------->ATHB51                     ---------->DOF2  <---------AHL20(2)                       --------->AHL20(2)                 <------NtERF2 <---------AHL20(2)                ----------->RAV1(1)                      --------->LBD16 --------->AHL20(2)               ----------->HVH21            --------->DAG2------>NtERF2 ------AHL20(2)                   <---------ETT(1)            ---------->DOF2--------->LBD16        < ----->AHL20(2)                  ------>ZmHOX2a(2)<------ZmHOX2a(1)         <---------LBD16         - -----DOF2      ---------->DOF2  ========================HOX2a_HOX2a       <---------LBD16<------ZmHOX2a(1)   taaataaattgggccttagaaagcccatccattgatccgacagaattatttaggagggaaaccgaaaagttgaaatcgccgggaaagaaagaggacaaac  4501400              <----------DOF2     <---------ANAC58     <---------ANAC55(1)                    --------->YAB1     <---------ANAC58                       <---------ICU4     --------->ANAC55(2)                --------->AHL20(1)     <---------ANAC46                   <---------AHL20(2)    ----------->GT1     <---------ANAC55(2)         ---------->DOF2             <------ZmHOX2a(1)              <-------- ---------AHL20(2)           --------->AHL20(2)  *TSS  ---------->DOF2                      <-------- -------->AHL20(2) ------>ZmHOX2a(1)    --------->AHL20(2)  ----------->GT1           ---------->ID1   atttatttcgtgtctactttcctccttgaaataaaaaaagaattaattataccaaaaaaaagaggagaaaaaaaaaactctcatcttcgtcgtcttcaca  4501500                                                      <---------------AtSPL3                           <---------ANAC58           --------->LBD16                           <---------ANAC58<---------MYB52(1)                                     ---                        ------>ZmHOX2a(1)--------->ANAC46                                         ---              ----------------------->TaNAC69(2)<---------DAG2                               --------             --------->At4g35610        <---------LBD16   <-------TEIL                       <------- -ZAT14      <---------At4g35610<------------------------ANAC81                    <---------ICU4---- -REM1(2) <---------At4g35610<---------CCA1(2)  <----------DOF2                    --------->ARR14(2)   gtttcaatctcgcgctgcttagtctccttccgtctcttcttctccgctagcttttccaggtacgtctgtctctctaacctctcaatatttgcccatttcc  4501600             <---------MYB52(1)           <---------ANAC46             <---------MYB46(3) ------>ANAC46 --------->MYB52(2)       <-----------RAV1(1)         --------->LBD16              ---- ------>TOE1(1)<---------ANAC58      <----------DOF2               <---------LBD16              ----- ->ARR14(2)<---------ANAC58  --------->HSFB2a(2)                  <-----------RAV1(2)   <---------MYB46(3) --ARR14(2)<---------ANAC58 <---------LBD16           <---------TOE1(2)   ---------->DOF2 <---------ANAC46 -->ZmHOX2a(1) <---------ANAC58 --------->TCP20<---------GLK1(1)  <---------LBD16   ------>ZmHOX2a(2)   tcgtaatactgttccgttcgtgtctcgatttgtggaacccttttgttggaatttcgagggttttgttttcaggggaaaaagagtgatcgatggctggaaa  4501700                                                   <-------TEIL                                           <---------ZAT14                        --------->MYB52(1)--------->ALFIN1                        ------>MYB46(1)   <---------ZAT6                                <------NtERF2                        ------>MYB83     >>>>>>>>>TAC1                                 ------>NtERF2                      <---------MYB59<------ZmHOX2a(2)                      <---------At4g35610                  ----------->HVH21 --------->ARR14(2)                      --------->At4g35610                  ------>ZmHOX2a(1) <---------ARR14(2)                     --------->MYB52(2)       <                  ==========================HOX2a_HOX2a            ---------->DOF2    <---------ANAC46 ----->DAG2     ----------->RAV1(2) <---------ARR11(3)  --------->DAG2   <---------MYB52(1)      <--- ----->DOF2     <---------At4g35610 --------->ARR11(3) ---------->DOF2  <-----------HVH21<----------DOF2   aaggaaacgagctaatgctcctgaccaaacagagcgaagatcgagtgttcgggttcagaaagtgagacagaaagcgttagatgagaaggcgcgtttagta  4501800           <---------At4g35610----------->GT1                              <------ZmHOX2a(1)      <-------GAMYB          --------->DAG2                 <---------ANAC55(2)     ----------->GT1      ---------->DOF2                   --------->ANAC55(2) ------ZmHOX2a(1)   ----------->HVH21                      <-------TEIL  ----------->GT1 --------RAV1(2)------>ZmHOX2a(1)              ----------->HVH21  ---------->DOF2  --------->ETT(2)   caggagagggttaagctcctcagtgacagaaagagtgaaatttgtgtcgatgacactgagttacatgagaaagaagaggaaaatgtcgatgggagcccta  4501900  Previous    Next  AGI:  At5g13960.1    Description:  SUVH4 (SU(VAR)3-9 HOMOLOG 4). Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 (SUVH4) [Arabidopsis Thaliana] (GB:Q8GZB6;GB:Q9C5P3;GB:Q9FFX9); similar to SUVH5 (SU(VAR)3-9 HOMOLOG 5) [Arabidopsis thaliana] (TAIR:AT2G35160.1); similar to SUVH6 (SU(VAR)3-9 HOMOLOG 6) [Arabidopsis thaliana] (TAIR:AT2G22740.2); similar to SUVH6 (SU(VAR)3-9 HOMOLOG 6) [Arabidopsis thaliana] (TAIR:AT2G22740.1); similar to putative SUVH4 [Oryza sativa (japonica cultivar-group)] (GB:BAB89674.1); similar to Os01g0927000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045266.1); contains InterPro domain Pre-SET zinc-binding region; (Inter Range:  from: 4501449    to: 4506190    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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