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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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    --------->ARR11(3)
    <---------ARR11(3)                                       --------->YAB1
------->YAB1                                              --------->YAB1
-TEIL--------->CCA1(2)                                    ------->GAMYB
->CCA1(2)                                                 --------->AtMYB61
->ARR14(1)                                               --------->MYB46(3)
>ARR14(2)         --------->YAB1                    --------->ANAC58         --------->At4g35610
-GLK1(2)          <---------ICU4         ----------->GT1-------->P           <---------At4g35610
-ARR14(2)      ------>MYB46(1)   <---------ICU4     --------->ANAC58      <---------At5g28300
>ARR11(1)      ------>MYB83      --------->YAB1     --------->ANAC46---------->DOF2
>ARR10       <---------MYB59    <---------ATHB12  --------->At4g35610    <-----------GT1   ---------
 
attataagatatagaaccaaattatcacatagcaaatcatgaaatggtatatcagaagcaaccatcagaataaaagttacagcttcaataagagaatgaa  3139900
                                               --------->ARR11(3)                           ------>ZmHOX2a(2)
                                              --------->YAB1                               <------ZmHOX2a(2)
                                             <---------YAB1                                ---------
                                  --------->ANAC58                                        --------->ARR11(3)
                                  --------->ANAC58                                        <---------ARR11(3)
                    <----------DOF2       --------->ICU4     ------->GAMYB                --------->ARR14(2)
                   <---------DAG2 --------->AtLEC2          --------->MYB46(3)            --------->AGP1
                 ------->TEIL    --------->WOX13(1)       --------->WOX13(1)              <---------ARR14(2)
                <-----------GT1 ---------->DOF2<---------ARR11(3)                        --------->GLK1(1)
             --------------->AtSPL8      --------->ARR11(3)-------->P          ---------->DOF2------
        ---------->DOF2        --------->WRKY18(1)  --------->YAB1  ----------->GT1      <---------GLK1(1)
--------------->ANAC81        <---------RAP2.6(3)  <-------TEIL   --------->CCA1(2)     ----------->ARR10
 
acagagaaacacaaagtttgaacctttttttgcagtcaagcagagataatgatattcatatcaaccaagagatgaaaattcagaaagaagagagatccga  3140000
                                                          --------->LBD16
                                                        <---------LBD16
                                                        --------->LBD16
                                                     >>>>>>>>>>E2Ff
                                                     >>>>>>>>>>E2Fd
                                                     >>>>>>>>>>E2Fc
                                                     >>>>>>>>>>E2Fe
                                                     >>>>>>>>>>E2Fb
                                                     >>>>>>>>>>E2Fa
                                                 <---------DAG2
   --------->HSFB2a(1)                           <----------DOF2  --------->AtLEC2
  ------->TEIL                                 ------->TEIL <---------ARR14(2)   ---------->DOF2   <
>CCA1(2)                  ---------->DOF2<----------ID1--------->LBD16 ----------->GT1         <----
--->LBD16       <----------DOF2        ---------->DOF2<---------LBD16---------->DOF2         -------
 
agtcgaaccttgttctggtcttttgtgtcaaaagggcttcaaaaaagacgaacttttcccgcggaaaccatgaaaagagaaaactaaagctagatgaact  3140100
                       <----------CDC5
           --------->ANAC58
        --------->DEAR3(1)                                                   --------->ARR11(3)
       <---------At4g35610                                                   <---------ARR11(3)
   <-----------HVH21 --------->ANAC58     <---------At4g35610           --------->At5g28300
  <----------DOF2    --------->ANAC58     --------->At4g35610          <------MYB46(1)
-----------GT1      --------->SPL7 --------->ARR14(2)                  ----------->GT1
------DOF2 --------->ANAC58        <---------ARR14(2)           --------->MYB52(1)                 -
>TEIL  --------->At4g35610        <---------GLK1(1)    <---------YAB1  <------MYB83            <----
 
tttcactttcagcgacgaaatcgaacgctaagcctagaaatctgcagcttaaaccggtctgatagaataagggatggtaaaatctcgttctctgaacttg  3140200
                                                    *TSS
                                                 ---------->DOF2 <---------WOX13(1)
                                             --------->TOE2(3)  <------------CBF                <---
          <------ZmHOX2a(1)                  --------->TOE1(3) --------->ATHB12                -----
 <---------HSFB2a(2)                  --------->ANAC46        <---------YAB1                ------>ZmHOX2a(1)
 --------->HSFB2a(2)   --------->WOX13(1)    <----------DOF2<----------DOF2             <---------ARR11(3)
-------->At4g35610  --------->GLK1(2) --------->ANAC58   --------->ARR11(3)            <---------CCA1(2)
-------HVH21    >>>>>>>>>TBF1         --------->ANAC58   <---------ARR11(3)       <-----------GT1
 
tcatctcgaagaaggagaagaagaatcattcaagagagaacacgacaactttaaaagagagacctttgattgagttttctaaatttttctatatcctaat  3140300
             ----------->TBP
            <---------AHL20(1)
            --------->AHL20(1)
           --------->AHL20(2)
         --------->AHL20(2)
       --------->AHL20(2)               <------------------------ANAC81
      --------->YAB1          <-----------GT1                               <----------DOF2
      --------->AHL20(2)   <---------AHL20(2)      <-------GAMYB  <---------ARR11(3)
 ------------>CBF          --------->AHL20(2)     --------->MYB52(2)        ------>ZmHOX2a(1)   <---
------AHL20(2)          --------->TOE2(3)         <---------MYB46(3)     ---------->ID1        -----
---->AHL20(2)--------->AHL20(2)    <---------MYB52(1)        <---------DEAR3(1)      ---------------
 
aaatgtcaataaaaatatatatactaacatttatttctgtttttttttttggtttgttgattcttcggtgatatttgtcctttaagtatatgtactagat  3140400
                                                                           <---------AHL20(2)
                                                          <---------AHL20(1)
                                                          --------->AHL20(2)
                                                       --------->ATHB51    --------->AHL20(2)
      <---------ALFIN1                      <----------DOF2<---------AHL20(2)
  --------->At4g35610                      --------->TOE2(3)              --------->AHL20(2)
  <---------At4g35610                  --------->ARR11(3) <---------AHL20(2)
----TEIL                       --------->ICU4      <-------TEIL           <---------AHL20(2)
---->CCA1(2)         ------>MYB83      <---------ARR11(3) --------->AHL20(1)
>AtSPL8              ------>MYB46(1) <---------TOE2(3) --------->AHL20(2) <---------AHL20(1)--------
 
acatcagctacacagtcaaaaaccaaattttgacatgtttaagatacctttaagtccataatttattcgattactaatttaattttgtttctggttattc  3140500
                                                                             <---------ICU4
                                                                             <--------ATHB1
                                                                             -------->HAHB4
                                                                            --------->ICU4
                                                                            <---------ATHB51
                                                   --------->ARR11(3)       <---------YAB1
                                                   --------->AHL20(1)     --------->YAB1
                                                  --------->YAB1          <---------ICU4     <------
                                           --------->ANAC58              --------->ICU4 <----------DOF2
                                           --------->ANAC46              <---------YAB1 ============
                         <---------ALFIN1  --------->ANAC58            --------->YAB1 --------------
->KAN4(2)   <-----------HVH21          <-----------GT1              ----------->GT1   <-------------
 
tgtatttctctcatttgtcatgtctccactacctcgctgatgttacacaccaagtatattggaaaattattcagtaataataattcatactcttttaagt  3140600
                                                                        <---------ATERF1(2)
                                                                        --------->ATERF1(2)
                                                            <---------ANAC46         <------NtERF2
                                        <------NtERF2       <---------ANAC55(1)    <---------DEAR3(1)
                                        ------>NtERF2       <---------ANAC58      --------->LBD16
                                       <---------RAP2.3(1)  <---------ANAC55(2)  --------->ANAC46
                           <-----------HVH21                --------->ANAC55(2) <-------MYC2
                          --------->ANAC58                  <---------bZIP60(2) ------->MYC3
                          --------->ANAC46                  --------->bZIP60(1) ------->MYC2
                          --------->ANAC55(1)      <---------At1g77200  --------->bZIP60(1)
                          --------->O2<---------RAP2.6(2)   <---------TGA1a     <-------MYC3      --
                          ===============bZIP_DOF  <---------DEAR3(1)   <---------bZIP60(1)      <--
                    <-----------HVH21 <---------RAP2.3(2)   --------->TGA1a    --------->ANAC58  ---
                   --------->ANAC46   <---------DEAR3(1)    <---------O2--------->ANAC46         <--
                   --------->WOX13(1) <---------RRTF1(2)  <---------TGA2(2)    --------->ANAC46  ---
                <-----------GT1      <---------LBD16<---------DEAR3(2)  <---------RAP2.3(3)      ---
              <---------YAB1  ========================================bZIP_DOF <---------TGA1a   <--
            <---------AHL20(2)============================bZIP_DOF     --------->RAP2.6(3)      <---
           --------->AHL20(2) ---------->DOF2   <---------TGA1a       --------->MYB52(1)        <---
        <---------AHL20(2)<---------O2<---------ANAC46   ----------->TGA1------>NtERF2          ----
       --------->AHL20(1) --------->ANAC58      ======================bZIP_bZIP--------->ANAC58 <---
---TOE2(3) --------->ICU4 --------->TGA1a       --------->O2<---------bZIP60(1)--------->TGA1a<-----
====================================bZIP_DOF    <---------O2<---------ANAC58 <---------ALFIN1 <-----
->AGL15<---------AHL20(1) --------->bZIP60(2)   --------->TGA1a      ----------->HVH21<---------ANAC46
--AGL15<---------ARR11(3) <---------TGA1a<---------ANAC46----------->HVH21<------NtERF2       <-----
 
tttccaacgatatatttattatccatcacacgtcaaagtttgcggcgagtctcgtcggtgatgacgtgccaattgacggcacacgcgcggcttagtagcg  3140700
        --------->At5g28300
       ----------->GT1
      ----------->GT1
------->ALFIN1
-----MYC2
---->MYC2
-----PIF5
---->PIF5                                       --------->LBD16
---->MYC3                                      <------NtERF2
-----MYC3                                      <---------ANAC46
------ANAC58                                   <---------LBD16
------ANAC46                               <-----------HVH21
----->ALFIN1                           --------->ARR11(3)           <-----------GT1
------ANAC58              <---------YAB1  <-----------RAV1(1)   --------->At5g28300
----ANAC58                <---------AHL20(2)  <---------LBD16  <---------MYB46(3)
----ANAC46            --------->YAB1 ----------->ARR10         ----------->GT1                    --
----ANAC58    <-----------GT1   <---------TOE2(3)           ------------>MYB.PH3(1) <-----------RAV1(1)
 
cgtgggaagagggtaaattactaaatcatattattgtggtaagatttgtcgcgggaatgagagaagcggttaaactttctaacttctatgttgggattta  3140800
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AGI:  At5g10030.1   
Description:  TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor. Identical to Transcription factor TGA4 (TGA4) [Arabidopsis Thaliana] (GB:Q39162;GB:Q9LX25); similar to TGA1, DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65210.3); similar to TGA1, DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65210.4); similar to TGA1, DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65210.5); similar to 80A08_2 [Brassica rapa subsp. pekinensis] (GB:AAZ67587.1); similar to 4D11_7 [Brassica rapa subsp. pekin
Range:  from: 3137324    to: 3140253    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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