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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ARR11(3)
<---------
ARR11(3)
--------->
YAB1
------->
YAB1
--------->
YAB1
-
TEIL
--------->
CCA1(2)
------->
GAMYB
->
CCA1(2)
--------->
AtMYB61
->
ARR14(1)
--------->
MYB46(3)
>
ARR14(2)
--------->
YAB1
--------->
ANAC58
--------->
At4g35610
-
GLK1(2)
<---------
ICU4
----------->
GT1
-------->
P
<---------
At4g35610
-
ARR14(2)
------>
MYB46(1)
<---------
ICU4
--------->
ANAC58
<---------
At5g28300
>
ARR11(1)
------>
MYB83
--------->
YAB1
--------->
ANAC46
---------->
DOF2
>
ARR10
<---------
MYB59
<---------
ATHB12
--------->
At4g35610
<-----------
GT1
---------
attataagatatagaaccaaattatcacatagcaaatcatgaaatggtatatcagaagcaaccatcagaataaaagttacagcttcaataagagaatgaa
3139900
--------->
ARR11(3)
------>
ZmHOX2a(2)
--------->
YAB1
<------
ZmHOX2a(2)
<---------
YAB1
---------
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
<---------
ARR11(3)
<----------
DOF2
--------->
ICU4
------->
GAMYB
--------->
ARR14(2)
<---------
DAG2
--------->
AtLEC2
--------->
MYB46(3)
--------->
AGP1
------->
TEIL
--------->
WOX13(1)
--------->
WOX13(1)
<---------
ARR14(2)
<-----------
GT1
---------->
DOF2
<---------
ARR11(3)
--------->
GLK1(1)
--------------->
AtSPL8
--------->
ARR11(3)
-------->
P
---------->
DOF2
------
---------->
DOF2
--------->
WRKY18(1)
--------->
YAB1
----------->
GT1
<---------
GLK1(1)
--------------->
ANAC81
<---------
RAP2.6(3)
<-------
TEIL
--------->
CCA1(2)
----------->
ARR10
acagagaaacacaaagtttgaacctttttttgcagtcaagcagagataatgatattcatatcaaccaagagatgaaaattcagaaagaagagagatccga
3140000
--------->
LBD16
<---------
LBD16
--------->
LBD16
>>>>>>>>>>
E2Ff
>>>>>>>>>>
E2Fd
>>>>>>>>>>
E2Fc
>>>>>>>>>>
E2Fe
>>>>>>>>>>
E2Fb
>>>>>>>>>>
E2Fa
<---------
DAG2
--------->
HSFB2a(1)
<----------
DOF2
--------->
AtLEC2
------->
TEIL
------->
TEIL
<---------
ARR14(2)
---------->
DOF2
<
>
CCA1(2)
---------->
DOF2
<----------
ID1
--------->
LBD16
----------->
GT1
<----
--->
LBD16
<----------
DOF2
---------->
DOF2
<---------
LBD16
---------->
DOF2
-------
agtcgaac
cttgttctggtcttttgtgtcaaaagggcttcaaaaaagacgaacttttcccgcggaaaccatgaaaagagaaaactaaagctagatgaact
3140100
<----------
CDC5
--------->
ANAC58
--------->
DEAR3(1)
--------->
ARR11(3)
<---------
At4g35610
<---------
ARR11(3)
<-----------
HVH21
--------->
ANAC58
<---------
At4g35610
--------->
At5g28300
<----------
DOF2
--------->
ANAC58
--------->
At4g35610
<------
MYB46(1)
-----------
GT1
--------->
SPL7
--------->
ARR14(2)
----------->
GT1
------
DOF2
--------->
ANAC58
<---------
ARR14(2)
--------->
MYB52(1)
-
>
TEIL
--------->
At4g35610
<---------
GLK1(1)
<---------
YAB1
<------
MYB83
<----
tttcactttcagcgacgaaatcgaacgctaagcctagaaatctgcagcttaaaccggtctgatagaataagggatggtaaaatctcgttctctgaacttg
3140200
*
TSS
---------->
DOF2
<---------
WOX13(1)
--------->
TOE2(3)
<------------
CBF
<---
<------
ZmHOX2a(1)
--------->
TOE1(3)
--------->
ATHB12
-----
<---------
HSFB2a(2)
--------->
ANAC46
<---------
YAB1
------>
ZmHOX2a(1)
--------->
HSFB2a(2)
--------->
WOX13(1)
<----------
DOF2
<----------
DOF2
<---------
ARR11(3)
-------->
At4g35610
--------->
GLK1(2)
--------->
ANAC58
--------->
ARR11(3)
<---------
CCA1(2)
-------
HVH21
>>>>>>>>>
TBF1
--------->
ANAC58
<---------
ARR11(3)
<-----------
GT1
tcatctcgaagaaggagaagaagaatcattcaagagagaacacgacaacttta
aaagagagacctttgattgagttttctaaatttttctatatcctaat
3140300
----------->
TBP
<---------
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<------------------------
ANAC81
--------->
YAB1
<-----------
GT1
<----------
DOF2
--------->
AHL20(2)
<---------
AHL20(2)
<-------
GAMYB
<---------
ARR11(3)
------------>
CBF
--------->
AHL20(2)
--------->
MYB52(2)
------>
ZmHOX2a(1)
<---
------
AHL20(2)
--------->
TOE2(3)
<---------
MYB46(3)
---------->
ID1
-----
---->
AHL20(2)
--------->
AHL20(2)
<---------
MYB52(1)
<---------
DEAR3(1)
---------------
aaatgtcaataaaaatatatatactaacatttatttctgtttttttttttggtttgttgattcttcggtgatatttgtcctttaagtatatgtactagat
3140400
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
ATHB51
--------->
AHL20(2)
<---------
ALFIN1
<----------
DOF2
<---------
AHL20(2)
--------->
At4g35610
--------->
TOE2(3)
--------->
AHL20(2)
<---------
At4g35610
--------->
ARR11(3)
<---------
AHL20(2)
----
TEIL
--------->
ICU4
<-------
TEIL
<---------
AHL20(2)
---->
CCA1(2)
------>
MYB83
<---------
ARR11(3)
--------->
AHL20(1)
>
AtSPL8
------>
MYB46(1)
<---------
TOE2(3)
--------->
AHL20(2)
<---------
AHL20(1)
--------
acatcagctacacagtcaaaaaccaaattttgacatgtttaagatacctttaagtccataatttattcgattactaatttaattttgtttctggttattc
3140500
<---------
ICU4
<--------
ATHB1
-------->
HAHB4
--------->
ICU4
<---------
ATHB51
--------->
ARR11(3)
<---------
YAB1
--------->
AHL20(1)
--------->
YAB1
--------->
YAB1
<---------
ICU4
<------
--------->
ANAC58
--------->
ICU4
<----------
DOF2
--------->
ANAC46
<---------
YAB1
============
<---------
ALFIN1
--------->
ANAC58
--------->
YAB1
--------------
->
KAN4(2)
<-----------
HVH21
<-----------
GT1
----------->
GT1
<-------------
tgtatttctctcatttgtcatgtctccactacctcgctgatgttacacaccaagtatattggaaaattattcagtaataataattcatactcttttaagt
3140600
<---------
ATERF1(2)
--------->
ATERF1(2)
<---------
ANAC46
<------
NtERF2
<------
NtERF2
<---------
ANAC55(1)
<---------
DEAR3(1)
------>
NtERF2
<---------
ANAC58
--------->
LBD16
<---------
RAP2.3(1)
<---------
ANAC55(2)
--------->
ANAC46
<-----------
HVH21
--------->
ANAC55(2)
<-------
MYC2
--------->
ANAC58
<---------
bZIP60(2)
------->
MYC3
--------->
ANAC46
--------->
bZIP60(1)
------->
MYC2
--------->
ANAC55(1)
<---------
At1g77200
--------->
bZIP60(1)
--------->
O2
<---------
RAP2.6(2)
<---------
TGA1a
<-------
MYC3
--
===============
bZIP_DOF
<---------
DEAR3(1)
<---------
bZIP60(1)
<--
<-----------
HVH21
<---------
RAP2.3(2)
--------->
TGA1a
--------->
ANAC58
---
--------->
ANAC46
<---------
DEAR3(1)
<---------
O2
--------->
ANAC46
<--
--------->
WOX13(1)
<---------
RRTF1(2)
<---------
TGA2(2)
--------->
ANAC46
---
<-----------
GT1
<---------
LBD16
<---------
DEAR3(2)
<---------
RAP2.3(3)
---
<---------
YAB1
========================================
bZIP_DOF
<---------
TGA1a
<--
<---------
AHL20(2)
============================
bZIP_DOF
--------->
RAP2.6(3)
<---
--------->
AHL20(2)
---------->
DOF2
<---------
TGA1a
--------->
MYB52(1)
<---
<---------
AHL20(2)
<---------
O2
<---------
ANAC46
----------->
TGA1
------>
NtERF2
----
--------->
AHL20(1)
--------->
ANAC58
======================
bZIP_bZIP
--------->
ANAC58
<---
---
TOE2(3)
--------->
ICU4
--------->
TGA1a
--------->
O2
<---------
bZIP60(1)
--------->
TGA1a
<-----
====================================
bZIP_DOF
<---------
O2
<---------
ANAC58
<---------
ALFIN1
<-----
->
AGL15
<---------
AHL20(1)
--------->
bZIP60(2)
--------->
TGA1a
----------->
HVH21
<---------
ANAC46
--
AGL15
<---------
ARR11(3)
<---------
TGA1a
<---------
ANAC46
----------->
HVH21
<------
NtERF2
<-----
tttccaacgatatatttattatccatcacacgtcaaagtttgcggcgagtctcgtcggtgatgacgtgccaattgacggcacacgcgcggcttagtagcg
3140700
--------->
At5g28300
----------->
GT1
----------->
GT1
------->
ALFIN1
-----
MYC2
---->
MYC2
-----
PIF5
---->
PIF5
--------->
LBD16
---->
MYC3
<------
NtERF2
-----
MYC3
<---------
ANAC46
------
ANAC58
<---------
LBD16
------
ANAC46
<-----------
HVH21
----->
ALFIN1
--------->
ARR11(3)
<-----------
GT1
------
ANAC58
<---------
YAB1
<-----------
RAV1(1)
--------->
At5g28300
----
ANAC58
<---------
AHL20(2)
<---------
LBD16
<---------
MYB46(3)
----
ANAC46
--------->
YAB1
----------->
ARR10
----------->
GT1
--
----
ANAC58
<-----------
GT1
<---------
TOE2(3)
------------>
MYB.PH3(1)
<-----------
RAV1(1)
cgtgggaagagggtaaattactaaatcatattattgtggtaagatttgtcgcgggaatgagagaagcggttaaactttctaacttctatgttgggattta
3140800
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AGI:
At5g10030.1
Description:
TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor. Identical to Transcription factor TGA4 (TGA4) [Arabidopsis Thaliana] (GB:Q39162;GB:Q9LX25); similar to TGA1, DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65210.3); similar to TGA1, DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65210.4); similar to TGA1, DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65210.5); similar to 80A08_2 [Brassica rapa subsp. pekinensis] (GB:AAZ67587.1); similar to 4D11_7 [Brassica rapa subsp. pekin
Range:
from: 3137324
to: 3140253
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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