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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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             <---------ARR14(2)            --------->ATHB12
  <---------ANAC58                        <---------ATHB12
  <---------ANAC46                        <------ZmHOX2a(2)     <----------DOF2
  <---------ANAC58       --------->AtLEC2 ========================HOX2a_HOX2a
----->ATHB12 --------->ARR14(2)           <---------YAB1    <---------ARR14(2)
-----ATHB12  <---------GLK1(2)    --------->ARR14(2)        --------->ARR14(2)
--ZmHOX2a(2)=====================================HOX2a_HOX2a<---------GLK1(2)              <<<<<<<<<CBP60g
-----YAB1   <------ZmHOX2a(1)---------->DOF2               <------ZmHOX2a(1)               <<<<<<<<<SARD1
 
cattggtgtgtatgaggattcttttgacatacaaaagaatactcgatcattggtatgcataaggattctttttctaatacgaagaaaatttccaaatttc  4055800
                                                                        <---------ANAC46
                                                                     --------->ALFIN1
                            <---------DAG2                           <---------ANAC46
                            <---------------AGL15                  <---------MYB46(3)
                            <----------DOF2                        <------MYB83
                            --------------->AGL15                  <------MYB46(1)               ---
          <----------DOF2  <-----------------AGL3                 <---------AtMYB61     ---------->DOF2
          <---------DAG2 <---------ALFIN1                         --------->ALFIN1  --------->ANAC58
       <-----------GT1--------->ANAC58                    <---------ANAC58   --------->ANAC58   <---
 <---------ANAC58     --------->ANAC58                    <---------ANAC58   --------->ANAC58  -----
 <---------ANAC58     --------->ANAC46          --------->LBD16   <---------DEAR3(1)--------->ANAC58
 
attttcttgttaactttttcttcaaaccccactttttatggcattcgaacccgaagtcatagcttatgggtggtggagtcgagccactagccaaagaatt  4055900
                                      <---------AHL20(2)
                                  <---------YAB1
                                 --------->AHL20(1)                     <---------ALFIN1
         <----------DOF2       <---------YAB1                          --------->MYB46(3)
      <---------YAB1          --------->AHL20(2)                     <---------WRKY18(1)
   <---------AHL20(2)         --------->AHL20(1)                 --------->ATHB12                  <
   <---------YAB1           --------->AHL20(1)                --------->ZAT2                       <
--------->AHL20(1)          <---------AHL20(1)                <---------At4g35610                  -
--------->AHL20(2)          <---------AHL20(2)                <---------ZAT2                --------
<---------AHL20(2)          --------->AHL20(2)         --------->ARR11(3)                --------->ANAC58
<---------AHL20(1)       --------->AHL20(2)    <----------ID1 --------->At4g35610        --------->ANAC58
------>AHL20(2)     ----------->GT1   --------->AHL20(2)    <-----------RAV1(2) ---------->DOF2  ---
------AHL20(2) <---------AHL20(2)<---------AHL20(1)    <---------ARR11(3)  --------->DEAR3(1)    <--
---->AHL20(2)  --------->AHL20(2)<---------AHL20(2)---------->DOF2 <---------WOX13(1)   --------->WOX13(1)
 
taaaatattattctttatttaaaatgtataaaatattatatttaaaaaaaaaaacaaagacctgcagctgattgaccaccgtctaaagagtcactcaaag  4056000
                                       <----------DOF2    --------->ARR14(2)
    ------>ZmHOX2a(1)               --------->GLK1(2)<---------ANAC46                             --
    ==========================HOX2a_HOX2a  <---------YAB1 <---------ARR14(2)                      ==
------NtERF2                       <---------ARR14(2)<---------bZIP60(2)                          --
---------At4g35610                 <---------GLK1(2) <---------ANAC58            ----------->GT1  <-
-------->At4g35610     <------ZmHOX2a(2)   <---------AHL20(2)          --------->ARR14(2)         --
-->DOF2         --------->At4g35610--------->ARR14(2)<---------ANAC58--------->LBD16              --
------>ZAT18  --------->MYB46(3)--------->YAB1 --------->AHL20(2)   <---------ANAC55(2)         <---
-------ZAT18--------->MYB52(1)--------->GLK1(2)<---------AHL20(2)   --------->ANAC55(2)   <---------
 
tccgctcctcaaatccaacggctgagatcgaagaatcagattctttataatttataacgtggatttgaaacccgtattccaaaacgcttaaatataccct  4056100
        ------>NtERF2
       <---------ALFIN1
       --------->DEAR3(1)
     ------>NtERF2
     <------NtERF2
    --------->ANAC58
    --------->ANAC58
    <---------ATERF1(1)
    --------->ANAC46
    --------->RAP2.6(2)
   --------->MYB46(3)
   --------->DEAR3(1)
  <---------ATERF1(1)
  <------NtERF2
  --------->ATERF1(1)
 <---------ATERF1(1)
 ------>NtERF2                          <---------ZAT14
 --------->PCF2                         --------->At4g35610
--------->ANAC58                        <---------At4g35610
--------->ANAC46                        --------->ZAT14
--------->ANAC58            <-----------TGA1
------->ANAC58              <-----------HVH21
===============================bZIP_DOF --------->ZAT2        --------->ZAT6              --------->ANAC58
------->TGA1a              --------->ANAC46                   <-----------GT1             --------->ANAC58
--------TGA1a              <---------ANAC55(2)   <----------DOF2                         *TSS
------->ANAC46      <----------DOF2     <---------ZAT2      <-----------GT1           <-----------HVH21
------->ANAC58      <---------DAG2   --------->At4g35610  <----------DOF2            --------->LBD16
------ALFIN1   <---------At5g28300  --------->ANAC46<-----------GT1        <---------ALFIN1     ----
--GT1<---------ATERF1(1)   --------->ANAC55(2)   ----------------------->TaNAC69(2)<---------LBD16<-
 
cacgcgcccgccaccttctaccgctttatcccgtcacatacgctgcagagctctttaacctctttacactatctctcaccacttcttccggtcacaccag  4056200
                                                        <-------TEIL
                                                       <--------P
                                                    <---------TOE1(3)
                                                    <---------TOE2(3)
                                                    <---------AtMYB61
                                                <---------At4g35610
                                                ----------->RAV1(2)        <<<<<<<<<TBF1
                                                --------->At4g35610     <<<<<<<<<TBF1
                                                --------->ZAT2  ========================HOX2a_HOX2a
                                        --------->GLK1(2)       ------>ZmHOX2a(2)
                           <-----------GT1    <-----------RAV1(2)    <<<<<<<<<TBF1
           <---------MYB52(1)   <----------DOF2 <---------ZAT2<---------ARR11(3)                 ---
          <------------------------ANAC81--------->RVE1(1)    --------->ARR11(3)       <----------DOF2
----->ARR14(2)           <-----------GT1<---------ARR11(3)  ============================HOX2a_HOX2a
--------At5g28300<---------MYB52(1)     --------->ARR11(3)  ------>ZmHOX2a(2)    ------>ZmHOX2a(1)
 
ttaccctctcatccgttttcgttttttttttctctctttcaaaaatctctcagctgaggttgatcgatcttcttcttcttcttcctcactctttagattt  4056300
                        ------>ZmHOX2a(2)                                                    <------
                       --------->At4g35610                                                 ------>ZmHOX2a(2)
                       <---------At4g35610                <---------MYB52(1)              <------ZmHOX2a(2)
                      <---------AGP1                  <---------DOF5.7(2)           -------->P
                      --------->ARR14(2)              <---------At5g28300          <-----------GT1
                      <---------ARR14(2)            <---------MYB52(1)           <---------ANAC58
                <----------DOF2                     --------->DOF5.7(2)          <---------ANAC58
 <----------DOF2<---------DAG2                     <-------GAMYB <-------TEIL  <-----------GT1  ----
------->ID1<-----------GT1       --------->ALFIN1 --------->ANAC46        <---------MYB52(1) <------
 
gttccttttgcattttacacttttggatctgaaaatgtggttctctgtttcgcccgttaccgtttagattcagttctgtttttttcttacccgatcgctt  4056400
                          <---------ANAC55(2)
                          --------->ANAC55(2)
                          <---------ANAC55(1)                                                <------
                          <---------ANAC58                                                   -------
                          <---------ANAC46   --------->ARR14(2)                              <------
                      <----------DOF2        <---------ARR14(2)                              <------
           ------>ZmHOX2a(2)                 --------->ARR11(3)      <---------YAB1          -------
          <---------YAB1  <---------ANAC58   <---------ARR11(3)   <----------DOF2            -------
---ANAC58--------->ARR11(3)           --------->At4g35610     <---------GLK1(2)    --------->WOX13(1)
----->ATHB12<----------DOF2       <---------GLK1(2)          -------->HAHB4      <---------YAB1
---ANAC58<---------ARR11(3)       --------->ARR14(2)        <---------ATHB12    <-----------GT1    <
 
gattcggactgtgatctttggtaagctttacgtattagatttgctgaagaacttcagtttcaaatgattcttttgatttagtttatcaatctgaaatata  4056500
          <---------TOE2(3)
       <---------WOX13(1)                         --------->WRKY38(1)
     <---------MYB46(3)                           --------->WRKY12
     --------->ATHB12                            <---------WOX13(1)
<---------HSFB2a(2)                             <-------GAMYB
---AHL20(1)                                    <---------MYB46(3)
-->AHL20(2)                                   <---------YAB1
---ARR11(3)                                   <---------TOE2(3)
---AHL20(2)                             <---------YAB1                      <---------AHL20(2)    <-
-->AHL20(1) --------->ARR11(3)       --------->GLK1(1)      <---------WOX13(1)   <-----------GT1  --
-->ARR11(3) <---------ARR11(3)      --------->ARR11(3)    --------->ATHB12 <---------AHL20(2)    ---
---------LBD16                    <---------TOE2(3)<---------WRKY18(1) <----------DOF2        <-----
 
tttctgggtgattgagattttaagtcaaaatagttttgagatttcgattgtggttgactgttcattgacttcttcttttttatttatcaatttgtttcta  4056600
                                                                         <------ZmHOX2a(1)
                                                                        <------MYB46(1)
                                                                        <------MYB83
                                                                      <--------P
                                                                    <------MYB46(1)
                                                                    <---------MYB46(3)
                      <-------GAMYB                                 <------MYB83
                     <------MYB46(1)                               --------->MYB111(1)
                     <---------MYB46(3)                            <---------MYB46(3)
                     <------MYB83                                  --------->MYB55(2)
                  <-------GAMYB                                    <---------AtMYB61
                 --------->MYB111(1)                               --------->MYB111(2)
                 <---------MYB46(3)                                --------->MYB46(2)
                 --------->MYB111(2)                              <---------MYB55(1)
                 --------->MYB55(2)                               <--------P
            <---------TOE2(3)                                    <-------GAMYB
    ----------->GT1  ----------->GT1                            <---------MYB46(3)
--------AHL20(2) --------->MYB52(2)                             <------MYB46(1)
------->AHL20(2) --------->MYB46(2)                             <------MYB83
------>AHL20(2)<--------P                    ---------->DOF2   <---------AtMYB61
----YAB1    <---------TOE1(3)       <---------CCA1(2)   <---------At4g35610   <---------AHL20(2)
 
attaatatggtttttaaggttagttggttatattgaatcgtctcttcttaaagttgtttatctgatttggttggtaggaatttttttctgagtagaagaa  4056700
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AGI:  At5g12850.1   
Description:  zinc finger (CCCH-type) family protein. similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT2G41900.1); similar to Zinc finger, CCCH-type [Medicago truncatula] (GB:ABN08215.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74402.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23558.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Ankyrin (InterPro:IPR002110)
Range:  from: 4056190    to: 4059583    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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