Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                      --------->AHL20(2)                                                      -------                      <---------AHL20(2)                                                   --------->ANAC58                     --------->AHL20(2)                                                    --------->ANAC58              -------->ATHB1                                                               --------->ANAC46 -----------HVH21 --------->YAB1                                                         --------->ANAC46 -----WRKY12  --------->AHL20(2)                                                         <---------ALFIN1 --->DOF5.7(2)--------->ATHB51                                                 --------------->AtSPL3 --O2        <---------ATHB51                                          <---------LBD16--------->ZAT14 ->O2        <---------ATHB12   ---------->DOF2                    --------->ATHB12   <---------ZAT14 ---STF1     --------->ICU4 --------->At4g35610            <----------DOF2     --------------->AtSPL8   aacttcacaggtccaattattcataaaattagatgaaagccttgatgcttctactcgattcctttgaagtaattggggaaaacagtactacacacaccac  2519800                                                                                                   <-                                                                                                 ----                                                                               <---------REM1(2)<----                                                --------->DAG2                 --------->SPL7   <----                            <---------ICU4     ---------->DOF2               --------->ZAT18---------                      ----------->GT1----------->RAV1(1)                     <---------ZAT18---------                      <------ZmHOX2a(1)  ---------->DOF2         <---------AHL20(2) --------->ANAC58                     ----------->GT1 --------->TOE2(3)          --------->AHL20(2)  --------->ANAC58- ------->STY1(2) <---------MYB52(2)  ------->GAMYB              <---------AHL20(2)--------->ANAC46--- -->AtMYB61   --------->MYB46(3)    --------->MYB46(3)   --------->ANAC46    <---------SPL7 ---------   tagatagccaatttcaacaacgaaggataaaaattgcaaccacaaaagaaaaagcgaacacgagaataaaattgatgagcgtacacacgaatacaagccc  2519900      --------->WRKY12     --------->DOF5.7(2)    --------->TOE2(3)                                    <---------ANAC46 -----ZmHOX2a(1)                                        <---------LBD16 ----->LBD16                                       <---------ARR14(2) -----LBD16                                        --------->ARR14(2)                        *TSS --- -------RAV1(2)                                <------NtERF2                           ------>ZmHOX2a(1) >ANAC58         <---------At4g35610          ------>NtERF2         <---------YAB1   ------>ZmHOX2a(2) >ANAC58         <---------ZAT2              <---------DEAR3(1)  --------->ICU4    <---------ARR14(2) -------->ARR14(2)                          --------->SPL7--------->LBD16          --------->ARR11(3) ------>ANAC46   --------->At4g35610      ----------->HVH21<------NtERF2           --------->ARR14(2) >ANAC46         --------->ZAT2--------------------->WRI1--------->ETT(1)          <---------ARR11(3)   aggaaacgtttaccttcgcagctcaatccctctctgagataattccgacggcgaatttgccggagaaatgatgtttgaatttgatgatcctccaaaaaaa  2520000                                                                                                   <-                                                                                                   <-                                                                                                 <---                                                                                           <---------                                                                                           <---------MYB52(1)                                                                                        <---------LBD16                                                                                   <---------WRKY38(1)                                                                                   <---------WRKY12<-                                                                                  ------------>CBF <-                                                                                  --------->WRKY18(1)                                        ----------->GT1                          <--------ZAP1<------                               <---------ZAT2 <---------ICU4                     <-----------HVH21<--            <---------MYB52(1)------>NtERF2  --------->ICU4                     --------->LBD16 <---- ------>AHL20(2)           ------>NtERF2<---------ANAC55(2)<----------DOF2    <---------LBD16 <------   aaaaatgtctctcggtttcttcgaagcgatgccagcccagataagtaaaaatgactctctgctttgtttaaaaaacaaaacccggtcaattccggtcggg  2520100 <---------ARR14(2)                                                                          -------- --------->ARR14(2)                                                                          -------- --------MYB46(3)                                                                            -------- -----MYB83                                                           *TSS                 <-------GAMYB -----P--------->WRKY18(1)                                          ------------>CBF      <---------DEAR3(2) --HVH21                        <------MYB83                       --------->ANAC58       <---------SPL7 --------DEAR3(2)           <---------ARR14(2)                     --------->ANAC58       <---------MYB46(3) -----MYB46(1)              --------->ARR14(2)            <---------RVE1(1)              <---------ANAC58 ---DEAR3(2)            <---------LBD16                  <---------GLK1(2)               <---------DREB2C(2) -------DEAR3(1)   --------->ICU4                        --------->ARR11(3)              <---------RAP2.6(2) -------HVH21      <---------YAB1          <---------ZAT6<---------ARR11(3)              <---------ANAC58 ---MYB46(3)  ----------->GT1   <------MYB46(1)         <---------RVE1(1)           <---------ICU4   tcggttcgggtcaaactagttattatttcggatttggtttatgtactgtgagagtgagagatttttagtaagcaatccctctctagtaatggcggtcgca  2520200                                                          <---------HSFC1(2)                                                   <---------O2     --------->AtMYB61     --------->ANAC58                           --------->TOE1(2)<---------ALFIN1     --------->At4g35610     --------->ANAC46                      <---------AHL20(2) --------->REM1(1)  --------->YAB1     --------->ANAC58                --------->ANAC55(2)  <---------HSFB2a(1)  --------->ANAC58 --------->TOE2(3)                   --------->ANAC58     --------->At4g35610  --------->ANAC58  <--- ->RAP2.6(2)                         --------->ANAC46     --------->HSFC1(2)--------->TOE2(3)   ----- ->ANAC58                            --------->ANAC58  <------ZmHOX2a(1)    <---------MYB59     ----- ->ANAC58 --------->O2------->TEIL------>ZmHOX2a(1)--------->O2 --------->MYB46(3)  --------->ATHB12   atacctcaagccacttctcttacgaacctcgtcttcctcacgaaattaatcccacgaggaagcttcaccaccatactacctaagcatcatcggaaaccaa  2520300                                              <---------ALFIN1                                            --------->ANAC46    --------->ARR14(2)                      --------->ANAC58               ----------->RAV1(1)    <---------ARR14(2)                      --------->ANAC58     --------->YAB1 ------ATHB12                             <---------ALFIN1    ---------->DOF2                     --- ->MYB83                               --------->MYB46(3)  --------->TOE1(3)                  <------ ->MYB46(1)              <-----------GT1------->GAMYB      --------->TOE2(3)  ------->GAMYB ------>ZmHOX2a(1)   tcttcgtattctctctccagactcaattttcttctccagtaaccacactcacctccaaaaaccctaaagatgatgagcaacagcaaaaactctccttcac  2520400                                                --------->ARR14(2)                                            <------NtERF2                                           ------>NtERF2                                          <---------ALFIN1                                          --------->DEAR3(1)                                         --------->MYB46(3)       <---------DAG2                   --------->LBD16       --------->TOE2(3)            <---------ARR14(2)                                  ------>MYB83       --------->TOE1(3)            --------->GLK1(2)                                   ------>MYB46(1)    ------->GAMYB                   --------->ARR14(2)                   <-------TEIL <---------MYB59   --------->MYB46(3)              <---------ARR14(2)                  <---------GLK1(2)----------->RAV1(1)   <---------MYB46(2)              --------->ARR14(2)                  --------->ARR14(2) <---------ALFIN1   <---------MYB111(2)             <---------GLK1(2)         <---------ARR11(3)       --------->MYB46(3) ------>ANAC46        --------->ZAT18   ------>NtERF2        --------->ARR11(3)       <---------MYB55(2) ---ALFIN1            <---------ZAT18  --------->ANAC46     <---------At4g35610   --------->MYB46(3)   cctcaactaccttatcgactcatgtggactatctccagattccgccaccgtagcctctcgtaagctcttactagattcaccagaacgacccaacacagtt  2520500                                                                                                    -                                    <-----------ARR10                                               -                                   <---------CCA1(2)                                                -                              --------->At4g35610                                                   -                              <---------At4g35610                                                  --                              --------->ZAT2                       --------------->AGL15         ----                          --------->AtMYB61                        <---------------AGL15        <----                          <---------ALFIN1              <---------HSFC1(2)                    ------>ZmHOX2a(1)                         --------->ANAC46               --------->HSFC1(2)            ------->TEIL <-                       <-----------GT1              --------->ANAC58                  --------->ARR14(2)                    --------->ARR14(2)    <---------CCA1(2)   ------>ZmHOX2a(1)       <---------ARR14(2)           ----------->HVH21  <---------ZAT2        --------->ANAC58                  --------->GLK1(2)   ctcaaccttcttcgtgaccatggattcaccacagctcaaatctcatctctcgtcaagaaacgtcctgttctcttattagccaatgctgaatctgtcctcc  2520600          <---------GLK1(2)         <---------ZAT2         <---------At4g35610         --------->At4g35610   <-----------ARR10 --------->LBD16                                                                                    < -------->ANAC58                                 --------->HSFB2a(2)                   ------>ZmHOX2a(2) -------->LBD16                             <---------ANAC58            <---------ATHB12            - -------->ANAC58                            <---------ANAC58            --------->MYB46(3)     ------ -------->ANAC46                        <----------DOF2                -------->P    <---------ARR14(2) ------->HSFB2a(2)                     <---------ICU4                  ------>MYB46(1)<------ZmHOX2a(2) -->ZmHOX2a(1)                       --------->GLK1(2)              ------>ZmHOX2a(2)--------->ARR14(2) -----ALFIN1  <----------DOF2        <---------ARR11(3)    <---------At4g35610       --------->ARR11(3) --------HSFB2a(2)                   --------->ARR11(3)<----------DOF2 ------>MYB83  <---------ARR11(3)   tcccgaaactcagcttctttctctcaattggtgtctcaaaatctttacttgctcgaactttagcttctgatccaaccattttgactagatcccttgttaa  2520700  Previous    Next  AGI:  At5g07890.1    Description:  myosin heavy chain-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64487.1); contains domain Spectrin repeat (SSF46966) Range:  from: 2517382    to: 2519993    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g07900.1    Description:  mitochondrial transcription termination factor family protein / mTERF family protein. similar to mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] (TAIR:AT1G21150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 2520170    to: 2521547    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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